RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 FA2HQ7L5A8 372 aa8.62□□□□□ -1.03
CAPN1-227ENST00000533909 LINC00528Q8N1L1 170 aa8.62□□□□□ -1.03
CAPN1-227ENST00000533909 CIRBP-AS1Q8TBR5 109 aa8.62□□□□□ -1.03
CAPN1-227ENST00000533909 LINC00526Q96FQ7 95 aa8.62□□□□□ -1.03
CAPN1-227ENST00000533909 CARD19Q96LW7 228 aa8.62□□□□□ -1.03
CAPN1-227ENST00000533909 ALKBH7Q9BT30 221 aaPredicted RBP8.62□□□□□ -1.03
CAPN1-227ENST00000533909 KRTAP17-1Q9BYP8 105 aa8.62□□□□□ -1.03
CAPN1-227ENST00000533909 TRAPPC1Q9Y5R8 145 aa8.62□□□□□ -1.03
CAPN1-227ENST00000533909 SRRM2Q9UQ35 2752 aaKnown RBP8.61□□□□□ -1.03
CAPN1-227ENST00000533909 PLA2G1BP04054 148 aaKnown RBP8.61□□□□□ -1.03
CAPN1-227ENST00000533909 ABCA13Q86UQ4 5058 aa8.61□□□□□ -1.03
CAPN1-227ENST00000533909 INAFM2P0DMQ5 153 aa8.6□□□□□ -1.03
CAPN1-227ENST00000533909 SYCNQ0VAF6 134 aa8.6□□□□□ -1.03
CAPN1-227ENST00000533909 CAMK2N2Q96S95 79 aa8.6□□□□□ -1.03
CAPN1-227ENST00000533909 NPSP0C0P6 89 aa8.59□□□□□ -1.03
CAPN1-227ENST00000533909 COX6A2Q02221 97 aa8.59□□□□□ -1.03
CAPN1-227ENST00000533909 SPAG11BQ08648 103 aa8.59□□□□□ -1.03
CAPN1-227ENST00000533909 ORAOV1Q8WV07 137 aa8.59□□□□□ -1.03
CAPN1-227ENST00000533909 FAM104AQ969W3 186 aa8.59□□□□□ -1.03
CAPN1-227ENST00000533909 SCGB3A1Q96QR1 104 aa8.59□□□□□ -1.03
CAPN1-227ENST00000533909 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.59□□□□□ -1.03
CAPN1-227ENST00000533909 IGLV4-69A0A075B6H9 119 aa8.58□□□□□ -1.04
CAPN1-227ENST00000533909 IGKV2-24A0A0C4DH68 120 aa8.58□□□□□ -1.04
CAPN1-227ENST00000533909 LINC01549A6NIU2 74 aa8.58□□□□□ -1.04
CAPN1-227ENST00000533909 OR10D4PQ8NGN7 298 aa8.58□□□□□ -1.04
CAPN1-227ENST00000533909 TOMM6Q96B49 74 aa8.58□□□□□ -1.04
CAPN1-227ENST00000533909 IGHV3OR16-9A0A0B4J2B5 98 aa8.57□□□□□ -1.04
CAPN1-227ENST00000533909 IGIPA6NJ69 53 aa8.57□□□□□ -1.04
CAPN1-227ENST00000533909 CHTF8P0CG12 524 aa8.57□□□□□ -1.04
CAPN1-227ENST00000533909 MAJINQ3KP22 176 aa8.57□□□□□ -1.04
CAPN1-227ENST00000533909 C2orf48Q96LS8 159 aa8.57□□□□□ -1.04
CAPN1-227ENST00000533909 TIMM17AQ99595 171 aa8.57□□□□□ -1.04
CAPN1-227ENST00000533909 UBE2D1P51668 147 aa8.56□□□□□ -1.04
CAPN1-227ENST00000533909 SEC11AP67812 179 aa8.56□□□□□ -1.04
CAPN1-227ENST00000533909 LINC00242Q5T6M2 205 aa8.56□□□□□ -1.04
CAPN1-227ENST00000533909 ERASQ7Z444 233 aa8.56□□□□□ -1.04
CAPN1-227ENST00000533909 SLC7A5P1Q8MH63 180 aa8.56□□□□□ -1.04
CAPN1-227ENST00000533909 LINC00474Q9P2X8 69 aa8.56□□□□□ -1.04
CAPN1-227ENST00000533909 PANO1I0J062 215 aa8.55□□□□□ -1.04
CAPN1-227ENST00000533909 RAB5BP61020 215 aa8.55□□□□□ -1.04
CAPN1-227ENST00000533909 ZC2HC1BQ5TFG8 222 aa8.55□□□□□ -1.04
CAPN1-227ENST00000533909 SPACA4Q8TDM5 124 aa8.55□□□□□ -1.04
CAPN1-227ENST00000533909 AMELXQ99217 191 aa8.55□□□□□ -1.04
CAPN1-227ENST00000533909 GEMIN7Q9H840 131 aaKnown RBP8.55□□□□□ -1.04
CAPN1-227ENST00000533909 DNAH8Q96JB1 4490 aa8.55□□□□□ -1.04
CAPN1-227ENST00000533909 A0A087WZ39 114 aa8.54□□□□□ -1.04
CAPN1-227ENST00000533909 LOC107984640A0A0U1RRK4 108 aa8.54□□□□□ -1.04
CAPN1-227ENST00000533909 LINC01546A6NGU7 62 aa8.54□□□□□ -1.04
CAPN1-227ENST00000533909 NDUFA1O15239 70 aa8.54□□□□□ -1.04
CAPN1-227ENST00000533909 Q6ZRU5 148 aa8.54□□□□□ -1.04
CAPN1-227ENST00000533909 LINC00173Q6ZV60 143 aa8.54□□□□□ -1.04
CAPN1-227ENST00000533909 A0A087WYN8 130 aa8.53□□□□□ -1.04
CAPN1-227ENST00000533909 A0A096LNI7 61 aa8.53□□□□□ -1.04
CAPN1-227ENST00000533909 F8WDY8 70 aa8.53□□□□□ -1.04
CAPN1-227ENST00000533909 PRSS2P07478 247 aa8.53□□□□□ -1.04
CAPN1-227ENST00000533909 HERVK_113P63121 156 aa8.53□□□□□ -1.04
CAPN1-227ENST00000533909 CIRBPQ14011 172 aaKnown RBP8.53□□□□□ -1.04
CAPN1-227ENST00000533909 CBLN2Q8IUK8 224 aa8.53□□□□□ -1.04
CAPN1-227ENST00000533909 C18orf32Q8TCD1 76 aa8.53□□□□□ -1.04
CAPN1-227ENST00000533909 PACRGQ96M98 296 aaPredicted RBP8.53□□□□□ -1.04
CAPN1-227ENST00000533909 FAT1Q14517 4588 aa8.53□□□□□ -1.04
CAPN1-227ENST00000533909 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.52□□□□□ -1.05
CAPN1-227ENST00000533909 LINC00614P0C842 121 aa8.52□□□□□ -1.05
CAPN1-227ENST00000533909 RPL37AP61513 92 aaKnown RBP8.52□□□□□ -1.05
CAPN1-227ENST00000533909 RPL18AQ02543 176 aaKnown RBP8.52□□□□□ -1.05
CAPN1-227ENST00000533909 GAGE2BQ13066 116 aa8.52□□□□□ -1.05
CAPN1-227ENST00000533909 STPG4Q8N801 248 aa8.52□□□□□ -1.05
CAPN1-227ENST00000533909 NDUFA6P56556 154 aa8.51□□□□□ -1.05
CAPN1-227ENST00000533909 LINC01561Q8N1V8 128 aa8.51□□□□□ -1.05
CAPN1-227ENST00000533909 C7orf33Q8WU49 177 aa8.51□□□□□ -1.05
CAPN1-227ENST00000533909 TOMM7Q9P0U1 55 aa8.51□□□□□ -1.05
CAPN1-227ENST00000533909 FLG2Q5D862 2391 aaPredicted RBP8.51□□□□□ -1.05
CAPN1-227ENST00000533909 HBDP02042 147 aa8.5□□□□□ -1.05
CAPN1-227ENST00000533909 CKS1BP61024 79 aa8.5□□□□□ -1.05
CAPN1-227ENST00000533909 RNF151Q2KHN1 245 aa8.5□□□□□ -1.05
CAPN1-227ENST00000533909 LINC00469Q8N7U9 141 aa8.5□□□□□ -1.05
CAPN1-227ENST00000533909 MRPL35Q9NZE8 188 aaKnown RBP8.5□□□□□ -1.05
CAPN1-227ENST00000533909 PLAC8Q9NZF1 115 aa8.5□□□□□ -1.05
CAPN1-227ENST00000533909 DMBT1Q9UGM3 2413 aaPredicted RBP8.5□□□□□ -1.05
CAPN1-227ENST00000533909 A0A0J9YXV3 536 aa8.49□□□□□ -1.05
CAPN1-227ENST00000533909 PTTG1IPP53801 180 aa8.49□□□□□ -1.05
CAPN1-227ENST00000533909 PMVKQ15126 192 aa8.49□□□□□ -1.05
CAPN1-227ENST00000533909 FAM19A3Q7Z5A8 133 aa8.49□□□□□ -1.05
CAPN1-227ENST00000533909 YPEL4Q96NS1 127 aa8.49□□□□□ -1.05
CAPN1-227ENST00000533909 CST9LQ9H4G1 147 aa8.49□□□□□ -1.05
CAPN1-227ENST00000533909 VPS13BQ7Z7G8 4022 aa8.49□□□□□ -1.05
CAPN1-227ENST00000533909 PMCHL1Q16048 86 aa8.48□□□□□ -1.05
CAPN1-227ENST00000533909 C6orf226Q5I0X4 101 aa8.48□□□□□ -1.05
CAPN1-227ENST00000533909 UNQ6190/PRO20217Q6UXQ8 127 aa8.48□□□□□ -1.05
CAPN1-227ENST00000533909 CDKN2A-AS1Q9UH64 79 aa8.48□□□□□ -1.05
CAPN1-227ENST00000533909 TINCRA0A1B0GVN0 87 aa8.47□□□□□ -1.05
CAPN1-227ENST00000533909 ATP5LO75964 103 aa8.47□□□□□ -1.05
CAPN1-227ENST00000533909 BAGE3Q86Y29 109 aa8.47□□□□□ -1.05
CAPN1-227ENST00000533909 TRBV30A0A0K0K1B3 111 aa8.46□□□□□ -1.06
CAPN1-227ENST00000533909 H3BRM9 83 aa8.46□□□□□ -1.06
CAPN1-227ENST00000533909 C10orf25Q5T742 122 aa8.46□□□□□ -1.06
CAPN1-227ENST00000533909 CHCHD1Q96BP2 118 aaKnown RBP8.46□□□□□ -1.06
CAPN1-227ENST00000533909 URB1-AS1Q96HZ7 61 aa8.46□□□□□ -1.06
CAPN1-227ENST00000533909 KIAA0087Q14695 138 aa8.45□□□□□ -1.06
CAPN1-227ENST00000533909 C2orf82Q6UX34 121 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms