RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 AP5S1Q9NUS5 200 aa7.14□□□□□ -1.27
LMO3-213ENST00000536172 LINC00614P0C842 121 aa7.13□□□□□ -1.27
LMO3-213ENST00000536172 TIMM21Q9BVV7 248 aa7.13□□□□□ -1.27
LMO3-213ENST00000536172 VCX2Q9H322 139 aa7.13□□□□□ -1.27
LMO3-213ENST00000536172 CSDC2Q9Y534 153 aaKnown RBP7.13□□□□□ -1.27
LMO3-213ENST00000536172 C1orf196B1AJZ1 125 aa7.12□□□□□ -1.27
LMO3-213ENST00000536172 HNRNPA3P51991 378 aaKnown RBP7.12□□□□□ -1.27
LMO3-213ENST00000536172 CNBPP62633 177 aaKnown RBP7.12□□□□□ -1.27
LMO3-213ENST00000536172 CIRBPQ14011 172 aaKnown RBP7.12□□□□□ -1.27
LMO3-213ENST00000536172 C2orf66Q6UXQ4 117 aa7.12□□□□□ -1.27
LMO3-213ENST00000536172 SDIM1Q6ZPB5 146 aa7.12□□□□□ -1.27
LMO3-213ENST00000536172 SCGB3A1Q96QR1 104 aa7.12□□□□□ -1.27
LMO3-213ENST00000536172 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.12□□□□□ -1.27
LMO3-213ENST00000536172 IGLV4-60A0A075B6I1 120 aa7.11□□□□□ -1.27
LMO3-213ENST00000536172 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.11□□□□□ -1.27
LMO3-213ENST00000536172 ATP6V1G1O75348 118 aa7.11□□□□□ -1.27
LMO3-213ENST00000536172 TRGC2P03986 189 aa7.11□□□□□ -1.27
LMO3-213ENST00000536172 MALP21145 153 aa7.11□□□□□ -1.27
LMO3-213ENST00000536172 TEX43Q6ZNM6 134 aa7.11□□□□□ -1.27
LMO3-213ENST00000536172 TMEM141Q96I45 108 aa7.11□□□□□ -1.27
LMO3-213ENST00000536172 HMCN2Q8NDA2 5059 aa7.11□□□□□ -1.27
LMO3-213ENST00000536172 IGLV10-54A0A075B6I4 117 aa7.1□□□□□ -1.27
LMO3-213ENST00000536172 TRAV13-1A0A0B4J241 112 aa7.1□□□□□ -1.27
LMO3-213ENST00000536172 IFITM10A6NMD0 228 aa7.1□□□□□ -1.27
LMO3-213ENST00000536172 MT1HL1P0DM35 61 aa7.1□□□□□ -1.27
LMO3-213ENST00000536172 RPL39P62891 51 aaKnown RBP7.1□□□□□ -1.27
LMO3-213ENST00000536172 SEC11AP67812 179 aa7.1□□□□□ -1.27
LMO3-213ENST00000536172 KRTAP26-1Q6PEX3 210 aa7.1□□□□□ -1.27
LMO3-213ENST00000536172 CDC42SE2Q9NRR3 84 aa7.1□□□□□ -1.27
LMO3-213ENST00000536172 UBE2D4Q9Y2X8 147 aa7.1□□□□□ -1.27
LMO3-213ENST00000536172 PYGO1Q9Y3Y4 419 aa7.1□□□□□ -1.27
LMO3-213ENST00000536172 FAT3Q8TDW7 4589 aa7.1□□□□□ -1.27
LMO3-213ENST00000536172 IGHV3-64A0A075B6Q5 118 aa7.09□□□□□ -1.27
LMO3-213ENST00000536172 COLCA2A8K830 154 aa7.09□□□□□ -1.27
LMO3-213ENST00000536172 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.09□□□□□ -1.27
LMO3-213ENST00000536172 HSBP1O75506 76 aa7.09□□□□□ -1.27
LMO3-213ENST00000536172 SCO1O75880 301 aa7.09□□□□□ -1.27
LMO3-213ENST00000536172 NPSP0C0P6 89 aa7.09□□□□□ -1.27
LMO3-213ENST00000536172 NDUFA6P56556 154 aa7.09□□□□□ -1.27
LMO3-213ENST00000536172 MRPS36P82909 103 aaKnown RBP7.09□□□□□ -1.27
LMO3-213ENST00000536172 C18orf32Q8TCD1 76 aa7.09□□□□□ -1.27
LMO3-213ENST00000536172 CHCHD1Q96BP2 118 aaKnown RBP7.09□□□□□ -1.27
LMO3-213ENST00000536172 DPH3Q96FX2 82 aa7.09□□□□□ -1.27
LMO3-213ENST00000536172 PKHD1L1Q86WI1 4243 aa7.09□□□□□ -1.27
LMO3-213ENST00000536172 hDV102S1A0JD36 115 aa7.08□□□□□ -1.28
LMO3-213ENST00000536172 GAGE12HA6NDE8 117 aa7.08□□□□□ -1.28
LMO3-213ENST00000536172 APOMO95445 188 aa7.08□□□□□ -1.28
LMO3-213ENST00000536172 HBDP02042 147 aa7.08□□□□□ -1.28
LMO3-213ENST00000536172 XCL1P47992 114 aa7.08□□□□□ -1.28
LMO3-213ENST00000536172 ERASQ7Z444 233 aa7.08□□□□□ -1.28
LMO3-213ENST00000536172 CHCHD10Q8WYQ3 142 aaPredicted RBP7.08□□□□□ -1.28
LMO3-213ENST00000536172 TOMM6Q96B49 74 aa7.08□□□□□ -1.28
LMO3-213ENST00000536172 YPEL4Q96NS1 127 aa7.08□□□□□ -1.28
LMO3-213ENST00000536172 LINC00959A0A1B0GUT2 108 aa7.07□□□□□ -1.28
LMO3-213ENST00000536172 PANO1I0J062 215 aa7.07□□□□□ -1.28
LMO3-213ENST00000536172 ATP5LO75964 103 aa7.07□□□□□ -1.28
LMO3-213ENST00000536172 TIMM17AQ99595 171 aa7.07□□□□□ -1.28
LMO3-213ENST00000536172 UBR4Q5T4S7 5183 aa7.07□□□□□ -1.28
LMO3-213ENST00000536172 COX7A2LO14548 114 aa7.06□□□□□ -1.28
LMO3-213ENST00000536172 RNASE13Q5GAN3 156 aaKnown RBP7.06□□□□□ -1.28
LMO3-213ENST00000536172 CD164L2Q6UWJ8 174 aa7.06□□□□□ -1.28
LMO3-213ENST00000536172 C7orf33Q8WU49 177 aa7.06□□□□□ -1.28
LMO3-213ENST00000536172 GEMIN7Q9H840 131 aaKnown RBP7.06□□□□□ -1.28
LMO3-213ENST00000536172 A0A087WYN8 130 aa7.05□□□□□ -1.28
LMO3-213ENST00000536172 Q6ZUT4 128 aa7.05□□□□□ -1.28
LMO3-213ENST00000536172 SPACA4Q8TDM5 124 aa7.05□□□□□ -1.28
LMO3-213ENST00000536172 PLAC8Q9NZF1 115 aa7.05□□□□□ -1.28
LMO3-213ENST00000536172 LINC01546A6NGU7 62 aa7.04□□□□□ -1.28
LMO3-213ENST00000536172 ZNF561-AS1K7EIQ3 104 aa7.04□□□□□ -1.28
LMO3-213ENST00000536172 PACRGQ96M98 296 aaPredicted RBP7.04□□□□□ -1.28
LMO3-213ENST00000536172 HSPB8Q9UJY1 196 aa7.04□□□□□ -1.28
LMO3-213ENST00000536172 IGLV4-3A0A075B6K6 122 aa7.03□□□□□ -1.28
LMO3-213ENST00000536172 IGHV1-58A0A0C4DH39 117 aa7.03□□□□□ -1.28
LMO3-213ENST00000536172 PMVKQ15126 192 aa7.03□□□□□ -1.28
LMO3-213ENST00000536172 OPRPNQ99935 248 aaPredicted RBP7.03□□□□□ -1.28
LMO3-213ENST00000536172 PKIGQ9Y2B9 76 aa7.03□□□□□ -1.28
LMO3-213ENST00000536172 IGIPA6NJ69 53 aa7.02□□□□□ -1.29
LMO3-213ENST00000536172 SLPIP03973 132 aa7.02□□□□□ -1.29
LMO3-213ENST00000536172 PRSS2P07478 247 aa7.02□□□□□ -1.29
LMO3-213ENST00000536172 HERVK_113P63121 156 aa7.02□□□□□ -1.29
LMO3-213ENST00000536172 LINC01600Q96MT4 127 aa7.02□□□□□ -1.29
LMO3-213ENST00000536172 H3BRM9 83 aa7.01□□□□□ -1.29
LMO3-213ENST00000536172 LEPROTL1O95214 131 aa7.01□□□□□ -1.29
LMO3-213ENST00000536172 S100A6P06703 90 aa7.01□□□□□ -1.29
LMO3-213ENST00000536172 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
LMO3-213ENST00000536172 PMCHL1Q16048 86 aa7.01□□□□□ -1.29
LMO3-213ENST00000536172 C5orf38Q86SI9 138 aa7.01□□□□□ -1.29
LMO3-213ENST00000536172 SERF1AO75920 110 aa7□□□□□ -1.29
LMO3-213ENST00000536172 LINC00469Q8N7U9 141 aa7□□□□□ -1.29
LMO3-213ENST00000536172 CST9LQ9H4G1 147 aa7□□□□□ -1.29
LMO3-213ENST00000536172 LINC00474Q9P2X8 69 aa7□□□□□ -1.29
LMO3-213ENST00000536172 COX6A2Q02221 97 aa6.99□□□□□ -1.29
LMO3-213ENST00000536172 FOXI1Q12951 378 aa6.99□□□□□ -1.29
LMO3-213ENST00000536172 C15orf56Q8N910 161 aa6.99□□□□□ -1.29
LMO3-213ENST00000536172 IFI27L1Q96BM0 104 aa6.99□□□□□ -1.29
LMO3-213ENST00000536172 AMELXQ99217 191 aa6.99□□□□□ -1.29
LMO3-213ENST00000536172 MAP1LC3CQ9BXW4 147 aa6.99□□□□□ -1.29
LMO3-213ENST00000536172 H0Y8G0 127 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 HIST1H2BKO60814 126 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 HIST1H2BJP06899 126 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms