RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 HIST1H2BLQ99880 126 aa5.72□□□□□ -1.49
LPCAT3-208ENST00000538987 CHAC1Q9BUX1 264 aa5.72□□□□□ -1.49
LPCAT3-208ENST00000538987 MRPL35Q9NZE8 188 aaKnown RBP5.72□□□□□ -1.49
LPCAT3-208ENST00000538987 VPS13DQ5THJ4 4388 aa5.72□□□□□ -1.49
LPCAT3-208ENST00000538987 C20orf202A1L168 122 aa5.71□□□□□ -1.5
LPCAT3-208ENST00000538987 F8VRH5 84 aa5.71□□□□□ -1.5
LPCAT3-208ENST00000538987 H3BRM9 83 aa5.71□□□□□ -1.5
LPCAT3-208ENST00000538987 RTL8CO15255 209 aa5.71□□□□□ -1.5
LPCAT3-208ENST00000538987 APOMO95445 188 aa5.71□□□□□ -1.5
LPCAT3-208ENST00000538987 C3orf79P0CE67 100 aa5.71□□□□□ -1.5
LPCAT3-208ENST00000538987 TMEM170BQ5T4T1 132 aa5.71□□□□□ -1.5
LPCAT3-208ENST00000538987 KRTAP26-1Q6PEX3 210 aa5.71□□□□□ -1.5
LPCAT3-208ENST00000538987 PET117Q6UWS5 81 aa5.71□□□□□ -1.5
LPCAT3-208ENST00000538987 Q6ZRN7 208 aaPredicted RBP5.71□□□□□ -1.5
LPCAT3-208ENST00000538987 MAPKAPK5-AS1Q8N8E1 139 aa5.71□□□□□ -1.5
LPCAT3-208ENST00000538987 PMCHL2Q9BQD1 86 aa5.71□□□□□ -1.5
LPCAT3-208ENST00000538987 DNAH1Q9P2D7 4330 aa5.71□□□□□ -1.5
LPCAT3-208ENST00000538987 ALMS1Q8TCU4 4167 aa5.7□□□□□ -1.5
LPCAT3-208ENST00000538987 IGHV3OR16-9A0A0B4J2B5 98 aa5.7□□□□□ -1.5
LPCAT3-208ENST00000538987 USP17L23D6RBM5 183 aa5.7□□□□□ -1.5
LPCAT3-208ENST00000538987 DPM2O94777 84 aa5.7□□□□□ -1.5
LPCAT3-208ENST00000538987 IGLC3P0DOY3 106 aa5.7□□□□□ -1.5
LPCAT3-208ENST00000538987 TNP2Q05952 138 aa5.7□□□□□ -1.5
LPCAT3-208ENST00000538987 ODF1Q14990 250 aa5.7□□□□□ -1.5
LPCAT3-208ENST00000538987 LINC00336Q6ZUF6 198 aa5.7□□□□□ -1.5
LPCAT3-208ENST00000538987 FAM19A3Q7Z5A8 133 aa5.7□□□□□ -1.5
LPCAT3-208ENST00000538987 CDKN2A-AS1Q9UH64 79 aa5.7□□□□□ -1.5
LPCAT3-208ENST00000538987 LYSTQ99698 3801 aa5.7□□□□□ -1.5
LPCAT3-208ENST00000538987 IGLV4-69A0A075B6H9 119 aa5.69□□□□□ -1.5
LPCAT3-208ENST00000538987 A0A087WTM6 91 aa5.69□□□□□ -1.5
LPCAT3-208ENST00000538987 A0A087WZ39 114 aa5.69□□□□□ -1.5
LPCAT3-208ENST00000538987 IGHV1-58A0A0C4DH39 117 aa5.69□□□□□ -1.5
LPCAT3-208ENST00000538987 hDV102S1A0JD36 115 aa5.69□□□□□ -1.5
LPCAT3-208ENST00000538987 C11orf86A6NJI1 115 aa5.69□□□□□ -1.5
LPCAT3-208ENST00000538987 ZNF561-AS1K7EIQ3 104 aa5.69□□□□□ -1.5
LPCAT3-208ENST00000538987 IGKCP01834 107 aa5.69□□□□□ -1.5
LPCAT3-208ENST00000538987 PLNP26678 52 aa5.69□□□□□ -1.5
LPCAT3-208ENST00000538987 HIGD2BQ4VC39 106 aa5.69□□□□□ -1.5
LPCAT3-208ENST00000538987 C14orf177Q52M58 125 aa5.69□□□□□ -1.5
LPCAT3-208ENST00000538987 SPATA12Q7Z6I5 190 aa5.69□□□□□ -1.5
LPCAT3-208ENST00000538987 OR10D4PQ8NGN7 298 aa5.69□□□□□ -1.5
LPCAT3-208ENST00000538987 TOMM7Q9P0U1 55 aa5.69□□□□□ -1.5
LPCAT3-208ENST00000538987 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.68□□□□□ -1.5
LPCAT3-208ENST00000538987 SCGB1D1O95968 90 aa5.68□□□□□ -1.5
LPCAT3-208ENST00000538987 PRSS2P07478 247 aa5.68□□□□□ -1.5
LPCAT3-208ENST00000538987 SPINK8P0C7L1 97 aa5.68□□□□□ -1.5
LPCAT3-208ENST00000538987 ZNF22P17026 224 aaPredicted RBP5.68□□□□□ -1.5
LPCAT3-208ENST00000538987 ORAOV1Q8WV07 137 aa5.68□□□□□ -1.5
LPCAT3-208ENST00000538987 IGHV3-64A0A075B6Q5 118 aa5.67□□□□□ -1.5
LPCAT3-208ENST00000538987 LRCOL1A6NCL2 159 aa5.67□□□□□ -1.5
LPCAT3-208ENST00000538987 WFDC2Q14508 124 aa5.67□□□□□ -1.5
LPCAT3-208ENST00000538987 C6orf226Q5I0X4 101 aa5.67□□□□□ -1.5
LPCAT3-208ENST00000538987 LINC01545Q5VT33 79 aa5.67□□□□□ -1.5
LPCAT3-208ENST00000538987 LINC01561Q8N1V8 128 aa5.67□□□□□ -1.5
LPCAT3-208ENST00000538987 Q8N814 137 aa5.67□□□□□ -1.5
LPCAT3-208ENST00000538987 IGLV5-45A0A087WSX0 123 aa5.66□□□□□ -1.5
LPCAT3-208ENST00000538987 AKR1D1P51857 326 aa5.66□□□□□ -1.5
LPCAT3-208ENST00000538987 CKS1BP61024 79 aa5.66□□□□□ -1.5
LPCAT3-208ENST00000538987 HERVK_113P61574 105 aa5.66□□□□□ -1.5
LPCAT3-208ENST00000538987 SPAG11BQ08648 103 aa5.66□□□□□ -1.5
LPCAT3-208ENST00000538987 C15orf56Q8N910 161 aa5.66□□□□□ -1.5
LPCAT3-208ENST00000538987 LINC00526Q96FQ7 95 aa5.66□□□□□ -1.5
LPCAT3-208ENST00000538987 GVQW2A0A096LPI5 108 aaPredicted RBP5.65□□□□□ -1.5
LPCAT3-208ENST00000538987 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.65□□□□□ -1.5
LPCAT3-208ENST00000538987 TMEM223A0PJW6 202 aa5.65□□□□□ -1.5
LPCAT3-208ENST00000538987 SMIM1B2RUZ4 78 aa5.65□□□□□ -1.5
LPCAT3-208ENST00000538987 ATOH7Q8N100 152 aa5.65□□□□□ -1.5
LPCAT3-208ENST00000538987 CAMK2N2Q96S95 79 aa5.65□□□□□ -1.5
LPCAT3-208ENST00000538987 SACSQ9NZJ4 4579 aa5.64□□□□□ -1.51
LPCAT3-208ENST00000538987 IGLV5-52A0A0A0MRZ9 124 aa5.64□□□□□ -1.51
LPCAT3-208ENST00000538987 STPG4Q8N801 248 aa5.64□□□□□ -1.51
LPCAT3-208ENST00000538987 COX7B2Q8TF08 81 aa5.64□□□□□ -1.51
LPCAT3-208ENST00000538987 PGPEP1Q9NXJ5 209 aa5.64□□□□□ -1.51
LPCAT3-208ENST00000538987 HSBP1L1C9JCN9 74 aa5.63□□□□□ -1.51
LPCAT3-208ENST00000538987 NDUFA1O15239 70 aa5.63□□□□□ -1.51
LPCAT3-208ENST00000538987 FUSP35637 526 aaKnown RBP eCLIP5.63□□□□□ -1.51
LPCAT3-208ENST00000538987 SYCNQ0VAF6 134 aa5.63□□□□□ -1.51
LPCAT3-208ENST00000538987 Q8IZM0 81 aa5.63□□□□□ -1.51
LPCAT3-208ENST00000538987 NTN5Q8WTR8 489 aaPredicted RBP5.63□□□□□ -1.51
LPCAT3-208ENST00000538987 KMT2CQ8NEZ4 4911 aaKnown RBP5.62□□□□□ -1.51
LPCAT3-208ENST00000538987 LGALS3P17931 250 aaKnown RBP5.62□□□□□ -1.51
LPCAT3-208ENST00000538987 C2orf82Q6UX34 121 aa5.62□□□□□ -1.51
LPCAT3-208ENST00000538987 PLEKHB2Q96CS7 222 aa5.62□□□□□ -1.51
LPCAT3-208ENST00000538987 C2orf48Q96LS8 159 aa5.62□□□□□ -1.51
LPCAT3-208ENST00000538987 CARD19Q96LW7 228 aa5.62□□□□□ -1.51
LPCAT3-208ENST00000538987 KMT2AQ03164 3969 aa5.61□□□□□ -1.51
LPCAT3-208ENST00000538987 HYDINQ4G0P3 5121 aa5.61□□□□□ -1.51
LPCAT3-208ENST00000538987 IGLV5-39A0A0G2JS06 123 aa5.61□□□□□ -1.51
LPCAT3-208ENST00000538987 F8WDY8 70 aa5.61□□□□□ -1.51
LPCAT3-208ENST00000538987 LEPROTO15243 131 aa5.61□□□□□ -1.51
LPCAT3-208ENST00000538987 SLPIP03973 132 aa5.61□□□□□ -1.51
LPCAT3-208ENST00000538987 CXCL5P42830 114 aa5.61□□□□□ -1.51
LPCAT3-208ENST00000538987 KRTAP10-2P60368 255 aa5.61□□□□□ -1.51
LPCAT3-208ENST00000538987 KIAA0087Q14695 138 aa5.61□□□□□ -1.51
LPCAT3-208ENST00000538987 UNQ6190/PRO20217Q6UXQ8 127 aa5.61□□□□□ -1.51
LPCAT3-208ENST00000538987 Q6ZRU5 148 aa5.61□□□□□ -1.51
LPCAT3-208ENST00000538987 E9PLD3 99 aa5.6□□□□□ -1.51
LPCAT3-208ENST00000538987 J3QQQ9 107 aa5.6□□□□□ -1.51
LPCAT3-208ENST00000538987 NMUP48645 174 aa5.6□□□□□ -1.51
LPCAT3-208ENST00000538987 CNBPP62633 177 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms