RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 TRAV12-1A0A0B4J245 112 aa10.54□□□□□ -0.72
SFSWAP-206ENST00000537582 A0A0J9YXV3 536 aa10.54□□□□□ -0.72
SFSWAP-206ENST00000537582 UBE2D1P51668 147 aa10.54□□□□□ -0.72
SFSWAP-206ENST00000537582 PAPPA-AS1Q5QFB9 102 aa10.54□□□□□ -0.72
SFSWAP-206ENST00000537582 LINC00476Q8WZB0 136 aa10.54□□□□□ -0.72
SFSWAP-206ENST00000537582 PRR34Q9NV39 138 aa10.54□□□□□ -0.72
SFSWAP-206ENST00000537582 ALMS1Q8TCU4 4167 aa10.53□□□□□ -0.72
SFSWAP-206ENST00000537582 LINC00959A0A1B0GUT2 108 aa10.53□□□□□ -0.72
SFSWAP-206ENST00000537582 CHTOPQ9Y3Y2 248 aaKnown RBP10.53□□□□□ -0.72
SFSWAP-206ENST00000537582 HINT1P49773 126 aaPredicted RBP10.52□□□□□ -0.72
SFSWAP-206ENST00000537582 COX6A2Q02221 97 aa10.52□□□□□ -0.72
SFSWAP-206ENST00000537582 DLEU1O43261 78 aa10.52□□□□□ -0.73
SFSWAP-206ENST00000537582 ANKRD39Q53RE8 183 aa10.52□□□□□ -0.73
SFSWAP-206ENST00000537582 LINC00242Q5T6M2 205 aa10.52□□□□□ -0.73
SFSWAP-206ENST00000537582 Q9HAA7 133 aa10.52□□□□□ -0.73
SFSWAP-206ENST00000537582 C11orf86A6NJI1 115 aa10.51□□□□□ -0.73
SFSWAP-206ENST00000537582 M0R2N4 97 aa10.51□□□□□ -0.73
SFSWAP-206ENST00000537582 IBA57-AS1B1ANH7 110 aa10.5□□□□□ -0.73
SFSWAP-206ENST00000537582 F8VRH5 84 aa10.5□□□□□ -0.73
SFSWAP-206ENST00000537582 CCL25O15444 150 aa10.5□□□□□ -0.73
SFSWAP-206ENST00000537582 CRPP02741 224 aa10.5□□□□□ -0.73
SFSWAP-206ENST00000537582 XCL1P47992 114 aa10.5□□□□□ -0.73
SFSWAP-206ENST00000537582 C2orf91Q6ZV80 131 aa10.5□□□□□ -0.73
SFSWAP-206ENST00000537582 NBDYA0A0U1RRE5 68 aa10.49□□□□□ -0.73
SFSWAP-206ENST00000537582 BOD1L2Q8IYS8 172 aa10.49□□□□□ -0.73
SFSWAP-206ENST00000537582 CHAC1Q9BUX1 264 aa10.49□□□□□ -0.73
SFSWAP-206ENST00000537582 TP73-AS1Q9UF72 201 aa10.49□□□□□ -0.73
SFSWAP-206ENST00000537582 BVES-AS1Q5T3Y7 98 aa10.48□□□□□ -0.73
SFSWAP-206ENST00000537582 ORAOV1Q8WV07 137 aa10.48□□□□□ -0.73
SFSWAP-206ENST00000537582 CHCHD10Q8WYQ3 142 aaPredicted RBP10.48□□□□□ -0.73
SFSWAP-206ENST00000537582 SS18Q15532 418 aa10.48□□□□□ -0.73
SFSWAP-206ENST00000537582 TINCRA0A1B0GVN0 87 aa10.47□□□□□ -0.73
SFSWAP-206ENST00000537582 DPM2O94777 84 aa10.47□□□□□ -0.73
SFSWAP-206ENST00000537582 KRTAP26-1Q6PEX3 210 aa10.47□□□□□ -0.73
SFSWAP-206ENST00000537582 FAM19A3Q7Z5A8 133 aa10.47□□□□□ -0.73
SFSWAP-206ENST00000537582 NFE4Q86UQ8 179 aa10.47□□□□□ -0.73
SFSWAP-206ENST00000537582 C10orf126Q8N4M7 172 aa10.47□□□□□ -0.73
SFSWAP-206ENST00000537582 GAGE12HA6NDE8 117 aa10.46□□□□□ -0.74
SFSWAP-206ENST00000537582 IGKCP01834 107 aa10.46□□□□□ -0.74
SFSWAP-206ENST00000537582 ZNF22P17026 224 aaPredicted RBP10.46□□□□□ -0.74
SFSWAP-206ENST00000537582 KMT2AQ03164 3969 aa10.46□□□□□ -0.74
SFSWAP-206ENST00000537582 MIAQ16674 131 aa10.46□□□□□ -0.74
SFSWAP-206ENST00000537582 CDKN2A-AS1Q9UH64 79 aa10.46□□□□□ -0.74
SFSWAP-206ENST00000537582 COX11Q9Y6N1 276 aa10.46□□□□□ -0.74
SFSWAP-206ENST00000537582 IGKV2D-24A0A075B6R9 120 aa10.45□□□□□ -0.74
SFSWAP-206ENST00000537582 C5orf38Q86SI9 138 aa10.45□□□□□ -0.74
SFSWAP-206ENST00000537582 GEMIN7Q9H840 131 aaKnown RBP10.45□□□□□ -0.74
SFSWAP-206ENST00000537582 IGHV3OR16-9A0A0B4J2B5 98 aa10.44□□□□□ -0.74
SFSWAP-206ENST00000537582 FOXI1Q12951 378 aa10.44□□□□□ -0.74
SFSWAP-206ENST00000537582 TRAV8-3A0A0A6YYJ7 113 aa10.43□□□□□ -0.74
SFSWAP-206ENST00000537582 PLNP26678 52 aa10.43□□□□□ -0.74
SFSWAP-206ENST00000537582 TTC32Q5I0X7 151 aa10.43□□□□□ -0.74
SFSWAP-206ENST00000537582 TMEM170BQ5T4T1 132 aa10.43□□□□□ -0.74
SFSWAP-206ENST00000537582 Q6ZR54 194 aa10.43□□□□□ -0.74
SFSWAP-206ENST00000537582 IGLV5-45A0A087WSX0 123 aa10.43□□□□□ -0.74
SFSWAP-206ENST00000537582 TRAV8-4A0A0B4J246 113 aa10.43□□□□□ -0.74
SFSWAP-206ENST00000537582 HERVK_113P63121 156 aa10.43□□□□□ -0.74
SFSWAP-206ENST00000537582 SEC11AP67812 179 aa10.43□□□□□ -0.74
SFSWAP-206ENST00000537582 HSD52Q0P140 79 aa10.43□□□□□ -0.74
SFSWAP-206ENST00000537582 CD164L2Q6UWJ8 174 aa10.43□□□□□ -0.74
SFSWAP-206ENST00000537582 MAPKAPK5-AS1Q8N8E1 139 aa10.43□□□□□ -0.74
SFSWAP-206ENST00000537582 C1orf43Q9BWL3 253 aa10.43□□□□□ -0.74
SFSWAP-206ENST00000537582 HYDINQ4G0P3 5121 aa10.42□□□□□ -0.74
SFSWAP-206ENST00000537582 IGHV3-64A0A075B6Q5 118 aa10.42□□□□□ -0.74
SFSWAP-206ENST00000537582 K7EP13 123 aa10.42□□□□□ -0.74
SFSWAP-206ENST00000537582 SPINK8P0C7L1 97 aa10.42□□□□□ -0.74
SFSWAP-206ENST00000537582 DNAH10Q8IVF4 4471 aa10.41□□□□□ -0.74
SFSWAP-206ENST00000537582 HIGD1BQ9P298 99 aa10.41□□□□□ -0.74
SFSWAP-206ENST00000537582 DNAH6Q9C0G6 4158 aa10.41□□□□□ -0.74
SFSWAP-206ENST00000537582 SACSQ9NZJ4 4579 aa10.4□□□□□ -0.74
SFSWAP-206ENST00000537582 TAX1BP3O14907 124 aa10.4□□□□□ -0.74
SFSWAP-206ENST00000537582 LCE6AA0A183 80 aa10.39□□□□□ -0.75
SFSWAP-206ENST00000537582 TMEM223A0PJW6 202 aa10.39□□□□□ -0.75
SFSWAP-206ENST00000537582 NMUP48645 174 aa10.39□□□□□ -0.75
SFSWAP-206ENST00000537582 PCP2Q8IVA1 136 aa10.39□□□□□ -0.75
SFSWAP-206ENST00000537582 A0A087WZ39 114 aa10.39□□□□□ -0.75
SFSWAP-206ENST00000537582 SMIM1B2RUZ4 78 aa10.39□□□□□ -0.75
SFSWAP-206ENST00000537582 IGKV2D-26A0A0A0MRZ7 120 aa10.38□□□□□ -0.75
SFSWAP-206ENST00000537582 COX7A2LO14548 114 aa10.38□□□□□ -0.75
SFSWAP-206ENST00000537582 Q6ZRN7 208 aaPredicted RBP10.38□□□□□ -0.75
SFSWAP-206ENST00000537582 DNAH2Q9P225 4427 aa10.37□□□□□ -0.75
SFSWAP-206ENST00000537582 LECT2O14960 151 aa10.36□□□□□ -0.75
SFSWAP-206ENST00000537582 UBE2V1Q13404 147 aa10.36□□□□□ -0.75
SFSWAP-206ENST00000537582 WFDC2Q14508 124 aa10.36□□□□□ -0.75
SFSWAP-206ENST00000537582 RMI2Q96E14 147 aa10.36□□□□□ -0.75
SFSWAP-206ENST00000537582 A6NDN8 102 aa10.35□□□□□ -0.75
SFSWAP-206ENST00000537582 H3BRM9 83 aa10.35□□□□□ -0.75
SFSWAP-206ENST00000537582 TSPEAR-AS2P59090 65 aa10.35□□□□□ -0.75
SFSWAP-206ENST00000537582 Q6ZVH6 145 aa10.35□□□□□ -0.75
SFSWAP-206ENST00000537582 C6orf223Q8N319 242 aa10.35□□□□□ -0.75
SFSWAP-206ENST00000537582 KMT2CQ8NEZ4 4911 aaKnown RBP10.35□□□□□ -0.75
SFSWAP-206ENST00000537582 MALP21145 153 aa10.35□□□□□ -0.75
SFSWAP-206ENST00000537582 C15orf56Q8N910 161 aa10.35□□□□□ -0.75
SFSWAP-206ENST00000537582 LINC00526Q96FQ7 95 aa10.35□□□□□ -0.75
SFSWAP-206ENST00000537582 TTTY13Q9BZ97 58 aa10.35□□□□□ -0.75
SFSWAP-206ENST00000537582 IGLV5-39A0A0G2JS06 123 aa10.34□□□□□ -0.75
SFSWAP-206ENST00000537582 E9PLD3 99 aa10.33□□□□□ -0.76
SFSWAP-206ENST00000537582 PSCAO43653 123 aa10.33□□□□□ -0.76
SFSWAP-206ENST00000537582 HIGD2BQ4VC39 106 aa10.33□□□□□ -0.76
SFSWAP-206ENST00000537582 TM2D2Q9BX73 214 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms