RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 G3V318 75 aa7.24□□□□□ -1.25
RFX4-204ENST00000536688 LOC110117498A0A087WWA1 95 aa7.23□□□□□ -1.25
RFX4-204ENST00000536688 ESRGQ1W209 222 aa7.23□□□□□ -1.25
RFX4-204ENST00000536688 RHPN1-AS1Q9BWJ2 59 aa7.23□□□□□ -1.25
RFX4-204ENST00000536688 HELZ2Q9BYK8 2649 aaKnown RBP7.23□□□□□ -1.25
RFX4-204ENST00000536688 DYNLRB2Q8TF09 96 aa7.23□□□□□ -1.25
RFX4-204ENST00000536688 USMG5Q96IX5 58 aa7.23□□□□□ -1.25
RFX4-204ENST00000536688 ACACAQ13085 2346 aa7.22□□□□□ -1.25
RFX4-204ENST00000536688 H3BUA1 57 aa7.22□□□□□ -1.25
RFX4-204ENST00000536688 K7EMT4 169 aa7.22□□□□□ -1.25
RFX4-204ENST00000536688 LINC01547P58512 204 aaPredicted RBP7.22□□□□□ -1.25
RFX4-204ENST00000536688 C11orf72Q8NBR9 251 aa7.22□□□□□ -1.25
RFX4-204ENST00000536688 IGHV3-38A0A0C4DH36 116 aa7.22□□□□□ -1.25
RFX4-204ENST00000536688 A0A1W2PRX2 142 aa7.22□□□□□ -1.25
RFX4-204ENST00000536688 SNRPD3P62318 126 aaKnown RBP7.22□□□□□ -1.25
RFX4-204ENST00000536688 IGHV3-53P01767 116 aa7.21□□□□□ -1.26
RFX4-204ENST00000536688 PDE6GP18545 87 aa7.21□□□□□ -1.26
RFX4-204ENST00000536688 IL17DQ8TAD2 202 aa7.21□□□□□ -1.26
RFX4-204ENST00000536688 MOB4Q9Y3A3 225 aa7.21□□□□□ -1.26
RFX4-204ENST00000536688 KALRNO60229 2985 aa7.21□□□□□ -1.26
RFX4-204ENST00000536688 LAMA5O15230 3695 aa7.21□□□□□ -1.26
RFX4-204ENST00000536688 TRAV10A0A0B4J240 114 aa7.2□□□□□ -1.26
RFX4-204ENST00000536688 CCL18P55774 89 aa7.2□□□□□ -1.26
RFX4-204ENST00000536688 Q8N814 137 aa7.2□□□□□ -1.26
RFX4-204ENST00000536688 Q8NA96 180 aa7.2□□□□□ -1.26
RFX4-204ENST00000536688 BPESC1Q9GZL8 116 aa7.2□□□□□ -1.26
RFX4-204ENST00000536688 POLEQ07864 2286 aa7.2□□□□□ -1.26
RFX4-204ENST00000536688 TRBV6-4A0A1B0GX49 114 aa7.2□□□□□ -1.26
RFX4-204ENST00000536688 CCL21O00585 134 aa7.2□□□□□ -1.26
RFX4-204ENST00000536688 SLPIP03973 132 aa7.2□□□□□ -1.26
RFX4-204ENST00000536688 Q6ZQT0 140 aa7.2□□□□□ -1.26
RFX4-204ENST00000536688 LYNX1G3V0Z9 82 aa7.19□□□□□ -1.26
RFX4-204ENST00000536688 LYNX1P0DP58 116 aa7.19□□□□□ -1.26
RFX4-204ENST00000536688 C5orf56Q8N8D9 126 aa7.19□□□□□ -1.26
RFX4-204ENST00000536688 TMEM254Q8TBM7 123 aa7.19□□□□□ -1.26
RFX4-204ENST00000536688 TEP1Q99973 2627 aaKnown RBP7.19□□□□□ -1.26
RFX4-204ENST00000536688 H3BQ85 93 aa7.19□□□□□ -1.26
RFX4-204ENST00000536688 SAA4P35542 130 aa7.19□□□□□ -1.26
RFX4-204ENST00000536688 COX7B2Q8TF08 81 aa7.19□□□□□ -1.26
RFX4-204ENST00000536688 LOC400499M0QZD8 3231 aa7.19□□□□□ -1.26
RFX4-204ENST00000536688 PRRC2CQ9Y520 2896 aaKnown RBP7.19□□□□□ -1.26
RFX4-204ENST00000536688 PTPN13Q12923 2485 aa7.18□□□□□ -1.26
RFX4-204ENST00000536688 ROS1P08922 2347 aa7.18□□□□□ -1.26
RFX4-204ENST00000536688 Q1T7F1 81 aa7.18□□□□□ -1.26
RFX4-204ENST00000536688 FAM229BQ4G0N7 80 aa7.18□□□□□ -1.26
RFX4-204ENST00000536688 OXLD1Q5BKU9 147 aa7.18□□□□□ -1.26
RFX4-204ENST00000536688 IGFL3Q6UXB1 125 aa7.18□□□□□ -1.26
RFX4-204ENST00000536688 MPLKIPQ8TAP9 179 aa7.18□□□□□ -1.26
RFX4-204ENST00000536688 PKDREJQ9NTG1 2253 aa7.17□□□□□ -1.26
RFX4-204ENST00000536688 K7EQD1 137 aa7.17□□□□□ -1.26
RFX4-204ENST00000536688 PROK1P58294 105 aa7.17□□□□□ -1.26
RFX4-204ENST00000536688 Q6ZVQ6 151 aa7.17□□□□□ -1.26
RFX4-204ENST00000536688 LINC01560Q8TB33 94 aa7.17□□□□□ -1.26
RFX4-204ENST00000536688 LINC00158P58513 81 aa7.16□□□□□ -1.26
RFX4-204ENST00000536688 C9orf66Q5T8R8 295 aa7.16□□□□□ -1.26
RFX4-204ENST00000536688 Q8N3U1 123 aa7.16□□□□□ -1.26
RFX4-204ENST00000536688 NREPQ16612 68 aa7.16□□□□□ -1.26
RFX4-204ENST00000536688 TM2D3Q9BRN9 247 aa7.16□□□□□ -1.26
RFX4-204ENST00000536688 C11orf68Q9H3H3 251 aaKnown RBP7.16□□□□□ -1.26
RFX4-204ENST00000536688 CDC42SE2Q9NRR3 84 aa7.16□□□□□ -1.26
RFX4-204ENST00000536688 PTPRQQ9UMZ3 2332 aa7.16□□□□□ -1.26
RFX4-204ENST00000536688 IGHV3-73A0A0B4J1V6 119 aa7.15□□□□□ -1.26
RFX4-204ENST00000536688 ZNF561-AS1K7EIQ3 104 aa7.15□□□□□ -1.26
RFX4-204ENST00000536688 FUSP35637 526 aaKnown RBP eCLIP7.15□□□□□ -1.26
RFX4-204ENST00000536688 Q6ZSN1 163 aa7.15□□□□□ -1.26
RFX4-204ENST00000536688 Q6ZTC4 211 aa7.15□□□□□ -1.26
RFX4-204ENST00000536688 C6orf223Q8N319 242 aa7.15□□□□□ -1.26
RFX4-204ENST00000536688 IGKV3-7A0A075B6H7 116 aa7.15□□□□□ -1.27
RFX4-204ENST00000536688 PRYO14603 147 aa7.15□□□□□ -1.27
RFX4-204ENST00000536688 SPINK13Q1W4C9 94 aa7.15□□□□□ -1.27
RFX4-204ENST00000536688 Q96MF0 132 aa7.15□□□□□ -1.27
RFX4-204ENST00000536688 SPENQ96T58 3664 aaKnown RBP7.14□□□□□ -1.27
RFX4-204ENST00000536688 PAX4O43316 350 aa7.14□□□□□ -1.27
RFX4-204ENST00000536688 HAMPP81172 84 aa7.14□□□□□ -1.27
RFX4-204ENST00000536688 Q6ZTI0 123 aa7.14□□□□□ -1.27
RFX4-204ENST00000536688 C11orf44Q8N8P7 122 aa7.14□□□□□ -1.27
RFX4-204ENST00000536688 K7EQG2 157 aa7.13□□□□□ -1.27
RFX4-204ENST00000536688 Q9UF83 564 aa7.13□□□□□ -1.27
RFX4-204ENST00000536688 ITPR1Q14643 2758 aa7.13□□□□□ -1.27
RFX4-204ENST00000536688 A8MTW9 85 aa7.13□□□□□ -1.27
RFX4-204ENST00000536688 IGHV4-38-2P0DP08 117 aa7.13□□□□□ -1.27
RFX4-204ENST00000536688 NTM-AS1Q6ZSK4 140 aa7.13□□□□□ -1.27
RFX4-204ENST00000536688 MGAQ8IWI9 3026 aa7.12□□□□□ -1.27
RFX4-204ENST00000536688 TRBV10-1A0A0K0K1A3 114 aa7.12□□□□□ -1.27
RFX4-204ENST00000536688 DOPEY1Q5JWR5 2465 aa7.11□□□□□ -1.27
RFX4-204ENST00000536688 MED13LQ71F56 2210 aa7.11□□□□□ -1.27
RFX4-204ENST00000536688 A0A096LNT2 108 aa7.11□□□□□ -1.27
RFX4-204ENST00000536688 BPY2O14599 106 aa7.11□□□□□ -1.27
RFX4-204ENST00000536688 BBC3Q96PG8 261 aaPredicted RBP7.11□□□□□ -1.27
RFX4-204ENST00000536688 hDV103S1A0JD37 113 aa7.1□□□□□ -1.27
RFX4-204ENST00000536688 NANOS2P60321 138 aaKnown RBP7.1□□□□□ -1.27
RFX4-204ENST00000536688 DAD1P61803 113 aa7.1□□□□□ -1.27
RFX4-204ENST00000536688 MYO18BQ8IUG5 2567 aa7.1□□□□□ -1.27
RFX4-204ENST00000536688 RP1L1Q8IWN7 2480 aaPredicted RBP7.09□□□□□ -1.27
RFX4-204ENST00000536688 LYRM9A8MSI8 78 aa7.09□□□□□ -1.27
RFX4-204ENST00000536688 IGKV3-20P01619 116 aa7.09□□□□□ -1.27
RFX4-204ENST00000536688 PRB1P04280 392 aa7.09□□□□□ -1.27
RFX4-204ENST00000536688 RETNQ9HD89 108 aa7.09□□□□□ -1.27
RFX4-204ENST00000536688 PLA2G2AP14555 144 aa7.09□□□□□ -1.27
RFX4-204ENST00000536688 OCR1Q9BZK8 76 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms