RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 COX6A2Q02221 97 aa8.16□□□□□ -1.1
VPS37C-203ENST00000536000 SYCNQ0VAF6 134 aa8.16□□□□□ -1.1
VPS37C-203ENST00000536000 Q6ZN92 141 aa8.16□□□□□ -1.1
VPS37C-203ENST00000536000 TEX43Q6ZNM6 134 aa8.16□□□□□ -1.1
VPS37C-203ENST00000536000 VCX2Q9H322 139 aa8.16□□□□□ -1.1
VPS37C-203ENST00000536000 DNAH8Q96JB1 4490 aa8.16□□□□□ -1.1
VPS37C-203ENST00000536000 IGLV4-69A0A075B6H9 119 aa8.15□□□□□ -1.1
VPS37C-203ENST00000536000 TGIF2-C20orf24A0A0A6YYL0 155 aa8.15□□□□□ -1.1
VPS37C-203ENST00000536000 C2orf88Q9BSF0 95 aa8.15□□□□□ -1.1
VPS37C-203ENST00000536000 TRAPPC1Q9Y5R8 145 aa8.15□□□□□ -1.1
VPS37C-203ENST00000536000 IGHV3OR16-9A0A0B4J2B5 98 aa8.14□□□□□ -1.11
VPS37C-203ENST00000536000 PANO1I0J062 215 aa8.14□□□□□ -1.11
VPS37C-203ENST00000536000 NPSP0C0P6 89 aa8.14□□□□□ -1.11
VPS37C-203ENST00000536000 PAPPA-AS1Q5QFB9 102 aa8.14□□□□□ -1.11
VPS37C-203ENST00000536000 CARD19Q96LW7 228 aa8.14□□□□□ -1.11
VPS37C-203ENST00000536000 PKIGQ9Y2B9 76 aa8.14□□□□□ -1.11
VPS37C-203ENST00000536000 IGIPA6NJ69 53 aa8.13□□□□□ -1.11
VPS37C-203ENST00000536000 CHTF8P0CG12 524 aa8.13□□□□□ -1.11
VPS37C-203ENST00000536000 CIRBPQ14011 172 aaKnown RBP8.13□□□□□ -1.11
VPS37C-203ENST00000536000 LINC00242Q5T6M2 205 aa8.13□□□□□ -1.11
VPS37C-203ENST00000536000 ZC2HC1BQ5TFG8 222 aa8.13□□□□□ -1.11
VPS37C-203ENST00000536000 FA2HQ7L5A8 372 aa8.13□□□□□ -1.11
VPS37C-203ENST00000536000 TOMM6Q96B49 74 aa8.13□□□□□ -1.11
VPS37C-203ENST00000536000 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
VPS37C-203ENST00000536000 AMELXQ99217 191 aa8.13□□□□□ -1.11
VPS37C-203ENST00000536000 A0A087WYN8 130 aa8.12□□□□□ -1.11
VPS37C-203ENST00000536000 IGKV2-24A0A0C4DH68 120 aa8.12□□□□□ -1.11
VPS37C-203ENST00000536000 LINC01549A6NIU2 74 aa8.12□□□□□ -1.11
VPS37C-203ENST00000536000 UBE2D1P51668 147 aa8.12□□□□□ -1.11
VPS37C-203ENST00000536000 MAJINQ3KP22 176 aa8.12□□□□□ -1.11
VPS37C-203ENST00000536000 OR10D4PQ8NGN7 298 aa8.12□□□□□ -1.11
VPS37C-203ENST00000536000 ORAOV1Q8WV07 137 aa8.12□□□□□ -1.11
VPS37C-203ENST00000536000 C2orf48Q96LS8 159 aa8.12□□□□□ -1.11
VPS37C-203ENST00000536000 SCGB3A1Q96QR1 104 aa8.12□□□□□ -1.11
VPS37C-203ENST00000536000 SMCO4Q9NRQ5 59 aa8.12□□□□□ -1.11
VPS37C-203ENST00000536000 SPAG11BQ08648 103 aa8.11□□□□□ -1.11
VPS37C-203ENST00000536000 Q6ZRU5 148 aa8.11□□□□□ -1.11
VPS37C-203ENST00000536000 ERASQ7Z444 233 aa8.11□□□□□ -1.11
VPS37C-203ENST00000536000 SPACA4Q8TDM5 124 aa8.11□□□□□ -1.11
VPS37C-203ENST00000536000 TIMM17AQ99595 171 aa8.11□□□□□ -1.11
VPS37C-203ENST00000536000 A0A087WZ39 114 aa8.1□□□□□ -1.11
VPS37C-203ENST00000536000 LINC01546A6NGU7 62 aa8.1□□□□□ -1.11
VPS37C-203ENST00000536000 F8WDY8 70 aa8.1□□□□□ -1.11
VPS37C-203ENST00000536000 LINC00173Q6ZV60 143 aa8.1□□□□□ -1.11
VPS37C-203ENST00000536000 LINC00474Q9P2X8 69 aa8.1□□□□□ -1.11
VPS37C-203ENST00000536000 A0A096LNI7 61 aa8.09□□□□□ -1.11
VPS37C-203ENST00000536000 LOC107984640A0A0U1RRK4 108 aa8.09□□□□□ -1.11
VPS37C-203ENST00000536000 SEC11AP67812 179 aa8.09□□□□□ -1.11
VPS37C-203ENST00000536000 SLC7A5P1Q8MH63 180 aa8.09□□□□□ -1.11
VPS37C-203ENST00000536000 NDUFA1O15239 70 aa8.08□□□□□ -1.12
VPS37C-203ENST00000536000 LINC00614P0C842 121 aa8.08□□□□□ -1.12
VPS37C-203ENST00000536000 RPL37AP61513 92 aaKnown RBP8.08□□□□□ -1.12
VPS37C-203ENST00000536000 GAGE2BQ13066 116 aa8.08□□□□□ -1.12
VPS37C-203ENST00000536000 RNF151Q2KHN1 245 aa8.08□□□□□ -1.12
VPS37C-203ENST00000536000 LINC01561Q8N1V8 128 aa8.08□□□□□ -1.12
VPS37C-203ENST00000536000 STPG4Q8N801 248 aa8.08□□□□□ -1.12
VPS37C-203ENST00000536000 C18orf32Q8TCD1 76 aa8.08□□□□□ -1.12
VPS37C-203ENST00000536000 PLAC8Q9NZF1 115 aa8.08□□□□□ -1.12
VPS37C-203ENST00000536000 FLG2Q5D862 2391 aaPredicted RBP8.08□□□□□ -1.12
VPS37C-203ENST00000536000 FAT1Q14517 4588 aa8.08□□□□□ -1.12
VPS37C-203ENST00000536000 ABCA13Q86UQ4 5058 aa8.07□□□□□ -1.12
VPS37C-203ENST00000536000 SRRM2Q9UQ35 2752 aaKnown RBP8.07□□□□□ -1.12
VPS37C-203ENST00000536000 FAM19A3Q7Z5A8 133 aa8.07□□□□□ -1.12
VPS37C-203ENST00000536000 GEMIN7Q9H840 131 aaKnown RBP8.07□□□□□ -1.12
VPS37C-203ENST00000536000 PCLOQ9Y6V0 5065 aa8.07□□□□□ -1.12
VPS37C-203ENST00000536000 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
VPS37C-203ENST00000536000 A0A0J9YXV3 536 aa8.06□□□□□ -1.12
VPS37C-203ENST00000536000 PTTG1IPP53801 180 aa8.06□□□□□ -1.12
VPS37C-203ENST00000536000 RAB5BP61020 215 aa8.06□□□□□ -1.12
VPS37C-203ENST00000536000 HERVK_113P63121 156 aa8.06□□□□□ -1.12
VPS37C-203ENST00000536000 UNQ6190/PRO20217Q6UXQ8 127 aa8.06□□□□□ -1.12
VPS37C-203ENST00000536000 MRPL35Q9NZE8 188 aaKnown RBP8.06□□□□□ -1.12
VPS37C-203ENST00000536000 KIAA0087Q14695 138 aa8.05□□□□□ -1.12
VPS37C-203ENST00000536000 C7orf33Q8WU49 177 aa8.05□□□□□ -1.12
VPS37C-203ENST00000536000 YPEL4Q96NS1 127 aa8.05□□□□□ -1.12
VPS37C-203ENST00000536000 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.04□□□□□ -1.12
VPS37C-203ENST00000536000 PRSS2P07478 247 aa8.04□□□□□ -1.12
VPS37C-203ENST00000536000 KRTAP10-4P60372 401 aaPredicted RBP8.04□□□□□ -1.12
VPS37C-203ENST00000536000 RPL18AQ02543 176 aaKnown RBP8.04□□□□□ -1.12
VPS37C-203ENST00000536000 PMVKQ15126 192 aa8.04□□□□□ -1.12
VPS37C-203ENST00000536000 C6orf226Q5I0X4 101 aa8.04□□□□□ -1.12
VPS37C-203ENST00000536000 C10orf25Q5T742 122 aa8.04□□□□□ -1.12
VPS37C-203ENST00000536000 CBLN2Q8IUK8 224 aa8.04□□□□□ -1.12
VPS37C-203ENST00000536000 URB1-AS1Q96HZ7 61 aa8.04□□□□□ -1.12
VPS37C-203ENST00000536000 PACRGQ96M98 296 aaPredicted RBP8.04□□□□□ -1.12
VPS37C-203ENST00000536000 CST9LQ9H4G1 147 aa8.04□□□□□ -1.12
VPS37C-203ENST00000536000 TOMM7Q9P0U1 55 aa8.04□□□□□ -1.12
VPS37C-203ENST00000536000 CDKN2A-AS1Q9UH64 79 aa8.04□□□□□ -1.12
VPS37C-203ENST00000536000 TINCRA0A1B0GVN0 87 aa8.02□□□□□ -1.13
VPS37C-203ENST00000536000 HBDP02042 147 aa8.02□□□□□ -1.13
VPS37C-203ENST00000536000 NDUFA6P56556 154 aa8.02□□□□□ -1.13
VPS37C-203ENST00000536000 C2orf82Q6UX34 121 aa8.02□□□□□ -1.13
VPS37C-203ENST00000536000 LINC00469Q8N7U9 141 aa8.02□□□□□ -1.13
VPS37C-203ENST00000536000 C6orf48Q9UBA6 75 aa8.02□□□□□ -1.13
VPS37C-203ENST00000536000 TRBV30A0A0K0K1B3 111 aa8.01□□□□□ -1.13
VPS37C-203ENST00000536000 CKS1BP61024 79 aa8.01□□□□□ -1.13
VPS37C-203ENST00000536000 A0A096LNJ9 63 aa8□□□□□ -1.13
VPS37C-203ENST00000536000 ATP5LO75964 103 aa8□□□□□ -1.13
VPS37C-203ENST00000536000 TLX1NBP0CAT3 122 aa8□□□□□ -1.13
VPS37C-203ENST00000536000 PMCHL1Q16048 86 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms