RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 Q6ZN92 141 aa9.06□□□□□ -0.96
VPS11-205ENST00000534551 SCGB3A1Q96QR1 104 aa9.06□□□□□ -0.96
VPS11-205ENST00000534551 TIMM17AQ99595 171 aa9.06□□□□□ -0.96
VPS11-205ENST00000534551 IGHV3OR16-9A0A0B4J2B5 98 aa9.05□□□□□ -0.96
VPS11-205ENST00000534551 IGHV1-58A0A0C4DH39 117 aa9.05□□□□□ -0.96
VPS11-205ENST00000534551 CNBPP62633 177 aaKnown RBP9.05□□□□□ -0.96
VPS11-205ENST00000534551 C2orf88Q9BSF0 95 aa9.05□□□□□ -0.96
VPS11-205ENST00000534551 LINC00614P0C842 121 aa9.04□□□□□ -0.96
VPS11-205ENST00000534551 MALP21145 153 aa9.04□□□□□ -0.96
VPS11-205ENST00000534551 CFAP161Q6P656 301 aa9.04□□□□□ -0.96
VPS11-205ENST00000534551 Q6ZSA8 131 aa9.04□□□□□ -0.96
VPS11-205ENST00000534551 VCX2Q9H322 139 aa9.04□□□□□ -0.96
VPS11-205ENST00000534551 PANO1I0J062 215 aa9.03□□□□□ -0.96
VPS11-205ENST00000534551 LINC00310P59036 64 aa9.03□□□□□ -0.96
VPS11-205ENST00000534551 ERASQ7Z444 233 aa9.03□□□□□ -0.96
VPS11-205ENST00000534551 C9orf163Q8N9P6 203 aa9.03□□□□□ -0.96
VPS11-205ENST00000534551 HBDP02042 147 aa9.02□□□□□ -0.97
VPS11-205ENST00000534551 CHTF8P0CG12 524 aa9.02□□□□□ -0.97
VPS11-205ENST00000534551 ORAOV1Q8WV07 137 aa9.02□□□□□ -0.97
VPS11-205ENST00000534551 KRTAP4-5Q9BYR2 181 aa9.02□□□□□ -0.97
VPS11-205ENST00000534551 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.02□□□□□ -0.97
VPS11-205ENST00000534551 IGLV4-69A0A075B6H9 119 aa9.01□□□□□ -0.97
VPS11-205ENST00000534551 ATP6V1G1O75348 118 aa9.01□□□□□ -0.97
VPS11-205ENST00000534551 NPSP0C0P6 89 aa9.01□□□□□ -0.97
VPS11-205ENST00000534551 G0S2P27469 103 aa9.01□□□□□ -0.97
VPS11-205ENST00000534551 SPAG11BQ08648 103 aa9.01□□□□□ -0.97
VPS11-205ENST00000534551 SCXQ7RTU7 201 aa9.01□□□□□ -0.97
VPS11-205ENST00000534551 A0A0J9YXV3 536 aa9□□□□□ -0.97
VPS11-205ENST00000534551 PDZD11Q5EBL8 140 aa9□□□□□ -0.97
VPS11-205ENST00000534551 CARD19Q96LW7 228 aa9□□□□□ -0.97
VPS11-205ENST00000534551 IGHV3-64A0A075B6Q5 118 aa8.99□□□□□ -0.97
VPS11-205ENST00000534551 ZNF561-AS1K7EIQ3 104 aa8.99□□□□□ -0.97
VPS11-205ENST00000534551 SMR3BP02814 79 aaPredicted RBP8.99□□□□□ -0.97
VPS11-205ENST00000534551 RAB5BP61020 215 aa8.99□□□□□ -0.97
VPS11-205ENST00000534551 Q6ZRU5 148 aa8.99□□□□□ -0.97
VPS11-205ENST00000534551 BAGE3Q86Y29 109 aa8.99□□□□□ -0.97
VPS11-205ENST00000534551 ABCA13Q86UQ4 5058 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 A0A087WZ39 114 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.98□□□□□ -0.97
VPS11-205ENST00000534551 SERF1AO75920 110 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 PAPPA-AS1Q5QFB9 102 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 SDIM1Q6ZPB5 146 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 FAM19A2Q8N3H0 131 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 CHCHD1Q96BP2 118 aaKnown RBP8.98□□□□□ -0.97
VPS11-205ENST00000534551 CST9LQ9H4G1 147 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 CDKN2A-AS1Q9UH64 79 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.97□□□□□ -0.97
VPS11-205ENST00000534551 NUPR1O60356 82 aa8.97□□□□□ -0.97
VPS11-205ENST00000534551 APOMO95445 188 aa8.97□□□□□ -0.97
VPS11-205ENST00000534551 NDUFA6P56556 154 aa8.97□□□□□ -0.97
VPS11-205ENST00000534551 SYCNQ0VAF6 134 aa8.97□□□□□ -0.97
VPS11-205ENST00000534551 PMVKQ15126 192 aa8.97□□□□□ -0.97
VPS11-205ENST00000534551 FAM19A3Q7Z5A8 133 aa8.97□□□□□ -0.97
VPS11-205ENST00000534551 HSBP1O75506 76 aa8.96□□□□□ -0.98
VPS11-205ENST00000534551 C10orf25Q5T742 122 aa8.96□□□□□ -0.98
VPS11-205ENST00000534551 OR10D4PQ8NGN7 298 aa8.96□□□□□ -0.98
VPS11-205ENST00000534551 CIRBP-AS1Q8TBR5 109 aa8.96□□□□□ -0.98
VPS11-205ENST00000534551 CAMK2N2Q96S95 79 aa8.96□□□□□ -0.98
VPS11-205ENST00000534551 GEMIN7Q9H840 131 aaKnown RBP8.96□□□□□ -0.98
VPS11-205ENST00000534551 A0A096LNI7 61 aa8.95□□□□□ -0.98
VPS11-205ENST00000534551 IGKV2-24A0A0C4DH68 120 aa8.95□□□□□ -0.98
VPS11-205ENST00000534551 LINC01549A6NIU2 74 aa8.95□□□□□ -0.98
VPS11-205ENST00000534551 HERVK_113P63121 156 aa8.95□□□□□ -0.98
VPS11-205ENST00000534551 KIAA0087Q14695 138 aa8.95□□□□□ -0.98
VPS11-205ENST00000534551 LINC00469Q8N7U9 141 aa8.95□□□□□ -0.98
VPS11-205ENST00000534551 CHAC1Q9BUX1 264 aa8.95□□□□□ -0.98
VPS11-205ENST00000534551 C2orf82Q6UX34 121 aa8.94□□□□□ -0.98
VPS11-205ENST00000534551 Q8N1X5 172 aa8.94□□□□□ -0.98
VPS11-205ENST00000534551 VPS13BQ7Z7G8 4022 aa8.94□□□□□ -0.98
VPS11-205ENST00000534551 PCLOQ9Y6V0 5065 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 TINCRA0A1B0GVN0 87 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BKO60814 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 ATP5LO75964 103 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BJP06899 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 SPINK8P0C7L1 97 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BOP23527 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BBP33778 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BDP58876 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BCP62807 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST2H2BEQ16778 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.93□□□□□ -0.98
VPS11-205ENST00000534551 Q5VSD8 79 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 SPACA4Q8TDM5 124 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BHQ93079 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 C2orf48Q96LS8 159 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BNQ99877 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BMQ99879 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 TOMM7Q9P0U1 55 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 IGLV5-45A0A087WSX0 123 aa8.92□□□□□ -0.98
VPS11-205ENST00000534551 SMIM1B2RUZ4 78 aa8.92□□□□□ -0.98
VPS11-205ENST00000534551 IGLC3P0DOY3 106 aa8.92□□□□□ -0.98
VPS11-205ENST00000534551 UNQ6190/PRO20217Q6UXQ8 127 aa8.92□□□□□ -0.98
VPS11-205ENST00000534551 IFI27L1Q96BM0 104 aa8.92□□□□□ -0.98
VPS11-205ENST00000534551 PACRGQ96M98 296 aaPredicted RBP8.92□□□□□ -0.98
VPS11-205ENST00000534551 C6orf48Q9UBA6 75 aa8.92□□□□□ -0.98
VPS11-205ENST00000534551 C11orf86A6NJI1 115 aa8.91□□□□□ -0.98
VPS11-205ENST00000534551 NDUFA1O15239 70 aa8.91□□□□□ -0.98
VPS11-205ENST00000534551 ZNF22P17026 224 aaPredicted RBP8.91□□□□□ -0.98
VPS11-205ENST00000534551 SEC11AP67812 179 aa8.91□□□□□ -0.98
VPS11-205ENST00000534551 CIRBPQ14011 172 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms