RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 IGHV3OR16-9A0A0B4J2B5 98 aa10.13□□□□□ -0.79
DDB1-218ENST00000540784 SERF1AO75920 110 aa10.13□□□□□ -0.79
DDB1-218ENST00000540784 GCSHP23434 173 aa10.13□□□□□ -0.79
DDB1-218ENST00000540784 COX6A2Q02221 97 aa10.13□□□□□ -0.79
DDB1-218ENST00000540784 PMVKQ15126 192 aa10.13□□□□□ -0.79
DDB1-218ENST00000540784 C15orf56Q8N910 161 aa10.13□□□□□ -0.79
DDB1-218ENST00000540784 CST9LQ9H4G1 147 aa10.13□□□□□ -0.79
DDB1-218ENST00000540784 A6NJY4 79 aa10.12□□□□□ -0.79
DDB1-218ENST00000540784 HIST1H2BKO60814 126 aa10.12□□□□□ -0.79
DDB1-218ENST00000540784 HIST1H2BJP06899 126 aa10.12□□□□□ -0.79
DDB1-218ENST00000540784 HIST1H2BOP23527 126 aa10.12□□□□□ -0.79
DDB1-218ENST00000540784 HIST1H2BBP33778 126 aa10.12□□□□□ -0.79
DDB1-218ENST00000540784 NDUFA6P56556 154 aa10.12□□□□□ -0.79
DDB1-218ENST00000540784 HIST1H2BDP58876 126 aa10.12□□□□□ -0.79
DDB1-218ENST00000540784 HIST1H2BCP62807 126 aa10.12□□□□□ -0.79
DDB1-218ENST00000540784 SEC11AP67812 179 aa10.12□□□□□ -0.79
DDB1-218ENST00000540784 HIST2H2BEQ16778 126 aa10.12□□□□□ -0.79
DDB1-218ENST00000540784 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.12□□□□□ -0.79
DDB1-218ENST00000540784 FAM19A2Q8N3H0 131 aa10.12□□□□□ -0.79
DDB1-218ENST00000540784 HIST1H2BHQ93079 126 aa10.12□□□□□ -0.79
DDB1-218ENST00000540784 HIST1H2BNQ99877 126 aa10.12□□□□□ -0.79
DDB1-218ENST00000540784 HIST1H2BMQ99879 126 aa10.12□□□□□ -0.79
DDB1-218ENST00000540784 APOMO95445 188 aa10.11□□□□□ -0.79
DDB1-218ENST00000540784 HIGD2BQ4VC39 106 aa10.11□□□□□ -0.79
DDB1-218ENST00000540784 FAM19A3Q7Z5A8 133 aa10.11□□□□□ -0.79
DDB1-218ENST00000540784 GVQW2A0A096LPI5 108 aaPredicted RBP10.1□□□□□ -0.79
DDB1-218ENST00000540784 NUPR1O60356 82 aa10.1□□□□□ -0.79
DDB1-218ENST00000540784 GEMIN7Q9H840 131 aaKnown RBP10.1□□□□□ -0.79
DDB1-218ENST00000540784 A0A0J9YXV3 536 aa10.09□□□□□ -0.79
DDB1-218ENST00000540784 ZNF561-AS1K7EIQ3 104 aa10.09□□□□□ -0.79
DDB1-218ENST00000540784 LINC00310P59036 64 aa10.09□□□□□ -0.79
DDB1-218ENST00000540784 HERVK_113P63121 156 aa10.09□□□□□ -0.79
DDB1-218ENST00000540784 A0A087WZ39 114 aa10.08□□□□□ -0.8
DDB1-218ENST00000540784 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.08□□□□□ -0.8
DDB1-218ENST00000540784 IFI27L1Q96BM0 104 aa10.08□□□□□ -0.8
DDB1-218ENST00000540784 PKHD1P08F94 4074 aa10.07□□□□□ -0.8
DDB1-218ENST00000540784 IGHV3-64A0A075B6Q5 118 aa10.07□□□□□ -0.8
DDB1-218ENST00000540784 TINCRA0A1B0GVN0 87 aa10.07□□□□□ -0.8
DDB1-218ENST00000540784 LEPROTL1O95214 131 aa10.07□□□□□ -0.8
DDB1-218ENST00000540784 SLPIP03973 132 aa10.07□□□□□ -0.8
DDB1-218ENST00000540784 KRTAP10-1P60331 282 aa10.07□□□□□ -0.8
DDB1-218ENST00000540784 CNBPP62633 177 aaKnown RBP10.07□□□□□ -0.8
DDB1-218ENST00000540784 LINC01561Q8N1V8 128 aa10.07□□□□□ -0.8
DDB1-218ENST00000540784 LINC00526Q96FQ7 95 aa10.07□□□□□ -0.8
DDB1-218ENST00000540784 LINC01620Q4KN68 170 aa10.06□□□□□ -0.8
DDB1-218ENST00000540784 C9orf163Q8N9P6 203 aa10.06□□□□□ -0.8
DDB1-218ENST00000540784 DYNC1H1Q14204 4646 aaKnown RBP10.05□□□□□ -0.8
DDB1-218ENST00000540784 IGLV4-69A0A075B6H9 119 aa10.05□□□□□ -0.8
DDB1-218ENST00000540784 FABP4P15090 132 aa10.05□□□□□ -0.8
DDB1-218ENST00000540784 OR10D4PQ8NGN7 298 aa10.05□□□□□ -0.8
DDB1-218ENST00000540784 ORAOV1Q8WV07 137 aa10.05□□□□□ -0.8
DDB1-218ENST00000540784 CDKN2A-AS1Q9UH64 79 aa10.05□□□□□ -0.8
DDB1-218ENST00000540784 HSPB8Q9UJY1 196 aa10.05□□□□□ -0.8
DDB1-218ENST00000540784 TMEM238LA0A1B0GVL6 79 aa10.04□□□□□ -0.8
DDB1-218ENST00000540784 SPAG11BQ08648 103 aa10.04□□□□□ -0.8
DDB1-218ENST00000540784 LINC00469Q8N7U9 141 aa10.04□□□□□ -0.8
DDB1-218ENST00000540784 TRAV12-1A0A0B4J245 112 aa10.03□□□□□ -0.8
DDB1-218ENST00000540784 SYCNQ0VAF6 134 aa10.03□□□□□ -0.8
DDB1-218ENST00000540784 C2orf48Q96LS8 159 aa10.03□□□□□ -0.8
DDB1-218ENST00000540784 PACRGQ96M98 296 aaPredicted RBP10.03□□□□□ -0.8
DDB1-218ENST00000540784 CHTOPQ9Y3Y2 248 aaKnown RBP10.03□□□□□ -0.8
DDB1-218ENST00000540784 BIRC6Q9NR09 4857 aa10.02□□□□□ -0.81
DDB1-218ENST00000540784 IGLC3P0DOY3 106 aa10.02□□□□□ -0.81
DDB1-218ENST00000540784 COA6Q5JTJ3 125 aaKnown RBP10.02□□□□□ -0.81
DDB1-218ENST00000540784 CAMK2N2Q96S95 79 aa10.02□□□□□ -0.81
DDB1-218ENST00000540784 DNAH5Q8TE73 4624 aa10.02□□□□□ -0.81
DDB1-218ENST00000540784 IGLV5-45A0A087WSX0 123 aa10.01□□□□□ -0.81
DDB1-218ENST00000540784 F8WDY8 70 aa10.01□□□□□ -0.81
DDB1-218ENST00000540784 H3BRM9 83 aa10.01□□□□□ -0.81
DDB1-218ENST00000540784 SDIM1Q6ZPB5 146 aa10.01□□□□□ -0.81
DDB1-218ENST00000540784 CHAC1Q9BUX1 264 aa10.01□□□□□ -0.81
DDB1-218ENST00000540784 PRSS2P07478 247 aa10□□□□□ -0.81
DDB1-218ENST00000540784 C6orf226Q5I0X4 101 aa10□□□□□ -0.81
DDB1-218ENST00000540784 CARD19Q96LW7 228 aa10□□□□□ -0.81
DDB1-218ENST00000540784 H0Y8G0 127 aa9.99□□□□□ -0.81
DDB1-218ENST00000540784 CDK2AP2O75956 126 aa9.99□□□□□ -0.81
DDB1-218ENST00000540784 KIAA0087Q14695 138 aa9.99□□□□□ -0.81
DDB1-218ENST00000540784 MAP1LC3CQ9BXW4 147 aa9.99□□□□□ -0.81
DDB1-218ENST00000540784 TOMM7Q9P0U1 55 aa9.99□□□□□ -0.81
DDB1-218ENST00000540784 NDUFA1O15239 70 aa9.98□□□□□ -0.81
DDB1-218ENST00000540784 Q6ZRU5 148 aa9.98□□□□□ -0.81
DDB1-218ENST00000540784 MRPL35Q9NZE8 188 aaKnown RBP9.98□□□□□ -0.81
DDB1-218ENST00000540784 FAM30AQ9NZY2 134 aa9.98□□□□□ -0.81
DDB1-218ENST00000540784 LRP1BQ9NZR2 4599 aa9.98□□□□□ -0.81
DDB1-218ENST00000540784 C11orf86A6NJI1 115 aa9.97□□□□□ -0.81
DDB1-218ENST00000540784 SMIM1B2RUZ4 78 aa9.97□□□□□ -0.81
DDB1-218ENST00000540784 F8VRH5 84 aa9.97□□□□□ -0.81
DDB1-218ENST00000540784 SPINK8P0C7L1 97 aa9.97□□□□□ -0.81
DDB1-218ENST00000540784 ZNF22P17026 224 aaPredicted RBP9.97□□□□□ -0.81
DDB1-218ENST00000540784 TMEM170BQ5T4T1 132 aa9.97□□□□□ -0.81
DDB1-218ENST00000540784 UNQ6190/PRO20217Q6UXQ8 127 aa9.97□□□□□ -0.81
DDB1-218ENST00000540784 CKS1BP61024 79 aa9.96□□□□□ -0.82
DDB1-218ENST00000540784 RNF151Q2KHN1 245 aa9.96□□□□□ -0.82
DDB1-218ENST00000540784 Q8IZM0 81 aa9.96□□□□□ -0.82
DDB1-218ENST00000540784 DPH3Q96FX2 82 aa9.96□□□□□ -0.82
DDB1-218ENST00000540784 PKIGQ9Y2B9 76 aa9.96□□□□□ -0.82
DDB1-218ENST00000540784 XGP55808 180 aa9.95□□□□□ -0.82
DDB1-218ENST00000540784 ODF1Q14990 250 aa9.95□□□□□ -0.82
DDB1-218ENST00000540784 Q6ZSA8 131 aa9.95□□□□□ -0.82
DDB1-218ENST00000540784 C10orf25Q5T742 122 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms