RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 DOPEY2Q9Y3R5 2298 aa4.83□□□□□ -1.64
CPSF7-215ENST00000536145 DMXL2Q8TDJ6 3036 aa4.83□□□□□ -1.64
CPSF7-215ENST00000536145 IGHV4-30-2A0A087WSY4 118 aa4.83□□□□□ -1.64
CPSF7-215ENST00000536145 A0A087WZ39 114 aa4.83□□□□□ -1.64
CPSF7-215ENST00000536145 JMJD7-PLA2G4BH0Y9G9 81 aa4.83□□□□□ -1.64
CPSF7-215ENST00000536145 FSHBP01225 129 aa4.83□□□□□ -1.64
CPSF7-215ENST00000536145 SLURP1P55000 103 aa4.83□□□□□ -1.64
CPSF7-215ENST00000536145 LINC00158P58513 81 aa4.83□□□□□ -1.64
CPSF7-215ENST00000536145 HRCT1Q6UXD1 115 aa4.83□□□□□ -1.64
CPSF7-215ENST00000536145 C18orf65Q6ZTR6 163 aa4.83□□□□□ -1.64
CPSF7-215ENST00000536145 FAM19A1Q7Z5A9 133 aa4.83□□□□□ -1.64
CPSF7-215ENST00000536145 ABCA2Q9BZC7 2435 aa4.83□□□□□ -1.64
CPSF7-215ENST00000536145 TPRP12270 2363 aaKnown RBP4.83□□□□□ -1.64
CPSF7-215ENST00000536145 XCL1P47992 114 aa4.82□□□□□ -1.64
CPSF7-215ENST00000536145 DEFB114Q30KQ6 69 aa4.82□□□□□ -1.64
CPSF7-215ENST00000536145 XCL2Q9UBD3 114 aa4.82□□□□□ -1.64
CPSF7-215ENST00000536145 SERP1Q9Y6X1 66 aa4.82□□□□□ -1.64
CPSF7-215ENST00000536145 IGF2RP11717 2491 aa4.82□□□□□ -1.64
CPSF7-215ENST00000536145 BSNQ9UPA5 3926 aa4.81□□□□□ -1.64
CPSF7-215ENST00000536145 IGLV4-60A0A075B6I1 120 aa4.81□□□□□ -1.64
CPSF7-215ENST00000536145 TRAV7A0A075B6U4 112 aa4.81□□□□□ -1.64
CPSF7-215ENST00000536145 TRGV1A0A0A0MS02 117 aa4.81□□□□□ -1.64
CPSF7-215ENST00000536145 FAM236DA0A1B0GTK5 79 aa4.81□□□□□ -1.64
CPSF7-215ENST00000536145 A0A1W2PRX2 142 aa4.81□□□□□ -1.64
CPSF7-215ENST00000536145 PLAC8L1A1L4L8 177 aa4.81□□□□□ -1.64
CPSF7-215ENST00000536145 H7BZZ5 65 aa4.81□□□□□ -1.64
CPSF7-215ENST00000536145 FAM236CP0DP71 79 aa4.81□□□□□ -1.64
CPSF7-215ENST00000536145 ODF3L2Q3SX64 289 aa4.81□□□□□ -1.64
CPSF7-215ENST00000536145 Q6ZTI0 123 aa4.81□□□□□ -1.64
CPSF7-215ENST00000536145 Q8N814 137 aa4.81□□□□□ -1.64
CPSF7-215ENST00000536145 CFAP47Q6ZTR5 3102 aa4.81□□□□□ -1.64
CPSF7-215ENST00000536145 MGAQ8IWI9 3026 aa4.8□□□□□ -1.64
CPSF7-215ENST00000536145 LOC110117498A0A087WWA1 95 aa4.8□□□□□ -1.64
CPSF7-215ENST00000536145 LOC100131303A0A0U1RQF7 123 aa4.8□□□□□ -1.64
CPSF7-215ENST00000536145 B4DSR2 109 aa4.8□□□□□ -1.64
CPSF7-215ENST00000536145 C6orf223Q8N319 242 aa4.8□□□□□ -1.64
CPSF7-215ENST00000536145 LINC00482Q8N8I6 264 aa4.8□□□□□ -1.64
CPSF7-215ENST00000536145 MRAPQ8TCY5 172 aa4.8□□□□□ -1.64
CPSF7-215ENST00000536145 ACACBO00763 2458 aa4.8□□□□□ -1.64
CPSF7-215ENST00000536145 TRAV23DV6A0A075B6W5 121 aa4.79□□□□□ -1.64
CPSF7-215ENST00000536145 PAX4O43316 350 aa4.79□□□□□ -1.64
CPSF7-215ENST00000536145 GIG44P09565 113 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-215ENST00000536145 KLKP1Q107X0 134 aa4.79□□□□□ -1.64
CPSF7-215ENST00000536145 ENHOQ6UWT2 76 aa4.79□□□□□ -1.64
CPSF7-215ENST00000536145 Q6YL49 198 aa4.79□□□□□ -1.64
CPSF7-215ENST00000536145 Q6ZQT0 140 aa4.79□□□□□ -1.64
CPSF7-215ENST00000536145 C11orf44Q8N8P7 122 aa4.79□□□□□ -1.64
CPSF7-215ENST00000536145 WFDC9Q8NEX5 89 aa4.79□□□□□ -1.64
CPSF7-215ENST00000536145 C16orf95Q9H693 158 aa4.79□□□□□ -1.64
CPSF7-215ENST00000536145 TOMM7Q9P0U1 55 aa4.79□□□□□ -1.64
CPSF7-215ENST00000536145 DSPP15924 2871 aaKnown RBP4.79□□□□□ -1.64
CPSF7-215ENST00000536145 PRRC2CQ9Y520 2896 aaKnown RBP4.79□□□□□ -1.64
CPSF7-215ENST00000536145 CEP295Q9C0D2 2601 aa4.78□□□□□ -1.64
CPSF7-215ENST00000536145 TRBV6-8A0A0A6YYG3 113 aa4.78□□□□□ -1.64
CPSF7-215ENST00000536145 LINC00959A0A1B0GUT2 108 aa4.78□□□□□ -1.64
CPSF7-215ENST00000536145 J3QKU1 62 aa4.78□□□□□ -1.64
CPSF7-215ENST00000536145 J3QLI3 93 aa4.78□□□□□ -1.64
CPSF7-215ENST00000536145 TMEM256-PLSCR3K7ERE1 68 aa4.78□□□□□ -1.64
CPSF7-215ENST00000536145 UBE2L6O14933 153 aa4.78□□□□□ -1.64
CPSF7-215ENST00000536145 PFN2P35080 140 aa4.78□□□□□ -1.64
CPSF7-215ENST00000536145 DEFB136Q30KP8 78 aa4.78□□□□□ -1.64
CPSF7-215ENST00000536145 Q8IZM0 81 aa4.78□□□□□ -1.64
CPSF7-215ENST00000536145 C20orf197Q8N268 126 aa4.78□□□□□ -1.64
CPSF7-215ENST00000536145 C4orf3Q8WVX3 66 aa4.78□□□□□ -1.64
CPSF7-215ENST00000536145 MAP1BP46821 2468 aaKnown RBP4.77□□□□□ -1.65
CPSF7-215ENST00000536145 M0R2N4 97 aa4.77□□□□□ -1.65
CPSF7-215ENST00000536145 PLA2G2AP14555 144 aa4.77□□□□□ -1.65
CPSF7-215ENST00000536145 KIAA0087Q14695 138 aa4.77□□□□□ -1.65
CPSF7-215ENST00000536145 LINC00575Q6W349 94 aa4.77□□□□□ -1.65
CPSF7-215ENST00000536145 DYNLRB2Q8TF09 96 aa4.77□□□□□ -1.65
CPSF7-215ENST00000536145 CCL19Q99731 98 aa4.77□□□□□ -1.65
CPSF7-215ENST00000536145 CHD8Q9HCK8 2581 aa4.77□□□□□ -1.65
CPSF7-215ENST00000536145 TRAV10A0A0B4J240 114 aa4.76□□□□□ -1.65
CPSF7-215ENST00000536145 DSCR9P59020 149 aa4.76□□□□□ -1.65
CPSF7-215ENST00000536145 C9orf66Q5T8R8 295 aa4.76□□□□□ -1.65
CPSF7-215ENST00000536145 FP248Q71RG6 208 aaPredicted RBP4.76□□□□□ -1.65
CPSF7-215ENST00000536145 LINC01356Q8N9X3 169 aa4.76□□□□□ -1.65
CPSF7-215ENST00000536145 Q8NDZ9 215 aa4.76□□□□□ -1.65
CPSF7-215ENST00000536145 UBL5Q9BZL1 73 aa4.76□□□□□ -1.65
CPSF7-215ENST00000536145 COL6A6A6NMZ7 2263 aa4.76□□□□□ -1.65
CPSF7-215ENST00000536145 ANKRD11Q6UB99 2663 aaPredicted RBP4.75□□□□□ -1.65
CPSF7-215ENST00000536145 ANKHD1Q8IWZ3 2542 aaKnown RBP4.75□□□□□ -1.65
CPSF7-215ENST00000536145 SMIM26A0A096LP01 95 aa4.75□□□□□ -1.65
CPSF7-215ENST00000536145 IGHV4-28A0A0C4DH34 117 aa4.75□□□□□ -1.65
CPSF7-215ENST00000536145 ZNF561-AS1K7EIQ3 104 aa4.75□□□□□ -1.65
CPSF7-215ENST00000536145 LINC01547P58512 204 aaPredicted RBP4.75□□□□□ -1.65
CPSF7-215ENST00000536145 C4orf48Q5BLP8 95 aa4.75□□□□□ -1.65
CPSF7-215ENST00000536145 Q6ZVQ6 151 aa4.75□□□□□ -1.65
CPSF7-215ENST00000536145 STHQ8IWL8 128 aa4.75□□□□□ -1.65
CPSF7-215ENST00000536145 TMEM86BQ8N661 226 aa4.75□□□□□ -1.65
CPSF7-215ENST00000536145 LINC00612Q8N6U2 182 aa4.75□□□□□ -1.65
CPSF7-215ENST00000536145 C16orf74Q96GX8 76 aa4.75□□□□□ -1.65
CPSF7-215ENST00000536145 NOP10Q9NPE3 64 aaKnown RBP4.75□□□□□ -1.65
CPSF7-215ENST00000536145 SPENQ96T58 3664 aaKnown RBP4.75□□□□□ -1.65
CPSF7-215ENST00000536145 PKD1L2Q7Z442 2459 aa4.74□□□□□ -1.65
CPSF7-215ENST00000536145 PRR3P79522 188 aaKnown RBP4.74□□□□□ -1.65
CPSF7-215ENST00000536145 CXCL6P80162 114 aa4.74□□□□□ -1.65
CPSF7-215ENST00000536145 COX17Q14061 63 aa4.74□□□□□ -1.65
CPSF7-215ENST00000536145 LINC00336Q6ZUF6 198 aa4.74□□□□□ -1.65
CPSF7-215ENST00000536145 CSNK1G2-AS1Q8NCQ2 148 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms