RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 DNAH10Q8IVF4 4471 aa3.7□□□□□ -1.82
SUDS3-202ENST00000541280 DNAH2Q9P225 4427 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 FRAS1Q86XX4 4008 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 FAT2Q9NYQ8 4349 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 IGLV4-60A0A075B6I1 120 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 C7orf77A4D0Y5 90 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 C9JQL5 133 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 HLA-DQA1P01909 254 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 MT-ND4LP03901 98 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 INAFM2P0DMQ5 153 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 FGF6P10767 208 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 FUSP35637 526 aaKnown RBP eCLIP3.69□□□□□ -1.82
SUDS3-202ENST00000541280 CNBPP62633 177 aaKnown RBP3.69□□□□□ -1.82
SUDS3-202ENST00000541280 WFDC2Q14508 124 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 SS18Q15532 418 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 RNASEKQ6P5S7 137 aaKnown RBP3.69□□□□□ -1.82
SUDS3-202ENST00000541280 KRTAP26-1Q6PEX3 210 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 MRPL52Q86TS9 123 aaKnown RBP3.69□□□□□ -1.82
SUDS3-202ENST00000541280 AMN1Q8IY45 258 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 RNF185Q96GF1 192 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 CHAC1Q9BUX1 264 aa3.69□□□□□ -1.82
SUDS3-202ENST00000541280 CKS2P33552 79 aa3.68□□□□□ -1.82
SUDS3-202ENST00000541280 CAMPP49913 170 aa3.68□□□□□ -1.82
SUDS3-202ENST00000541280 HBBP68871 147 aa3.68□□□□□ -1.82
SUDS3-202ENST00000541280 CLLU1Q5K131 121 aa3.68□□□□□ -1.82
SUDS3-202ENST00000541280 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
SUDS3-202ENST00000541280 Q5VSD8 79 aa3.68□□□□□ -1.82
SUDS3-202ENST00000541280 UQCC3Q6UW78 93 aa3.68□□□□□ -1.82
SUDS3-202ENST00000541280 ZNF664Q8N3J9 261 aa3.68□□□□□ -1.82
SUDS3-202ENST00000541280 CHCHD10Q8WYQ3 142 aaPredicted RBP3.68□□□□□ -1.82
SUDS3-202ENST00000541280 TIMM21Q9BVV7 248 aa3.68□□□□□ -1.82
SUDS3-202ENST00000541280 CDC42SE2Q9NRR3 84 aa3.68□□□□□ -1.82
SUDS3-202ENST00000541280 LAMTOR2Q9Y2Q5 125 aa3.68□□□□□ -1.82
SUDS3-202ENST00000541280 IGLV10-54A0A075B6I4 117 aa3.67□□□□□ -1.82
SUDS3-202ENST00000541280 IGHV3-64A0A075B6Q5 118 aa3.67□□□□□ -1.82
SUDS3-202ENST00000541280 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.67□□□□□ -1.82
SUDS3-202ENST00000541280 LINC00959A0A1B0GUT2 108 aa3.67□□□□□ -1.82
SUDS3-202ENST00000541280 IGKV2-29A2NJV5 120 aaPredicted RBP3.67□□□□□ -1.82
SUDS3-202ENST00000541280 C1orf196B1AJZ1 125 aa3.67□□□□□ -1.82
SUDS3-202ENST00000541280 SMR3BP02814 79 aaPredicted RBP3.67□□□□□ -1.82
SUDS3-202ENST00000541280 RAB5AP20339 215 aa3.67□□□□□ -1.82
SUDS3-202ENST00000541280 G0S2P27469 103 aa3.67□□□□□ -1.82
SUDS3-202ENST00000541280 MRPL51Q4U2R6 128 aaKnown RBP3.67□□□□□ -1.82
SUDS3-202ENST00000541280 CLPSL2Q6UWE3 100 aa3.67□□□□□ -1.82
SUDS3-202ENST00000541280 CD164L2Q6UWJ8 174 aa3.67□□□□□ -1.82
SUDS3-202ENST00000541280 ORMDL3Q8N138 153 aa3.67□□□□□ -1.82
SUDS3-202ENST00000541280 DEFB104AQ8WTQ1 72 aa3.67□□□□□ -1.82
SUDS3-202ENST00000541280 DPH3Q96FX2 82 aa3.67□□□□□ -1.82
SUDS3-202ENST00000541280 IMMP2LQ96T52 175 aa3.67□□□□□ -1.82
SUDS3-202ENST00000541280 TMEM242Q9NWH2 141 aa3.67□□□□□ -1.82
SUDS3-202ENST00000541280 LINC00474Q9P2X8 69 aa3.67□□□□□ -1.82
SUDS3-202ENST00000541280 DNAH11Q96DT5 4516 aa3.66□□□□□ -1.82
SUDS3-202ENST00000541280 IGHV1-58A0A0C4DH39 117 aa3.66□□□□□ -1.82
SUDS3-202ENST00000541280 IGKV3OR2-268A0A0C4DH90 116 aa3.66□□□□□ -1.82
SUDS3-202ENST00000541280 A0A1B0GXF2 115 aa3.66□□□□□ -1.82
SUDS3-202ENST00000541280 K7EMI3 77 aa3.66□□□□□ -1.82
SUDS3-202ENST00000541280 RPS10P46783 165 aaKnown RBP3.66□□□□□ -1.82
SUDS3-202ENST00000541280 SDIM1Q6ZPB5 146 aa3.66□□□□□ -1.82
SUDS3-202ENST00000541280 TMEM136Q6ZRR5 245 aa3.66□□□□□ -1.82
SUDS3-202ENST00000541280 SCXQ7RTU7 201 aa3.66□□□□□ -1.82
SUDS3-202ENST00000541280 CIRBP-AS1Q8TBR5 109 aa3.66□□□□□ -1.82
SUDS3-202ENST00000541280 SPANXA1Q9NS26 97 aa3.66□□□□□ -1.82
SUDS3-202ENST00000541280 DNAH17Q9UFH2 4485 aa3.66□□□□□ -1.82
SUDS3-202ENST00000541280 TRAV9-1A0A075B6T8 112 aa3.65□□□□□ -1.83
SUDS3-202ENST00000541280 GVQW2A0A096LPI5 108 aaPredicted RBP3.65□□□□□ -1.83
SUDS3-202ENST00000541280 F8WDY8 70 aa3.65□□□□□ -1.83
SUDS3-202ENST00000541280 APOMO95445 188 aa3.65□□□□□ -1.83
SUDS3-202ENST00000541280 MRPS36P82909 103 aaKnown RBP3.65□□□□□ -1.83
SUDS3-202ENST00000541280 MRPL54Q6P161 138 aaKnown RBP3.65□□□□□ -1.83
SUDS3-202ENST00000541280 UBE2D4Q9Y2X8 147 aa3.65□□□□□ -1.83
SUDS3-202ENST00000541280 HERC2O95714 4834 aa3.65□□□□□ -1.83
SUDS3-202ENST00000541280 TMEM218A2RU14 115 aa3.64□□□□□ -1.83
SUDS3-202ENST00000541280 LINC01549A6NIU2 74 aa3.64□□□□□ -1.83
SUDS3-202ENST00000541280 D6R8Y8 96 aa3.64□□□□□ -1.83
SUDS3-202ENST00000541280 SMKR1H3BMG3 65 aa3.64□□□□□ -1.83
SUDS3-202ENST00000541280 COX7A2LO14548 114 aa3.64□□□□□ -1.83
SUDS3-202ENST00000541280 XCL1P47992 114 aa3.64□□□□□ -1.83
SUDS3-202ENST00000541280 CIRBPQ14011 172 aaKnown RBP3.64□□□□□ -1.83
SUDS3-202ENST00000541280 COX19Q49B96 90 aa3.64□□□□□ -1.83
SUDS3-202ENST00000541280 LINC01620Q4KN68 170 aa3.64□□□□□ -1.83
SUDS3-202ENST00000541280 PRELID3AQ96N28 172 aa3.64□□□□□ -1.83
SUDS3-202ENST00000541280 SMIM2Q9BVW6 85 aa3.64□□□□□ -1.83
SUDS3-202ENST00000541280 MAP1LC3AQ9H492 121 aa3.64□□□□□ -1.83
SUDS3-202ENST00000541280 S100PP25815 95 aa3.63□□□□□ -1.83
SUDS3-202ENST00000541280 IFI27P40305 119 aaPredicted RBP3.63□□□□□ -1.83
SUDS3-202ENST00000541280 SNRPEP62304 92 aaKnown RBP3.63□□□□□ -1.83
SUDS3-202ENST00000541280 ORMDL2Q53FV1 153 aa3.63□□□□□ -1.83
SUDS3-202ENST00000541280 C15orf56Q8N910 161 aa3.63□□□□□ -1.83
SUDS3-202ENST00000541280 SEC11CQ9BY50 192 aa3.63□□□□□ -1.83
SUDS3-202ENST00000541280 NXT2Q9NPJ8 142 aaKnown RBP3.63□□□□□ -1.83
SUDS3-202ENST00000541280 KIAA1109Q2LD37 5005 aa3.63□□□□□ -1.83
SUDS3-202ENST00000541280 PKHD1P08F94 4074 aa3.63□□□□□ -1.83
SUDS3-202ENST00000541280 PKD1P98161 4303 aa3.62□□□□□ -1.83
SUDS3-202ENST00000541280 IGLV4-69A0A075B6H9 119 aa3.62□□□□□ -1.83
SUDS3-202ENST00000541280 TRAV13-1A0A0B4J241 112 aa3.62□□□□□ -1.83
SUDS3-202ENST00000541280 OXTP01178 125 aa3.62□□□□□ -1.83
SUDS3-202ENST00000541280 NPYP01303 97 aa3.62□□□□□ -1.83
SUDS3-202ENST00000541280 RPL37AP61513 92 aaKnown RBP3.62□□□□□ -1.83
SUDS3-202ENST00000541280 SYCNQ0VAF6 134 aa3.62□□□□□ -1.83
SUDS3-202ENST00000541280 Q6ZN92 141 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms