RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 TMEM18Q96B42 140 aa10.88□□□□□ -0.67
UBXN1-216ENST00000533908 C20orf78Q9BR46 151 aa10.88□□□□□ -0.67
UBXN1-216ENST00000533908 C6orf48Q9UBA6 75 aa10.88□□□□□ -0.67
UBXN1-216ENST00000533908 NAT8BQ9UHF3 227 aa10.88□□□□□ -0.67
UBXN1-216ENST00000533908 KRTAP1-4P0C5Y4 121 aa10.87□□□□□ -0.67
UBXN1-216ENST00000533908 TLX1NBP0CAT3 122 aa10.87□□□□□ -0.67
UBXN1-216ENST00000533908 RPL23P62829 140 aaKnown RBP10.87□□□□□ -0.67
UBXN1-216ENST00000533908 RPL32P62910 135 aaKnown RBP10.87□□□□□ -0.67
UBXN1-216ENST00000533908 IMMP2LQ96T52 175 aa10.87□□□□□ -0.67
UBXN1-216ENST00000533908 NDUFA1O15239 70 aa10.86□□□□□ -0.67
UBXN1-216ENST00000533908 TNFRSF6BO95407 300 aa10.86□□□□□ -0.67
UBXN1-216ENST00000533908 KIAA0087Q14695 138 aa10.86□□□□□ -0.67
UBXN1-216ENST00000533908 TMEM241Q24JQ0 296 aa10.86□□□□□ -0.67
UBXN1-216ENST00000533908 FAM74A3Q4VXF1 159 aa10.86□□□□□ -0.67
UBXN1-216ENST00000533908 FAM19A5Q7Z5A7 132 aaPredicted RBP10.86□□□□□ -0.67
UBXN1-216ENST00000533908 SMIM27A0A1W2PRY6 76 aa10.85□□□□□ -0.67
UBXN1-216ENST00000533908 LINC00862A6NCI5 91 aa10.85□□□□□ -0.67
UBXN1-216ENST00000533908 C9JQL5 133 aa10.85□□□□□ -0.67
UBXN1-216ENST00000533908 F8WDY8 70 aa10.85□□□□□ -0.67
UBXN1-216ENST00000533908 CKS2P33552 79 aa10.85□□□□□ -0.67
UBXN1-216ENST00000533908 MRPS36P82909 103 aaKnown RBP10.85□□□□□ -0.67
UBXN1-216ENST00000533908 GAGE2EQ4V326 116 aa10.85□□□□□ -0.67
UBXN1-216ENST00000533908 GAGE2DQ9UEU5 116 aa10.85□□□□□ -0.67
UBXN1-216ENST00000533908 TCAPO15273 167 aa10.84□□□□□ -0.67
UBXN1-216ENST00000533908 SMIM2Q9BVW6 85 aa10.84□□□□□ -0.67
UBXN1-216ENST00000533908 SMDT1Q9H4I9 107 aa10.84□□□□□ -0.67
UBXN1-216ENST00000533908 SPANXA1Q9NS26 97 aa10.84□□□□□ -0.67
UBXN1-216ENST00000533908 NPYP01303 97 aa10.83□□□□□ -0.68
UBXN1-216ENST00000533908 IFITM10A6NMD0 228 aa10.82□□□□□ -0.68
UBXN1-216ENST00000533908 AKAP14Q86UN6 197 aa10.82□□□□□ -0.68
UBXN1-216ENST00000533908 IGLV1-50A0A075B6I6 118 aa10.81□□□□□ -0.68
UBXN1-216ENST00000533908 D6R8Y8 96 aa10.81□□□□□ -0.68
UBXN1-216ENST00000533908 HBBP68871 147 aa10.81□□□□□ -0.68
UBXN1-216ENST00000533908 ADIRFQ15847 76 aa10.81□□□□□ -0.68
UBXN1-216ENST00000533908 C2orf82Q6UX34 121 aa10.81□□□□□ -0.68
UBXN1-216ENST00000533908 LINC00242Q5T6M2 205 aa10.8□□□□□ -0.68
UBXN1-216ENST00000533908 M0QXV9 152 aa10.79□□□□□ -0.68
UBXN1-216ENST00000533908 SRSF3P84103 164 aaKnown RBP10.79□□□□□ -0.68
UBXN1-216ENST00000533908 C9orf129Q5T035 196 aaKnown RBP10.79□□□□□ -0.68
UBXN1-216ENST00000533908 MRPL54Q6P161 138 aaKnown RBP10.79□□□□□ -0.68
UBXN1-216ENST00000533908 hCG_2014768A0A024R1R8 64 aa10.78□□□□□ -0.68
UBXN1-216ENST00000533908 A0A1B0GW15 77 aa10.78□□□□□ -0.68
UBXN1-216ENST00000533908 A0A1B0GXF2 115 aa10.78□□□□□ -0.68
UBXN1-216ENST00000533908 NAT8Q9UHE5 227 aa10.78□□□□□ -0.68
UBXN1-216ENST00000533908 MUC2Q02817 5179 aa10.76□□□□□ -0.69
UBXN1-216ENST00000533908 IGLV4-3A0A075B6K6 122 aa10.76□□□□□ -0.69
UBXN1-216ENST00000533908 TGIF2-C20orf24A0A0A6YYL0 155 aa10.76□□□□□ -0.69
UBXN1-216ENST00000533908 UBE2BP63146 152 aa10.76□□□□□ -0.69
UBXN1-216ENST00000533908 PRR4Q16378 134 aa10.76□□□□□ -0.69
UBXN1-216ENST00000533908 NDUFC2-KCTD14E9PQ53 114 aa10.75□□□□□ -0.69
UBXN1-216ENST00000533908 ZC2HC1BQ5TFG8 222 aa10.75□□□□□ -0.69
UBXN1-216ENST00000533908 PYGO1Q9Y3Y4 419 aa10.75□□□□□ -0.69
UBXN1-216ENST00000533908 TRBV30A0A0K0K1B3 111 aa10.74□□□□□ -0.69
UBXN1-216ENST00000533908 F8W036 122 aa10.73□□□□□ -0.69
UBXN1-216ENST00000533908 PPBPP02775 128 aa10.73□□□□□ -0.69
UBXN1-216ENST00000533908 IFI27P40305 119 aaPredicted RBP10.73□□□□□ -0.69
UBXN1-216ENST00000533908 UBE2D1P51668 147 aa10.73□□□□□ -0.69
UBXN1-216ENST00000533908 TMEM136Q6ZRR5 245 aa10.72□□□□□ -0.69
UBXN1-216ENST00000533908 S100A8P05109 93 aa10.71□□□□□ -0.69
UBXN1-216ENST00000533908 RAB5AP20339 215 aa10.71□□□□□ -0.69
UBXN1-216ENST00000533908 LINC00173Q6ZV60 143 aa10.71□□□□□ -0.69
UBXN1-216ENST00000533908 ORMDL3Q8N138 153 aa10.71□□□□□ -0.69
UBXN1-216ENST00000533908 TMEM141Q96I45 108 aa10.71□□□□□ -0.69
UBXN1-216ENST00000533908 PRELID3AQ96N28 172 aa10.71□□□□□ -0.69
UBXN1-216ENST00000533908 ZNF861PO60384 105 aa10.7□□□□□ -0.7
UBXN1-216ENST00000533908 RPL13AP40429 203 aaKnown RBP10.7□□□□□ -0.7
UBXN1-216ENST00000533908 LINC00469Q8N7U9 141 aa10.7□□□□□ -0.7
UBXN1-216ENST00000533908 PACRGQ96M98 296 aaPredicted RBP10.7□□□□□ -0.7
UBXN1-216ENST00000533908 LOC389332A0A1B0GUA5 103 aa10.69□□□□□ -0.7
UBXN1-216ENST00000533908 PRSS47A8MTI9 375 aa10.69□□□□□ -0.7
UBXN1-216ENST00000533908 LINC01561Q8N1V8 128 aa10.69□□□□□ -0.7
UBXN1-216ENST00000533908 CARHSP1Q9Y2V2 147 aaKnown RBP10.69□□□□□ -0.7
UBXN1-216ENST00000533908 C22orf24Q9Y442 160 aa10.69□□□□□ -0.7
UBXN1-216ENST00000533908 PEA15Q15121 130 aa10.68□□□□□ -0.7
UBXN1-216ENST00000533908 TEX43Q6ZNM6 134 aa10.68□□□□□ -0.7
UBXN1-216ENST00000533908 TSPAN13O95857 204 aa10.67□□□□□ -0.7
UBXN1-216ENST00000533908 AMELXQ99217 191 aa10.67□□□□□ -0.7
UBXN1-216ENST00000533908 XAGE1AQ9HD64 81 aa10.67□□□□□ -0.7
UBXN1-216ENST00000533908 TOMM7Q9P0U1 55 aa10.66□□□□□ -0.7
UBXN1-216ENST00000533908 A0A087X002 238 aa10.65□□□□□ -0.7
UBXN1-216ENST00000533908 C2orf66Q6UXQ4 117 aa10.65□□□□□ -0.7
UBXN1-216ENST00000533908 CTDSP1Q9GZU7 261 aa10.65□□□□□ -0.7
UBXN1-216ENST00000533908 C6orf226Q5I0X4 101 aa10.64□□□□□ -0.71
UBXN1-216ENST00000533908 Q6ZN92 141 aa10.64□□□□□ -0.71
UBXN1-216ENST00000533908 ATP5L2Q7Z4Y8 100 aa10.64□□□□□ -0.71
UBXN1-216ENST00000533908 VCX2Q9H322 139 aa10.64□□□□□ -0.71
UBXN1-216ENST00000533908 IGIPA6NJ69 53 aa10.63□□□□□ -0.71
UBXN1-216ENST00000533908 PRSS2P07478 247 aa10.63□□□□□ -0.71
UBXN1-216ENST00000533908 CKS1BP61024 79 aa10.63□□□□□ -0.71
UBXN1-216ENST00000533908 Q8N8P6 123 aa10.63□□□□□ -0.71
UBXN1-216ENST00000533908 C2orf88Q9BSF0 95 aa10.63□□□□□ -0.71
UBXN1-216ENST00000533908 CYSLTR1Q9Y271 337 aa10.63□□□□□ -0.71
UBXN1-216ENST00000533908 NUPR1O60356 82 aa10.62□□□□□ -0.71
UBXN1-216ENST00000533908 FAM19A3Q7Z5A8 133 aa10.62□□□□□ -0.71
UBXN1-216ENST00000533908 Q8IZM0 81 aa10.62□□□□□ -0.71
UBXN1-216ENST00000533908 ALKBH7Q9BT30 221 aaPredicted RBP10.62□□□□□ -0.71
UBXN1-216ENST00000533908 MAP1LC3AQ9H492 121 aa10.62□□□□□ -0.71
UBXN1-216ENST00000533908 CDKN2A-AS1Q9UH64 79 aa10.62□□□□□ -0.71
UBXN1-216ENST00000533908 A0A1B0GVG6 124 aa10.6□□□□□ -0.71
UBXN1-216ENST00000533908 LBHQ53QV2 105 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms