RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 UBE2D1P51668 147 aa8.43□□□□□ -1.06
LMO3-223ENST00000540590 ENHOQ6UWT2 76 aa8.43□□□□□ -1.06
LMO3-223ENST00000540590 IGLV4-69A0A075B6H9 119 aa8.42□□□□□ -1.06
LMO3-223ENST00000540590 KRTAP4-8A0A0G2JLE6 195 aa8.42□□□□□ -1.06
LMO3-223ENST00000540590 A0A0J9YXV3 536 aa8.42□□□□□ -1.06
LMO3-223ENST00000540590 LINC00959A0A1B0GUT2 108 aa8.42□□□□□ -1.06
LMO3-223ENST00000540590 HERVK_113P63121 156 aa8.42□□□□□ -1.06
LMO3-223ENST00000540590 JOSD1Q15040 202 aaPredicted RBP8.42□□□□□ -1.06
LMO3-223ENST00000540590 SS18Q15532 418 aa8.42□□□□□ -1.06
LMO3-223ENST00000540590 UBE2WQ96B02 151 aa8.42□□□□□ -1.06
LMO3-223ENST00000540590 TINCRA0A1B0GVN0 87 aa8.41□□□□□ -1.06
LMO3-223ENST00000540590 SCGB1D1O95968 90 aa8.41□□□□□ -1.06
LMO3-223ENST00000540590 NFE4Q86UQ8 179 aa8.41□□□□□ -1.06
LMO3-223ENST00000540590 LINC00476Q8WZB0 136 aa8.41□□□□□ -1.06
LMO3-223ENST00000540590 KRTAP1-5Q9BYS1 174 aa8.41□□□□□ -1.06
LMO3-223ENST00000540590 C11orf86A6NJI1 115 aa8.4□□□□□ -1.06
LMO3-223ENST00000540590 DPM2O94777 84 aa8.4□□□□□ -1.06
LMO3-223ENST00000540590 IGLC3P0DOY3 106 aa8.4□□□□□ -1.06
LMO3-223ENST00000540590 PYY3Q5JQD4 70 aa8.4□□□□□ -1.06
LMO3-223ENST00000540590 LINC00242Q5T6M2 205 aa8.4□□□□□ -1.06
LMO3-223ENST00000540590 LINC01561Q8N1V8 128 aa8.4□□□□□ -1.06
LMO3-223ENST00000540590 CHAC1Q9BUX1 264 aa8.4□□□□□ -1.06
LMO3-223ENST00000540590 IGLV10-54A0A075B6I4 117 aa8.39□□□□□ -1.07
LMO3-223ENST00000540590 IGLV5-45A0A087WSX0 123 aa8.39□□□□□ -1.07
LMO3-223ENST00000540590 NBDYA0A0U1RRE5 68 aa8.39□□□□□ -1.07
LMO3-223ENST00000540590 LY6G6CO95867 125 aa8.39□□□□□ -1.07
LMO3-223ENST00000540590 COX6A2Q02221 97 aa8.39□□□□□ -1.07
LMO3-223ENST00000540590 LYSTQ99698 3801 aa8.39□□□□□ -1.07
LMO3-223ENST00000540590 TM2D2Q9BX73 214 aa8.39□□□□□ -1.07
LMO3-223ENST00000540590 GEMIN7Q9H840 131 aaKnown RBP8.39□□□□□ -1.07
LMO3-223ENST00000540590 VPS13DQ5THJ4 4388 aa8.39□□□□□ -1.07
LMO3-223ENST00000540590 H3BRM9 83 aa8.38□□□□□ -1.07
LMO3-223ENST00000540590 IGKCP01834 107 aa8.38□□□□□ -1.07
LMO3-223ENST00000540590 CD164L2Q6UWJ8 174 aa8.38□□□□□ -1.07
LMO3-223ENST00000540590 ATOH7Q8N100 152 aa8.38□□□□□ -1.07
LMO3-223ENST00000540590 CHCHD10Q8WYQ3 142 aaPredicted RBP8.38□□□□□ -1.07
LMO3-223ENST00000540590 C1orf43Q9BWL3 253 aa8.38□□□□□ -1.07
LMO3-223ENST00000540590 Q9HAA7 133 aa8.38□□□□□ -1.07
LMO3-223ENST00000540590 ALMS1Q8TCU4 4167 aa8.37□□□□□ -1.07
LMO3-223ENST00000540590 ZNF22P17026 224 aaPredicted RBP8.37□□□□□ -1.07
LMO3-223ENST00000540590 XCL1P47992 114 aa8.37□□□□□ -1.07
LMO3-223ENST00000540590 CDPF1Q6NVV7 123 aa8.36□□□□□ -1.07
LMO3-223ENST00000540590 KRTAP26-1Q6PEX3 210 aa8.36□□□□□ -1.07
LMO3-223ENST00000540590 LINC00469Q8N7U9 141 aa8.36□□□□□ -1.07
LMO3-223ENST00000540590 CDKN2A-AS1Q9UH64 79 aa8.36□□□□□ -1.07
LMO3-223ENST00000540590 IGKV2D-24A0A075B6R9 120 aa8.35□□□□□ -1.07
LMO3-223ENST00000540590 IGHV3OR16-9A0A0B4J2B5 98 aa8.35□□□□□ -1.07
LMO3-223ENST00000540590 GAGE12HA6NDE8 117 aa8.35□□□□□ -1.07
LMO3-223ENST00000540590 SMIM6P0DI80 62 aa8.35□□□□□ -1.07
LMO3-223ENST00000540590 TMEM170BQ5T4T1 132 aa8.35□□□□□ -1.07
LMO3-223ENST00000540590 DNAH6Q9C0G6 4158 aa8.35□□□□□ -1.07
LMO3-223ENST00000540590 A0A087WZ39 114 aa8.34□□□□□ -1.07
LMO3-223ENST00000540590 M0R2N4 97 aa8.34□□□□□ -1.07
LMO3-223ENST00000540590 APOMO95445 188 aa8.34□□□□□ -1.07
LMO3-223ENST00000540590 HERVK_113P61574 105 aa8.34□□□□□ -1.07
LMO3-223ENST00000540590 FOXI1Q12951 378 aa8.34□□□□□ -1.07
LMO3-223ENST00000540590 Q6ZR54 194 aa8.34□□□□□ -1.07
LMO3-223ENST00000540590 DNAH1Q9P2D7 4330 aa8.34□□□□□ -1.07
LMO3-223ENST00000540590 hDV102S1A0JD36 115 aa8.33□□□□□ -1.08
LMO3-223ENST00000540590 HSBP1L1C9JCN9 74 aa8.33□□□□□ -1.08
LMO3-223ENST00000540590 COX7A2LO14548 114 aa8.33□□□□□ -1.08
LMO3-223ENST00000540590 MAJINQ3KP22 176 aa8.33□□□□□ -1.08
LMO3-223ENST00000540590 SFTA2Q6UW10 78 aa8.33□□□□□ -1.08
LMO3-223ENST00000540590 C5orf38Q86SI9 138 aa8.33□□□□□ -1.08
LMO3-223ENST00000540590 TMEM223A0PJW6 202 aa8.32□□□□□ -1.08
LMO3-223ENST00000540590 SPINK8P0C7L1 97 aa8.32□□□□□ -1.08
LMO3-223ENST00000540590 CFAP161Q6P656 301 aa8.32□□□□□ -1.08
LMO3-223ENST00000540590 STPG4Q8N801 248 aa8.32□□□□□ -1.08
LMO3-223ENST00000540590 LCE6AA0A183 80 aa8.31□□□□□ -1.08
LMO3-223ENST00000540590 F8WDY8 70 aa8.31□□□□□ -1.08
LMO3-223ENST00000540590 IGHV3-64A0A075B6Q5 118 aa8.3□□□□□ -1.08
LMO3-223ENST00000540590 SMIM1B2RUZ4 78 aa8.3□□□□□ -1.08
LMO3-223ENST00000540590 MALP21145 153 aa8.3□□□□□ -1.08
LMO3-223ENST00000540590 ANKRD39Q53RE8 183 aa8.3□□□□□ -1.08
LMO3-223ENST00000540590 C6orf223Q8N319 242 aa8.3□□□□□ -1.08
LMO3-223ENST00000540590 VAMP8Q9BV40 100 aa8.3□□□□□ -1.08
LMO3-223ENST00000540590 IGHV1-58A0A0C4DH39 117 aa8.29□□□□□ -1.08
LMO3-223ENST00000540590 IGLV5-39A0A0G2JS06 123 aa8.29□□□□□ -1.08
LMO3-223ENST00000540590 E9PLD3 99 aa8.29□□□□□ -1.08
LMO3-223ENST00000540590 S100A12P80511 92 aa8.29□□□□□ -1.08
LMO3-223ENST00000540590 C14orf177Q52M58 125 aa8.29□□□□□ -1.08
LMO3-223ENST00000540590 MAPKAPK5-AS1Q8N8E1 139 aa8.29□□□□□ -1.08
LMO3-223ENST00000540590 PLEKHB2Q96CS7 222 aa8.29□□□□□ -1.08
LMO3-223ENST00000540590 IGKV2D-26A0A0A0MRZ7 120 aa8.28□□□□□ -1.08
LMO3-223ENST00000540590 CXCL5P42830 114 aa8.28□□□□□ -1.08
LMO3-223ENST00000540590 Q6ZRN7 208 aaPredicted RBP8.28□□□□□ -1.08
LMO3-223ENST00000540590 PAM16Q9Y3D7 125 aa8.28□□□□□ -1.08
LMO3-223ENST00000540590 LEPROTO15243 131 aa8.27□□□□□ -1.09
LMO3-223ENST00000540590 PSCAO43653 123 aa8.27□□□□□ -1.09
LMO3-223ENST00000540590 NMUP48645 174 aa8.27□□□□□ -1.09
LMO3-223ENST00000540590 SPATA45Q537H7 98 aa8.27□□□□□ -1.09
LMO3-223ENST00000540590 C1orf134Q5TEV5 83 aa8.27□□□□□ -1.09
LMO3-223ENST00000540590 Q8IZM0 81 aa8.27□□□□□ -1.09
LMO3-223ENST00000540590 C12orf57Q99622 126 aa8.27□□□□□ -1.09
LMO3-223ENST00000540590 KMT2AQ03164 3969 aa8.26□□□□□ -1.09
LMO3-223ENST00000540590 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
LMO3-223ENST00000540590 LINC00518Q8N0U6 118 aa8.26□□□□□ -1.09
LMO3-223ENST00000540590 C15orf56Q8N910 161 aa8.26□□□□□ -1.09
LMO3-223ENST00000540590 ORAOV1Q8WV07 137 aa8.26□□□□□ -1.09
LMO3-223ENST00000540590 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms