RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 H3BUA1 57 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 M0R378 163 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 SOCS3O14543 225 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 TIMM17BO60830 172 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 NXPH4O95158 308 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 HBDP02042 147 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 IL5P05113 134 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 SRP19P09132 144 aaKnown RBP1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 SMIM13P0DJ93 91 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 COX7CP15954 63 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 CBLN1P23435 193 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 COX7A1P24310 79 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 FUSP35637 526 aaKnown RBP eCLIP1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF80P51504 273 aaPredicted RBP1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 LINC00313P59037 77 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 UBE2L3P68036 154 aaKnown RBP1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 WT1-ASQ06250 92 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 CIRBPQ14011 172 aaKnown RBP1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 WFDC2Q14508 124 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 KIAA0087Q14695 138 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 ELOBQ15370 118 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 S100A7L2Q5SY68 101 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 KPRPQ5T749 579 aaPredicted RBP1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 LINC01545Q5VT33 79 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 RPL7L1Q6DKI1 246 aaKnown RBP1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 REG3GQ6UW15 175 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM136Q6ZRR5 245 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 TEN1Q86WV5 123 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 AMN1Q8IY45 258 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM61Q8N0U2 210 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 TOMM5Q8N4H5 51 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 LINC00337Q8N6G1 96 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 KLHL30-AS1Q8NEE0 82 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 LSM10Q969L4 123 aaKnown RBP1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 RNF185Q96GF1 192 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 VSIG2Q96IQ7 327 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 IMMP2LQ96T52 175 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 MGST2Q99735 147 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 SHANK2-AS3Q9BTD1 123 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 SLC25A2Q9BXI2 301 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 NPCDR1Q9BY65 106 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 NDUFA4L2Q9NRX3 87 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 RABAC1Q9UI14 185 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 HILPDAQ9Y5L2 63 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 PKHD1P08F94 4074 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 TENM2Q9NT68 2774 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 IGKV1D-37A0A075B6S9 117 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 IGKV1OR2-108A0A075B7D4 117 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 TRAV9-2A0A087WT02 112 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 TRAV14DV4A0A0A6YYC5 116 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 TRAV2A0A0B4J234 112 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 TRAV1-1A0A0B4J248 108 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 TRBV27A0A0K0K1C4 114 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 hADV29S1A0JD25 119 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 SNRPGP15A8MWD9 76 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 G3V318 75 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 SYS1-DBNDD2H3BUS1 97 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 I3L2K1 104 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 K7EIM0 57 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 ATOX1O00244 68 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 ZNF253O75346 499 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 TCL1BO95988 128 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 IGKCP01834 107 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 PRM2P04554 102 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 CD7P09564 240 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 RNASE2P10153 161 aaKnown RBP1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 CD24P25063 80 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 ZNF138P52744 262 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 FXYD4P59646 89 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 YPEL3P61236 119 aaPredicted RBP1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 HERVK_113P61574 105 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 PRR3P79522 188 aaKnown RBP1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 CXCL6P80162 114 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 MRPS36P82909 103 aaKnown RBP1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 PRCDQ00LT1 54 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 EGFEM1PQ0D2K5 195 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 ZNF345Q14585 488 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 SS18Q15532 418 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 C2orf83Q53S99 150 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 C10orf55Q5SWW7 151 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 LGALS9CQ6DKI2 356 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 SCXQ7RTU7 201 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 PCP2Q8IVA1 136 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 TMEM252Q8N6L7 170 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 DAND5Q8N907 189 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 WFDC9Q8NEX5 89 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 C18orf32Q8TCD1 76 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 TMEM158Q8WZ71 300 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 TVP23CQ96ET8 276 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 SMDT1Q9H4I9 107 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 NXT2Q9NPJ8 142 aaKnown RBP1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 IL36BQ9NZH7 164 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 MRPL36Q9P0J6 103 aaKnown RBP1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 HHLA3Q9XRX5 114 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 ARL2-SNX15V9GYD0 113 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 DYNC1H1Q14204 4646 aaKnown RBP1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 DNAH8Q96JB1 4490 aa1.27□□□□□ -2.21
CBX3P4-201ENST00000538909 LRP1BQ9NZR2 4599 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 TRBV24-1A0A075B6N3 115 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 IGHV3OR16-12A0A075B7B8 117 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms