RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 LOC107984640A0A0U1RRK4 108 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 LOC389332A0A1B0GUA5 103 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 C1orf196B1AJZ1 125 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 COX7A2LO14548 114 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 TCAPO15273 167 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 PPBPP02775 128 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 PTTG1IPP53801 180 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 REG3GQ6UW15 175 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 SPINK6Q6UWN8 80 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 TMEM136Q6ZRR5 245 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 SLC7A5P1Q8MH63 180 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 SVBPQ8N300 66 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 C20orf78Q9BR46 151 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 TIMM21Q9BVV7 248 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 SMIM2Q9BVW6 85 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 UBE2D4Q9Y2X8 147 aa5.4□□□□□ -1.54
DDB1-212ENST00000538470 IGLV4-69A0A075B6H9 119 aa5.39□□□□□ -1.55
DDB1-212ENST00000538470 TRBV24-1A0A075B6N3 115 aa5.39□□□□□ -1.55
DDB1-212ENST00000538470 TRAV9-1A0A075B6T8 112 aa5.39□□□□□ -1.55
DDB1-212ENST00000538470 SNAPINO95295 136 aa5.39□□□□□ -1.55
DDB1-212ENST00000538470 APOMO95445 188 aa5.39□□□□□ -1.55
DDB1-212ENST00000538470 MALP21145 153 aa5.39□□□□□ -1.55
DDB1-212ENST00000538470 RPL32P62910 135 aaKnown RBP5.39□□□□□ -1.55
DDB1-212ENST00000538470 Q6ZRP5 223 aa5.39□□□□□ -1.55
DDB1-212ENST00000538470 LINC00526Q96FQ7 95 aa5.39□□□□□ -1.55
DDB1-212ENST00000538470 C2orf48Q96LS8 159 aa5.39□□□□□ -1.55
DDB1-212ENST00000538470 LRP2P98164 4655 aa5.39□□□□□ -1.55
DDB1-212ENST00000538470 A0A0J9YXV3 536 aa5.38□□□□□ -1.55
DDB1-212ENST00000538470 KIAA1644Q3SXP7 199 aa5.38□□□□□ -1.55
DDB1-212ENST00000538470 Q6ZUT4 128 aa5.38□□□□□ -1.55
DDB1-212ENST00000538470 CAMK2N2Q96S95 79 aa5.38□□□□□ -1.55
DDB1-212ENST00000538470 MAP1LC3AQ9H492 121 aa5.38□□□□□ -1.55
DDB1-212ENST00000538470 TGIF2-C20orf24A0A0A6YYL0 155 aa5.37□□□□□ -1.55
DDB1-212ENST00000538470 TRAV13-1A0A0B4J241 112 aa5.37□□□□□ -1.55
DDB1-212ENST00000538470 RPL39P62891 51 aaKnown RBP5.37□□□□□ -1.55
DDB1-212ENST00000538470 RNASE13Q5GAN3 156 aaKnown RBP5.37□□□□□ -1.55
DDB1-212ENST00000538470 OR10D4PQ8NGN7 298 aa5.37□□□□□ -1.55
DDB1-212ENST00000538470 F8WDY8 70 aa5.36□□□□□ -1.55
DDB1-212ENST00000538470 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.36□□□□□ -1.55
DDB1-212ENST00000538470 LCE2BO14633 110 aa5.36□□□□□ -1.55
DDB1-212ENST00000538470 RAB5AP20339 215 aa5.36□□□□□ -1.55
DDB1-212ENST00000538470 SPAG11BQ08648 103 aa5.36□□□□□ -1.55
DDB1-212ENST00000538470 GAGE2BQ13066 116 aa5.36□□□□□ -1.55
DDB1-212ENST00000538470 SRSF9Q13242 221 aaKnown RBP eCLIP5.36□□□□□ -1.55
DDB1-212ENST00000538470 RNF151Q2KHN1 245 aa5.36□□□□□ -1.55
DDB1-212ENST00000538470 GNB1LQ9BYB4 327 aa5.36□□□□□ -1.55
DDB1-212ENST00000538470 MRPL18Q9H0U6 180 aaKnown RBP5.36□□□□□ -1.55
DDB1-212ENST00000538470 SPANXA1Q9NS26 97 aa5.36□□□□□ -1.55
DDB1-212ENST00000538470 LAMTOR2Q9Y2Q5 125 aa5.36□□□□□ -1.55
DDB1-212ENST00000538470 MRPS36P82909 103 aaKnown RBP5.35□□□□□ -1.55
DDB1-212ENST00000538470 FABP9Q0Z7S8 132 aa5.35□□□□□ -1.55
DDB1-212ENST00000538470 CBLN2Q8IUK8 224 aa5.35□□□□□ -1.55
DDB1-212ENST00000538470 MRPL35Q9NZE8 188 aaKnown RBP5.35□□□□□ -1.55
DDB1-212ENST00000538470 MT-ND6P03923 174 aa5.34□□□□□ -1.55
DDB1-212ENST00000538470 IFI27P40305 119 aaPredicted RBP5.34□□□□□ -1.55
DDB1-212ENST00000538470 KRTAP10-8P60410 259 aa5.34□□□□□ -1.55
DDB1-212ENST00000538470 RPL18AQ02543 176 aaKnown RBP5.34□□□□□ -1.55
DDB1-212ENST00000538470 C9orf116Q5BN46 136 aaPredicted RBP5.34□□□□□ -1.55
DDB1-212ENST00000538470 C5orf38Q86SI9 138 aa5.34□□□□□ -1.55
DDB1-212ENST00000538470 Q8N8P6 123 aa5.34□□□□□ -1.55
DDB1-212ENST00000538470 IGHV3OR16-9A0A0B4J2B5 98 aa5.33□□□□□ -1.56
DDB1-212ENST00000538470 A0A1W2PNN7 141 aa5.33□□□□□ -1.56
DDB1-212ENST00000538470 IFITM10A6NMD0 228 aa5.33□□□□□ -1.56
DDB1-212ENST00000538470 COX19Q49B96 90 aa5.33□□□□□ -1.56
DDB1-212ENST00000538470 ORAOV1Q8WV07 137 aa5.33□□□□□ -1.56
DDB1-212ENST00000538470 OPRPNQ99935 248 aaPredicted RBP5.33□□□□□ -1.56
DDB1-212ENST00000538470 ALKBH7Q9BT30 221 aaPredicted RBP5.33□□□□□ -1.56
DDB1-212ENST00000538470 NXT2Q9NPJ8 142 aaKnown RBP5.33□□□□□ -1.56
DDB1-212ENST00000538470 TRAPPC1Q9Y5R8 145 aa5.33□□□□□ -1.56
DDB1-212ENST00000538470 PRSS47A8MTI9 375 aa5.32□□□□□ -1.56
DDB1-212ENST00000538470 NDUFA1O15239 70 aa5.32□□□□□ -1.56
DDB1-212ENST00000538470 TLX1NBP0CAT3 122 aa5.32□□□□□ -1.56
DDB1-212ENST00000538470 ORMDL2Q53FV1 153 aa5.32□□□□□ -1.56
DDB1-212ENST00000538470 SMCO4Q9NRQ5 59 aa5.32□□□□□ -1.56
DDB1-212ENST00000538470 PSORS1C2Q9UIG4 136 aa5.32□□□□□ -1.56
DDB1-212ENST00000538470 CYSLTR1Q9Y271 337 aa5.32□□□□□ -1.56
DDB1-212ENST00000538470 C2orf66Q6UXQ4 117 aa5.31□□□□□ -1.56
DDB1-212ENST00000538470 FA2HQ7L5A8 372 aa5.31□□□□□ -1.56
DDB1-212ENST00000538470 FAM104AQ969W3 186 aa5.31□□□□□ -1.56
DDB1-212ENST00000538470 YPEL4Q96NS1 127 aa5.31□□□□□ -1.56
DDB1-212ENST00000538470 PYGO1Q9Y3Y4 419 aa5.31□□□□□ -1.56
DDB1-212ENST00000538470 IGLV4-3A0A075B6K6 122 aa5.3□□□□□ -1.56
DDB1-212ENST00000538470 C1orf137Q5JT78 98 aa5.3□□□□□ -1.56
DDB1-212ENST00000538470 PHF5AQ7RTV0 110 aaKnown RBP5.3□□□□□ -1.56
DDB1-212ENST00000538470 LINC01561Q8N1V8 128 aa5.3□□□□□ -1.56
DDB1-212ENST00000538470 A0A087WZ39 114 aa5.29□□□□□ -1.56
DDB1-212ENST00000538470 TRBV30A0A0K0K1B3 111 aa5.29□□□□□ -1.56
DDB1-212ENST00000538470 K7EMI3 77 aa5.29□□□□□ -1.56
DDB1-212ENST00000538470 ZC2HC1BQ5TFG8 222 aa5.29□□□□□ -1.56
DDB1-212ENST00000538470 Q6ZN92 141 aa5.29□□□□□ -1.56
DDB1-212ENST00000538470 DIRC1Q969H9 104 aa5.29□□□□□ -1.56
DDB1-212ENST00000538470 TMEM141Q96I45 108 aa5.29□□□□□ -1.56
DDB1-212ENST00000538470 C6orf48Q9UBA6 75 aa5.29□□□□□ -1.56
DDB1-212ENST00000538470 RNF213Q63HN8 5207 aa5.28□□□□□ -1.56
DDB1-212ENST00000538470 IGLV7-43P04211 117 aa5.28□□□□□ -1.56
DDB1-212ENST00000538470 NPSP0C0P6 89 aa5.28□□□□□ -1.56
DDB1-212ENST00000538470 LINC00242Q5T6M2 205 aa5.28□□□□□ -1.56
DDB1-212ENST00000538470 TEX43Q6ZNM6 134 aa5.28□□□□□ -1.56
DDB1-212ENST00000538470 C18orf32Q8TCD1 76 aa5.28□□□□□ -1.56
DDB1-212ENST00000538470 C2orf88Q9BSF0 95 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms