RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 FBXL19-AS1Q494R0 122 aa7.41□□□□□ -1.22
TRERF1-205ENST00000541110 ATP5EP2Q5VTU8 51 aa7.4□□□□□ -1.22
TRERF1-205ENST00000541110 C6orf223Q8N319 242 aa7.4□□□□□ -1.22
TRERF1-205ENST00000541110 NDUFC1O43677 76 aa7.4□□□□□ -1.22
TRERF1-205ENST00000541110 ATP5EP56381 51 aaPredicted RBP7.4□□□□□ -1.22
TRERF1-205ENST00000541110 CELA1Q9UNI1 258 aa7.4□□□□□ -1.22
TRERF1-205ENST00000541110 NUPR1O60356 82 aa7.4□□□□□ -1.23
TRERF1-205ENST00000541110 PRLHP81277 87 aa7.4□□□□□ -1.23
TRERF1-205ENST00000541110 C2orf48Q96LS8 159 aa7.4□□□□□ -1.23
TRERF1-205ENST00000541110 COX17Q14061 63 aa7.39□□□□□ -1.23
TRERF1-205ENST00000541110 UQCRQO14949 82 aa7.39□□□□□ -1.23
TRERF1-205ENST00000541110 C10orf91Q5T1B1 145 aa7.39□□□□□ -1.23
TRERF1-205ENST00000541110 LINC00959A0A1B0GUT2 108 aa7.39□□□□□ -1.23
TRERF1-205ENST00000541110 CDPF1Q6NVV7 123 aa7.39□□□□□ -1.23
TRERF1-205ENST00000541110 ZNF702PQ9H963 129 aa7.39□□□□□ -1.23
TRERF1-205ENST00000541110 SMIM11BQ8TCY0 68 aa7.39□□□□□ -1.23
TRERF1-205ENST00000541110 A8MZ25 164 aa7.38□□□□□ -1.23
TRERF1-205ENST00000541110 C7orf65Q6ZTY9 151 aa7.38□□□□□ -1.23
TRERF1-205ENST00000541110 TRIAP1O43715 76 aa7.38□□□□□ -1.23
TRERF1-205ENST00000541110 KRTAP27-1Q3LI81 207 aa7.38□□□□□ -1.23
TRERF1-205ENST00000541110 PCOTHQ58A44 107 aa7.38□□□□□ -1.23
TRERF1-205ENST00000541110 TIMM17BO60830 172 aa7.38□□□□□ -1.23
TRERF1-205ENST00000541110 ZNF73O43830 326 aaPredicted RBP7.37□□□□□ -1.23
TRERF1-205ENST00000541110 PSMG3-AS1Q96PY0 264 aa7.37□□□□□ -1.23
TRERF1-205ENST00000541110 ZFHX2Q9C0A1 2572 aaPredicted RBP7.37□□□□□ -1.23
TRERF1-205ENST00000541110 LIMD2Q9BT23 127 aa7.37□□□□□ -1.23
TRERF1-205ENST00000541110 M0QY20 66 aa7.37□□□□□ -1.23
TRERF1-205ENST00000541110 FRMD6-AS1P0C7T7 363 aa7.37□□□□□ -1.23
TRERF1-205ENST00000541110 HIVEP3Q5T1R4 2406 aa7.36□□□□□ -1.23
TRERF1-205ENST00000541110 A0A1W2PNU3 283 aaPredicted RBP7.36□□□□□ -1.23
TRERF1-205ENST00000541110 WISP2O76076 250 aa7.36□□□□□ -1.23
TRERF1-205ENST00000541110 DEFB116Q30KQ4 102 aa7.36□□□□□ -1.23
TRERF1-205ENST00000541110 COA6Q5JTJ3 125 aaKnown RBP7.36□□□□□ -1.23
TRERF1-205ENST00000541110 LINC00208Q96KT6 92 aa7.36□□□□□ -1.23
TRERF1-205ENST00000541110 Q9BRP9 147 aa7.36□□□□□ -1.23
TRERF1-205ENST00000541110 LINC01547P58512 204 aaPredicted RBP7.36□□□□□ -1.23
TRERF1-205ENST00000541110 CYSRT1A8MQ03 144 aa7.36□□□□□ -1.23
TRERF1-205ENST00000541110 CSDC2Q9Y534 153 aaKnown RBP7.36□□□□□ -1.23
TRERF1-205ENST00000541110 IGKV2D-30A0A075B6S6 120 aa7.35□□□□□ -1.23
TRERF1-205ENST00000541110 FAM229AH3BQW9 127 aa7.35□□□□□ -1.23
TRERF1-205ENST00000541110 IGKV2-30P06310 120 aa7.35□□□□□ -1.23
TRERF1-205ENST00000541110 CCDC168Q8NDH2 2452 aa7.35□□□□□ -1.23
TRERF1-205ENST00000541110 NAV3Q8IVL0 2385 aa7.35□□□□□ -1.23
TRERF1-205ENST00000541110 J3QL48 77 aa7.35□□□□□ -1.23
TRERF1-205ENST00000541110 ZNF22P17026 224 aaPredicted RBP7.35□□□□□ -1.23
TRERF1-205ENST00000541110 MRGPRG-AS1Q2M3A8 158 aa7.35□□□□□ -1.23
TRERF1-205ENST00000541110 PYGO1Q9Y3Y4 419 aa7.34□□□□□ -1.23
TRERF1-205ENST00000541110 SERTAD4-AS1Q5TG53 156 aa7.34□□□□□ -1.23
TRERF1-205ENST00000541110 C9orf116Q5BN46 136 aaPredicted RBP7.34□□□□□ -1.24
TRERF1-205ENST00000541110 EBI3Q14213 229 aa7.33□□□□□ -1.24
TRERF1-205ENST00000541110 MT-ATP8P03928 68 aa7.33□□□□□ -1.24
TRERF1-205ENST00000541110 MSMPQ1L6U9 139 aa7.33□□□□□ -1.24
TRERF1-205ENST00000541110 SPACA4Q8TDM5 124 aa7.33□□□□□ -1.24
TRERF1-205ENST00000541110 GPR179Q6PRD1 2367 aa7.32□□□□□ -1.24
TRERF1-205ENST00000541110 Q6ZTC4 211 aa7.32□□□□□ -1.24
TRERF1-205ENST00000541110 LTBP2Q14767 1821 aa7.32□□□□□ -1.24
TRERF1-205ENST00000541110 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.32□□□□□ -1.24
TRERF1-205ENST00000541110 BEAN1Q3B7T3 259 aa7.32□□□□□ -1.24
TRERF1-205ENST00000541110 TRBV30A0A0K0K1B3 111 aa7.31□□□□□ -1.24
TRERF1-205ENST00000541110 COX6A2Q02221 97 aa7.31□□□□□ -1.24
TRERF1-205ENST00000541110 PMAIP1Q13794 54 aa7.31□□□□□ -1.24
TRERF1-205ENST00000541110 Q6ZS46 218 aa7.31□□□□□ -1.24
TRERF1-205ENST00000541110 CRYGAP11844 174 aa7.31□□□□□ -1.24
TRERF1-205ENST00000541110 H0Y9P7 68 aa7.3□□□□□ -1.24
TRERF1-205ENST00000541110 COL4A3Q01955 1670 aa7.3□□□□□ -1.24
TRERF1-205ENST00000541110 RNF185Q96GF1 192 aa7.3□□□□□ -1.24
TRERF1-205ENST00000541110 UNQ6190/PRO20217Q6UXQ8 127 aa7.3□□□□□ -1.24
TRERF1-205ENST00000541110 hDV103S1A0JD37 113 aa7.29□□□□□ -1.24
TRERF1-205ENST00000541110 TSHBP01222 138 aa7.29□□□□□ -1.24
TRERF1-205ENST00000541110 DOPEY1Q5JWR5 2465 aa7.29□□□□□ -1.24
TRERF1-205ENST00000541110 NHLRC4P0CG21 123 aaPredicted RBP7.29□□□□□ -1.24
TRERF1-205ENST00000541110 PRR3P79522 188 aaKnown RBP7.29□□□□□ -1.24
TRERF1-205ENST00000541110 Q8IZM0 81 aa7.29□□□□□ -1.24
TRERF1-205ENST00000541110 MRPS12O15235 138 aaKnown RBP7.28□□□□□ -1.24
TRERF1-205ENST00000541110 RNASE3P12724 160 aaKnown RBP7.28□□□□□ -1.24
TRERF1-205ENST00000541110 HCG22E2RYF7 251 aa7.28□□□□□ -1.24
TRERF1-205ENST00000541110 C11orf71Q6IPW1 123 aa7.28□□□□□ -1.24
TRERF1-205ENST00000541110 C1orf195Q5TG92 126 aa7.27□□□□□ -1.25
TRERF1-205ENST00000541110 EP400Q96L91 3159 aa7.27□□□□□ -1.25
TRERF1-205ENST00000541110 CRIP2P52943 208 aaPredicted RBP7.27□□□□□ -1.25
TRERF1-205ENST00000541110 SOSTDC1Q6X4U4 206 aa7.27□□□□□ -1.25
TRERF1-205ENST00000541110 NDUFA7O95182 113 aa7.27□□□□□ -1.25
TRERF1-205ENST00000541110 TRBV10-3A0A0K0K1G6 114 aa7.27□□□□□ -1.25
TRERF1-205ENST00000541110 MAPKAPK5-AS1Q8N8E1 139 aa7.27□□□□□ -1.25
TRERF1-205ENST00000541110 PSPHP1O15172 72 aa7.27□□□□□ -1.25
TRERF1-205ENST00000541110 C16orf90A8MZG2 172 aa7.26□□□□□ -1.25
TRERF1-205ENST00000541110 COX6B2Q6YFQ2 88 aa7.25□□□□□ -1.25
TRERF1-205ENST00000541110 CRIP1P50238 77 aa7.25□□□□□ -1.25
TRERF1-205ENST00000541110 Q6JHZ5 121 aa7.25□□□□□ -1.25
TRERF1-205ENST00000541110 LRRK2Q5S007 2527 aa7.25□□□□□ -1.25
TRERF1-205ENST00000541110 RNASE8Q8TDE3 154 aaKnown RBP7.25□□□□□ -1.25
TRERF1-205ENST00000541110 MBD6Q96DN6 1003 aa7.24□□□□□ -1.25
TRERF1-205ENST00000541110 CDC42SE2Q9NRR3 84 aa7.24□□□□□ -1.25
TRERF1-205ENST00000541110 LINC00575Q6W349 94 aa7.24□□□□□ -1.25
TRERF1-205ENST00000541110 COL27A1Q8IZC6 1860 aaPredicted RBP7.24□□□□□ -1.25
TRERF1-205ENST00000541110 MRPS36P82909 103 aaKnown RBP7.24□□□□□ -1.25
TRERF1-205ENST00000541110 A0A087WSZ3 146 aa7.24□□□□□ -1.25
TRERF1-205ENST00000541110 EGFEM1PQ0D2K5 195 aa7.24□□□□□ -1.25
TRERF1-205ENST00000541110 Q8N814 137 aa7.23□□□□□ -1.25
TRERF1-205ENST00000541110 MDFIQ99750 246 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms