RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 C12orf57Q99622 126 aa7.3□□□□□ -1.24
YBX3-207ENST00000539204 IGLV1-50A0A075B6I6 118 aa7.29□□□□□ -1.24
YBX3-207ENST00000539204 NUPR1O60356 82 aa7.29□□□□□ -1.24
YBX3-207ENST00000539204 SERF1AO75920 110 aa7.29□□□□□ -1.24
YBX3-207ENST00000539204 C1orf137Q5JT78 98 aa7.29□□□□□ -1.24
YBX3-207ENST00000539204 FAM104BQ5XKR9 115 aa7.29□□□□□ -1.24
YBX3-207ENST00000539204 DIRC1Q969H9 104 aa7.29□□□□□ -1.24
YBX3-207ENST00000539204 TMEM191AQ9H0A3 160 aa7.29□□□□□ -1.24
YBX3-207ENST00000539204 GVQW2A0A096LPI5 108 aaPredicted RBP7.28□□□□□ -1.24
YBX3-207ENST00000539204 NTF3P20783 257 aa7.28□□□□□ -1.24
YBX3-207ENST00000539204 PDZD11Q5EBL8 140 aa7.28□□□□□ -1.24
YBX3-207ENST00000539204 JOSD1Q15040 202 aaPredicted RBP7.27□□□□□ -1.25
YBX3-207ENST00000539204 PYY3Q5JQD4 70 aa7.27□□□□□ -1.25
YBX3-207ENST00000539204 TMEM243Q9BU79 118 aa7.27□□□□□ -1.25
YBX3-207ENST00000539204 IGKV3OR2-268A0A0C4DH90 116 aa7.26□□□□□ -1.25
YBX3-207ENST00000539204 UBE2L6O14933 153 aa7.26□□□□□ -1.25
YBX3-207ENST00000539204 PPBPP02775 128 aa7.26□□□□□ -1.25
YBX3-207ENST00000539204 TWIST1Q15672 202 aa7.26□□□□□ -1.25
YBX3-207ENST00000539204 CHCHD1Q96BP2 118 aaKnown RBP7.26□□□□□ -1.25
YBX3-207ENST00000539204 TPPP3Q9BW30 176 aa7.26□□□□□ -1.25
YBX3-207ENST00000539204 MUC17Q685J3 4493 aa7.25□□□□□ -1.25
YBX3-207ENST00000539204 SMIM17P0DL12 118 aa7.25□□□□□ -1.25
YBX3-207ENST00000539204 PMCHP20382 165 aa7.25□□□□□ -1.25
YBX3-207ENST00000539204 CARD19Q96LW7 228 aa7.25□□□□□ -1.25
YBX3-207ENST00000539204 LAMTOR2Q9Y2Q5 125 aa7.25□□□□□ -1.25
YBX3-207ENST00000539204 A0A1W2PNN7 141 aa7.24□□□□□ -1.25
YBX3-207ENST00000539204 IGLV7-43P04211 117 aa7.24□□□□□ -1.25
YBX3-207ENST00000539204 LINC00614P0C842 121 aa7.24□□□□□ -1.25
YBX3-207ENST00000539204 RAB4AP20338 218 aa7.24□□□□□ -1.25
YBX3-207ENST00000539204 UBE2D1P51668 147 aa7.24□□□□□ -1.25
YBX3-207ENST00000539204 PTTG1IPP53801 180 aa7.24□□□□□ -1.25
YBX3-207ENST00000539204 GAGE2BQ13066 116 aa7.24□□□□□ -1.25
YBX3-207ENST00000539204 MRPL51Q4U2R6 128 aaKnown RBP7.24□□□□□ -1.25
YBX3-207ENST00000539204 SMIM15Q7Z3B0 74 aa7.24□□□□□ -1.25
YBX3-207ENST00000539204 ORMDL3Q8N138 153 aa7.24□□□□□ -1.25
YBX3-207ENST00000539204 OR10AG1Q8NH19 301 aa7.24□□□□□ -1.25
YBX3-207ENST00000539204 CHCHD10Q8WYQ3 142 aaPredicted RBP7.24□□□□□ -1.25
YBX3-207ENST00000539204 NIT2Q9NQR4 276 aa7.24□□□□□ -1.25
YBX3-207ENST00000539204 H0Y9J4 135 aa7.23□□□□□ -1.25
YBX3-207ENST00000539204 RPL13AP40429 203 aaKnown RBP7.23□□□□□ -1.25
YBX3-207ENST00000539204 AMTP48728 403 aa7.23□□□□□ -1.25
YBX3-207ENST00000539204 SPANXN1Q5VSR9 72 aa7.23□□□□□ -1.25
YBX3-207ENST00000539204 AMN1Q8IY45 258 aa7.23□□□□□ -1.25
YBX3-207ENST00000539204 URB1-AS1Q96HZ7 61 aa7.23□□□□□ -1.25
YBX3-207ENST00000539204 PRELID3AQ96N28 172 aa7.23□□□□□ -1.25
YBX3-207ENST00000539204 PRSS47A8MTI9 375 aa7.22□□□□□ -1.25
YBX3-207ENST00000539204 HSBP1O75506 76 aa7.22□□□□□ -1.25
YBX3-207ENST00000539204 SSTP61278 116 aa7.22□□□□□ -1.25
YBX3-207ENST00000539204 S100A12P80511 92 aa7.22□□□□□ -1.25
YBX3-207ENST00000539204 LINC00526Q96FQ7 95 aa7.22□□□□□ -1.25
YBX3-207ENST00000539204 MUC21A0A140T8X8 626 aa7.21□□□□□ -1.26
YBX3-207ENST00000539204 LINC01546A6NGU7 62 aa7.21□□□□□ -1.26
YBX3-207ENST00000539204 D6R8Y8 96 aa7.21□□□□□ -1.26
YBX3-207ENST00000539204 M0QY20 66 aa7.21□□□□□ -1.26
YBX3-207ENST00000539204 TSPAN13O95857 204 aa7.21□□□□□ -1.26
YBX3-207ENST00000539204 CKS2P33552 79 aa7.21□□□□□ -1.26
YBX3-207ENST00000539204 SYCNQ0VAF6 134 aa7.21□□□□□ -1.26
YBX3-207ENST00000539204 IGHV1-58A0A0C4DH39 117 aa7.2□□□□□ -1.26
YBX3-207ENST00000539204 LOC107984640A0A0U1RRK4 108 aa7.2□□□□□ -1.26
YBX3-207ENST00000539204 ZNF561-AS1K7EIQ3 104 aa7.2□□□□□ -1.26
YBX3-207ENST00000539204 FOXI1Q12951 378 aa7.2□□□□□ -1.26
YBX3-207ENST00000539204 C9orf116Q5BN46 136 aaPredicted RBP7.2□□□□□ -1.26
YBX3-207ENST00000539204 RNASEKQ6P5S7 137 aaKnown RBP7.2□□□□□ -1.26
YBX3-207ENST00000539204 PHF5AQ7RTV0 110 aaKnown RBP7.2□□□□□ -1.26
YBX3-207ENST00000539204 MRAP2Q96G30 205 aa7.2□□□□□ -1.26
YBX3-207ENST00000539204 A0A087WZ39 114 aa7.19□□□□□ -1.26
YBX3-207ENST00000539204 KRTAP1-4P0C5Y4 121 aa7.19□□□□□ -1.26
YBX3-207ENST00000539204 FAM19A2Q8N3H0 131 aa7.19□□□□□ -1.26
YBX3-207ENST00000539204 TNFRSF6BO95407 300 aa7.18□□□□□ -1.26
YBX3-207ENST00000539204 NPYP01303 97 aa7.18□□□□□ -1.26
YBX3-207ENST00000539204 FGF6P10767 208 aa7.18□□□□□ -1.26
YBX3-207ENST00000539204 FA2HQ7L5A8 372 aa7.18□□□□□ -1.26
YBX3-207ENST00000539204 MAP1LC3AQ9H492 121 aa7.18□□□□□ -1.26
YBX3-207ENST00000539204 NXT2Q9NPJ8 142 aaKnown RBP7.18□□□□□ -1.26
YBX3-207ENST00000539204 SCGB1D1O95968 90 aa7.17□□□□□ -1.26
YBX3-207ENST00000539204 PPP1R17O96001 155 aa7.17□□□□□ -1.26
YBX3-207ENST00000539204 MGPP08493 103 aa7.17□□□□□ -1.26
YBX3-207ENST00000539204 C3orf79P0CE67 100 aa7.17□□□□□ -1.26
YBX3-207ENST00000539204 IFI27P40305 119 aaPredicted RBP7.17□□□□□ -1.26
YBX3-207ENST00000539204 XCL1P47992 114 aa7.17□□□□□ -1.26
YBX3-207ENST00000539204 COTL1Q14019 142 aa7.17□□□□□ -1.26
YBX3-207ENST00000539204 AMMECR1LQ6DCA0 310 aa7.17□□□□□ -1.26
YBX3-207ENST00000539204 NRACQ8N912 160 aa7.17□□□□□ -1.26
YBX3-207ENST00000539204 AP1S3Q96PC3 154 aa7.17□□□□□ -1.26
YBX3-207ENST00000539204 SUMO4Q6EEV6 95 aa7.16□□□□□ -1.26
YBX3-207ENST00000539204 TEX43Q6ZNM6 134 aa7.16□□□□□ -1.26
YBX3-207ENST00000539204 Q8N8P6 123 aa7.16□□□□□ -1.26
YBX3-207ENST00000539204 C20orf78Q9BR46 151 aa7.16□□□□□ -1.26
YBX3-207ENST00000539204 CDIP1Q9H305 208 aa7.16□□□□□ -1.26
YBX3-207ENST00000539204 SMKR1H3BMG3 65 aa7.15□□□□□ -1.26
YBX3-207ENST00000539204 K7EMI3 77 aa7.15□□□□□ -1.26
YBX3-207ENST00000539204 LEPROTL1O95214 131 aa7.15□□□□□ -1.26
YBX3-207ENST00000539204 LINC01547P58512 204 aaPredicted RBP7.15□□□□□ -1.26
YBX3-207ENST00000539204 KRTDAPP60985 99 aa7.15□□□□□ -1.26
YBX3-207ENST00000539204 RPL32P62910 135 aaKnown RBP7.15□□□□□ -1.26
YBX3-207ENST00000539204 HSPB8Q9UJY1 196 aa7.15□□□□□ -1.26
YBX3-207ENST00000539204 A0A096LNJ9 63 aa7.14□□□□□ -1.27
YBX3-207ENST00000539204 NCR2O95944 276 aa7.14□□□□□ -1.27
YBX3-207ENST00000539204 PMCHL1Q16048 86 aa7.14□□□□□ -1.27
YBX3-207ENST00000539204 IGLV4-69A0A075B6H9 119 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms