RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 SRIP30626 198 aa3.32□□□□□ -1.88
SSPN-206ENST00000539019 ZNF56Q15929 161 aa3.32□□□□□ -1.88
SSPN-206ENST00000539019 DAZ4Q86SG3 579 aaKnown RBP3.32□□□□□ -1.88
SSPN-206ENST00000539019 MRAP2Q96G30 205 aa3.32□□□□□ -1.88
SSPN-206ENST00000539019 GNB1LQ9BYB4 327 aa3.32□□□□□ -1.88
SSPN-206ENST00000539019 DAZ3Q9NR90 486 aaKnown RBP3.32□□□□□ -1.88
SSPN-206ENST00000539019 PKHD1L1Q86WI1 4243 aa3.31□□□□□ -1.88
SSPN-206ENST00000539019 C5orf52A6NGY3 159 aa3.31□□□□□ -1.88
SSPN-206ENST00000539019 IBA57-AS1B1ANH7 110 aa3.31□□□□□ -1.88
SSPN-206ENST00000539019 D6R8Y8 96 aa3.31□□□□□ -1.88
SSPN-206ENST00000539019 S100A8P05109 93 aa3.31□□□□□ -1.88
SSPN-206ENST00000539019 S100PP25815 95 aa3.31□□□□□ -1.88
SSPN-206ENST00000539019 CCL18P55774 89 aa3.31□□□□□ -1.88
SSPN-206ENST00000539019 ENHOQ6UWT2 76 aa3.31□□□□□ -1.88
SSPN-206ENST00000539019 ABCA13Q86UQ4 5058 aa3.31□□□□□ -1.88
SSPN-206ENST00000539019 C20orf203Q8NBC4 194 aa3.31□□□□□ -1.88
SSPN-206ENST00000539019 DEFB104AQ8WTQ1 72 aa3.31□□□□□ -1.88
SSPN-206ENST00000539019 C20orf78Q9BR46 151 aa3.31□□□□□ -1.88
SSPN-206ENST00000539019 ALKBH7Q9BT30 221 aaPredicted RBP3.31□□□□□ -1.88
SSPN-206ENST00000539019 URGCP-MRPS24S4R325 110 aa3.31□□□□□ -1.88
SSPN-206ENST00000539019 IGLV4-60A0A075B6I1 120 aa3.3□□□□□ -1.88
SSPN-206ENST00000539019 A0A087WZ39 114 aa3.3□□□□□ -1.88
SSPN-206ENST00000539019 A0A096LNJ9 63 aa3.3□□□□□ -1.88
SSPN-206ENST00000539019 LRCOL1A6NCL2 159 aa3.3□□□□□ -1.88
SSPN-206ENST00000539019 SIVA1O15304 175 aa3.3□□□□□ -1.88
SSPN-206ENST00000539019 MGPP08493 103 aa3.3□□□□□ -1.88
SSPN-206ENST00000539019 WFDC2Q14508 124 aa3.3□□□□□ -1.88
SSPN-206ENST00000539019 MPV17L2Q567V2 206 aa3.3□□□□□ -1.88
SSPN-206ENST00000539019 KCNIP4Q6PIL6 250 aa3.3□□□□□ -1.88
SSPN-206ENST00000539019 LINC00518Q8N0U6 118 aa3.3□□□□□ -1.88
SSPN-206ENST00000539019 PCLOQ9Y6V0 5065 aa3.3□□□□□ -1.88
SSPN-206ENST00000539019 H7C1H1 209 aa3.29□□□□□ -1.88
SSPN-206ENST00000539019 K7EP13 123 aa3.29□□□□□ -1.88
SSPN-206ENST00000539019 M0R2N4 97 aa3.29□□□□□ -1.88
SSPN-206ENST00000539019 PPBPP02775 128 aa3.29□□□□□ -1.88
SSPN-206ENST00000539019 SMIM17P0DL12 118 aa3.29□□□□□ -1.88
SSPN-206ENST00000539019 AKR1D1P51857 326 aa3.29□□□□□ -1.88
SSPN-206ENST00000539019 RBX1P62877 108 aa3.29□□□□□ -1.88
SSPN-206ENST00000539019 MRPL52Q86TS9 123 aaKnown RBP3.29□□□□□ -1.88
SSPN-206ENST00000539019 Q8N976 141 aa3.29□□□□□ -1.88
SSPN-206ENST00000539019 SMIM2Q9BVW6 85 aa3.29□□□□□ -1.88
SSPN-206ENST00000539019 PRO0461Q9UI25 63 aa3.29□□□□□ -1.88
SSPN-206ENST00000539019 IGIPA6NJ69 53 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 I3L3M4 83 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 HLA-DQA1P01909 254 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 SMIM6P0DI80 62 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 CKS2P33552 79 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 S100A12P80511 92 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 FABP9Q0Z7S8 132 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 LAGE3Q14657 143 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 OR10J3Q5JRS4 329 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 ORMDL3Q8N138 153 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 PRELID3AQ96N28 172 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 OCR1Q9BZK8 76 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 ST20Q9HBF5 79 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 LAMTOR2Q9Y2Q5 125 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 UBE2D4Q9Y2X8 147 aa3.28□□□□□ -1.88
SSPN-206ENST00000539019 CSDC2Q9Y534 153 aaKnown RBP3.28□□□□□ -1.88
SSPN-206ENST00000539019 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.27□□□□□ -1.89
SSPN-206ENST00000539019 IGHV1-24A0A0C4DH33 117 aa3.27□□□□□ -1.89
SSPN-206ENST00000539019 IGKV2-29A2NJV5 120 aaPredicted RBP3.27□□□□□ -1.89
SSPN-206ENST00000539019 TRGC2P03986 189 aa3.27□□□□□ -1.89
SSPN-206ENST00000539019 S100A2P29034 98 aa3.27□□□□□ -1.89
SSPN-206ENST00000539019 IFI27P40305 119 aaPredicted RBP3.27□□□□□ -1.89
SSPN-206ENST00000539019 LINC00173Q6ZV60 143 aa3.27□□□□□ -1.89
SSPN-206ENST00000539019 C6orf223Q8N319 242 aa3.27□□□□□ -1.89
SSPN-206ENST00000539019 Q8N8P6 123 aa3.27□□□□□ -1.89
SSPN-206ENST00000539019 C18orf32Q8TCD1 76 aa3.27□□□□□ -1.89
SSPN-206ENST00000539019 BORCS7Q96B45 105 aa3.27□□□□□ -1.89
SSPN-206ENST00000539019 C12orf57Q99622 126 aa3.27□□□□□ -1.89
SSPN-206ENST00000539019 TIMM21Q9BVV7 248 aa3.27□□□□□ -1.89
SSPN-206ENST00000539019 CDC42SE2Q9NRR3 84 aa3.27□□□□□ -1.89
SSPN-206ENST00000539019 MYCBP2O75592 4640 aa3.27□□□□□ -1.89
SSPN-206ENST00000539019 FAT3Q8TDW7 4589 aa3.27□□□□□ -1.89
SSPN-206ENST00000539019 TRBV25-1A0A075B6N4 114 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 RPL37AP8A6NKH3 93 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 TCAPO15273 167 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 NUPR1O60356 82 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 PPP1R17O96001 155 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 IGHV3-30P01768 117 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 IGHV3-33P01772 117 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 APCSP02743 223 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 MT-ND6P03923 174 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 IGHV3-30-3P0DP02 117 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 IGHV3-30-5P0DP03 117 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 FGF6P10767 208 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 NDUFA6P56556 154 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 RPL39P62891 51 aaKnown RBP3.26□□□□□ -1.89
SSPN-206ENST00000539019 COTL1Q14019 142 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 COX19Q49B96 90 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 TMEM97Q5BJF2 176 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 SMIM15Q7Z3B0 74 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 TMEM243Q9BU79 118 aa3.26□□□□□ -1.89
SSPN-206ENST00000539019 A0A087WTM6 91 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 TRAV8-6A0A0B4J262 113 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 HIST1H2BKO60814 126 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 HIST1H2BJP06899 126 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 HIST1H2BOP23527 126 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 HIST1H2BBP33778 126 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 HIST1H2BDP58876 126 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms