RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 U3KQA8 63 aa8.63□□□□□ -1.03
POLR1B-216ENST00000537335 ZNF580Q9UK33 172 aa8.63□□□□□ -1.03
POLR1B-216ENST00000537335 KLLNB2CW77 178 aa8.63□□□□□ -1.03
POLR1B-216ENST00000537335 H0Y9P7 68 aa8.63□□□□□ -1.03
POLR1B-216ENST00000537335 MSMPQ1L6U9 139 aa8.62□□□□□ -1.03
POLR1B-216ENST00000537335 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
POLR1B-216ENST00000537335 CDC42SE2Q9NRR3 84 aa8.62□□□□□ -1.03
POLR1B-216ENST00000537335 LINC00959A0A1B0GUT2 108 aa8.62□□□□□ -1.03
POLR1B-216ENST00000537335 PLXNB3Q9ULL4 1909 aa8.62□□□□□ -1.03
POLR1B-216ENST00000537335 FHL2Q14192 279 aa8.62□□□□□ -1.03
POLR1B-216ENST00000537335 MAPK1IP1LQ8NDC0 245 aa8.62□□□□□ -1.03
POLR1B-216ENST00000537335 C1orf137Q5JT78 98 aa8.61□□□□□ -1.03
POLR1B-216ENST00000537335 AMELXQ99217 191 aa8.61□□□□□ -1.03
POLR1B-216ENST00000537335 IGKV2-28A0A075B6P5 120 aa8.61□□□□□ -1.03
POLR1B-216ENST00000537335 HCG22E2RYF7 251 aa8.61□□□□□ -1.03
POLR1B-216ENST00000537335 IGKV2D-28P01615 120 aa8.61□□□□□ -1.03
POLR1B-216ENST00000537335 SRCAPQ6ZRS2 3230 aa8.61□□□□□ -1.03
POLR1B-216ENST00000537335 PCOTHQ58A44 107 aa8.61□□□□□ -1.03
POLR1B-216ENST00000537335 ADAMTS9Q9P2N4 1935 aa8.61□□□□□ -1.03
POLR1B-216ENST00000537335 C8orf87E5RJ46 101 aa8.61□□□□□ -1.03
POLR1B-216ENST00000537335 COX8CQ7Z4L0 72 aa8.61□□□□□ -1.03
POLR1B-216ENST00000537335 IL17DQ8TAD2 202 aa8.61□□□□□ -1.03
POLR1B-216ENST00000537335 LINC01561Q8N1V8 128 aa8.6□□□□□ -1.03
POLR1B-216ENST00000537335 ANAPC1Q9H1A4 1944 aa8.6□□□□□ -1.03
POLR1B-216ENST00000537335 LINC01548A6NM66 108 aa8.6□□□□□ -1.03
POLR1B-216ENST00000537335 TNFRSF13BO14836 293 aaPredicted RBP8.6□□□□□ -1.03
POLR1B-216ENST00000537335 EML5Q05BV3 1969 aa8.6□□□□□ -1.03
POLR1B-216ENST00000537335 IGHV4-61A0A0C4DH41 118 aa8.59□□□□□ -1.03
POLR1B-216ENST00000537335 ZNF462Q96JM2 2506 aa8.59□□□□□ -1.03
POLR1B-216ENST00000537335 IGKV2-24A0A0C4DH68 120 aa8.59□□□□□ -1.03
POLR1B-216ENST00000537335 SYCNQ0VAF6 134 aa8.58□□□□□ -1.04
POLR1B-216ENST00000537335 CSPG4Q6UVK1 2322 aa8.58□□□□□ -1.04
POLR1B-216ENST00000537335 C10orf25Q5T742 122 aa8.58□□□□□ -1.04
POLR1B-216ENST00000537335 KIAA1671Q9BY89 1806 aa8.57□□□□□ -1.04
POLR1B-216ENST00000537335 ODF3BA8MYP8 253 aa8.57□□□□□ -1.04
POLR1B-216ENST00000537335 PRRC2AP48634 2157 aaKnown RBP8.57□□□□□ -1.04
POLR1B-216ENST00000537335 DEFB4AO15263 64 aa8.56□□□□□ -1.04
POLR1B-216ENST00000537335 PRM2P04554 102 aa8.56□□□□□ -1.04
POLR1B-216ENST00000537335 COX6A2Q02221 97 aa8.56□□□□□ -1.04
POLR1B-216ENST00000537335 ZFP36P26651 326 aaKnown RBP8.55□□□□□ -1.04
POLR1B-216ENST00000537335 LINC00337Q8N6G1 96 aa8.55□□□□□ -1.04
POLR1B-216ENST00000537335 LINC01546A6NGU7 62 aa8.55□□□□□ -1.04
POLR1B-216ENST00000537335 DEFB135Q30KP9 77 aa8.55□□□□□ -1.04
POLR1B-216ENST00000537335 Q9UF83 564 aa8.55□□□□□ -1.04
POLR1B-216ENST00000537335 LY6LH3BQJ8 138 aa8.55□□□□□ -1.04
POLR1B-216ENST00000537335 PRR3P79522 188 aaKnown RBP8.55□□□□□ -1.04
POLR1B-216ENST00000537335 OXLD1Q5BKU9 147 aa8.55□□□□□ -1.04
POLR1B-216ENST00000537335 GOLGB1Q14789 3259 aaKnown RBP8.54□□□□□ -1.04
POLR1B-216ENST00000537335 LINC00474Q9P2X8 69 aa8.54□□□□□ -1.04
POLR1B-216ENST00000537335 SPG11Q96JI7 2443 aa8.54□□□□□ -1.04
POLR1B-216ENST00000537335 FHL3Q13643 280 aa8.54□□□□□ -1.04
POLR1B-216ENST00000537335 EXPH5Q8NEV8 1989 aa8.54□□□□□ -1.04
POLR1B-216ENST00000537335 C9orf66Q5T8R8 295 aa8.54□□□□□ -1.04
POLR1B-216ENST00000537335 SMIM29Q86T20 159 aa8.54□□□□□ -1.04
POLR1B-216ENST00000537335 C1orf64Q8NEQ6 169 aa8.54□□□□□ -1.04
POLR1B-216ENST00000537335 CHCHD7Q9BUK0 85 aa8.54□□□□□ -1.04
POLR1B-216ENST00000537335 MRGPRG-AS1Q2M3A8 158 aa8.53□□□□□ -1.04
POLR1B-216ENST00000537335 A6NDX4 124 aa8.53□□□□□ -1.04
POLR1B-216ENST00000537335 C4orf3Q8WVX3 66 aa8.53□□□□□ -1.04
POLR1B-216ENST00000537335 DAZAP2Q15038 168 aaPredicted RBP8.53□□□□□ -1.04
POLR1B-216ENST00000537335 SPINK6Q6UWN8 80 aa8.53□□□□□ -1.04
POLR1B-216ENST00000537335 MDFIQ99750 246 aa8.53□□□□□ -1.04
POLR1B-216ENST00000537335 ANKHD1Q8IWZ3 2542 aaKnown RBP8.53□□□□□ -1.04
POLR1B-216ENST00000537335 F8W735 103 aaPredicted RBP8.52□□□□□ -1.04
POLR1B-216ENST00000537335 KTN1-AS1Q86SY8 53 aa8.52□□□□□ -1.05
POLR1B-216ENST00000537335 CYP4F30PQ9H0H9 118 aa8.52□□□□□ -1.05
POLR1B-216ENST00000537335 NUP210Q8TEM1 1887 aaPredicted RBP8.52□□□□□ -1.05
POLR1B-216ENST00000537335 CYSRT1A8MQ03 144 aa8.52□□□□□ -1.05
POLR1B-216ENST00000537335 A8MUN3 132 aa8.52□□□□□ -1.05
POLR1B-216ENST00000537335 TM2D3Q9BRN9 247 aa8.51□□□□□ -1.05
POLR1B-216ENST00000537335 ZNF106Q9H2Y7 1883 aaKnown RBP8.51□□□□□ -1.05
POLR1B-216ENST00000537335 TRAV10A0A0B4J240 114 aa8.51□□□□□ -1.05
POLR1B-216ENST00000537335 Q8N2B8 174 aa8.51□□□□□ -1.05
POLR1B-216ENST00000537335 A0A1B0GU69 56 aa8.5□□□□□ -1.05
POLR1B-216ENST00000537335 THSD7BQ9C0I4 1608 aa8.5□□□□□ -1.05
POLR1B-216ENST00000537335 UNQ6190/PRO20217Q6UXQ8 127 aa8.49□□□□□ -1.05
POLR1B-216ENST00000537335 GRNP28799 593 aaKnown RBP8.49□□□□□ -1.05
POLR1B-216ENST00000537335 C14orf177Q52M58 125 aa8.49□□□□□ -1.05
POLR1B-216ENST00000537335 SPATA3Q8NHX4 192 aa8.49□□□□□ -1.05
POLR1B-216ENST00000537335 Q96MF0 132 aa8.49□□□□□ -1.05
POLR1B-216ENST00000537335 DEFB114Q30KQ6 69 aa8.49□□□□□ -1.05
POLR1B-216ENST00000537335 IGFL2Q6UWQ7 119 aa8.49□□□□□ -1.05
POLR1B-216ENST00000537335 LCA10Q71F78 164 aa8.49□□□□□ -1.05
POLR1B-216ENST00000537335 SMCR5Q8TEV8 140 aa8.49□□□□□ -1.05
POLR1B-216ENST00000537335 RPL37AP8A6NKH3 93 aa8.48□□□□□ -1.05
POLR1B-216ENST00000537335 RETNLBQ9BQ08 111 aa8.48□□□□□ -1.05
POLR1B-216ENST00000537335 FSTL3O95633 263 aa8.48□□□□□ -1.05
POLR1B-216ENST00000537335 LOC100131303A0A0U1RQF7 123 aa8.48□□□□□ -1.05
POLR1B-216ENST00000537335 COL4A4P53420 1690 aaPredicted RBP8.48□□□□□ -1.05
POLR1B-216ENST00000537335 IGF2-ASQ6U949 168 aa8.48□□□□□ -1.05
POLR1B-216ENST00000537335 C9orf116Q5BN46 136 aaPredicted RBP8.47□□□□□ -1.05
POLR1B-216ENST00000537335 ATP11AUNQ6ZP68 121 aa8.47□□□□□ -1.05
POLR1B-216ENST00000537335 FAM218AQ96MZ4 157 aa8.47□□□□□ -1.05
POLR1B-216ENST00000537335 ERC2-IT1O76042 136 aa8.47□□□□□ -1.05
POLR1B-216ENST00000537335 KLKP1Q107X0 134 aa8.47□□□□□ -1.05
POLR1B-216ENST00000537335 C7orf65Q6ZTY9 151 aa8.47□□□□□ -1.05
POLR1B-216ENST00000537335 PIP4P1Q86T03 277 aa8.46□□□□□ -1.05
POLR1B-216ENST00000537335 PTPN13Q12923 2485 aa8.46□□□□□ -1.05
POLR1B-216ENST00000537335 A0A087WSZ3 146 aa8.46□□□□□ -1.06
POLR1B-216ENST00000537335 DEFB116Q30KQ4 102 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms