RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 RPS10P5Q9NQ39 176 aa5.09□□□□□ -1.59
CASP4-212ENST00000533730 KLK12Q9UKR0 248 aa5.09□□□□□ -1.59
CASP4-212ENST00000533730 LAMTOR2Q9Y2Q5 125 aa5.09□□□□□ -1.59
CASP4-212ENST00000533730 RYR2Q92736 4967 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 SACSQ9NZJ4 4579 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 IGKV2D-30A0A075B6S6 120 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 A0A1B0GVY2 172 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 D6R8Y8 96 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 SMKR1H3BMG3 65 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 GAS8-AS1O95177 125 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 HLA-DQA1P01909 254 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 ZNF25P17030 456 aaPredicted RBP5.08□□□□□ -1.6
CASP4-212ENST00000533730 FCER1GP30273 86 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 RBX1P62877 108 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 MIAQ16674 131 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 AMMECR1LQ6DCA0 310 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 TMEM136Q6ZRR5 245 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 UBE2WQ96B02 151 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 DNAH1Q9P2D7 4330 aa5.08□□□□□ -1.6
CASP4-212ENST00000533730 MT-ND6P03923 174 aa5.07□□□□□ -1.6
CASP4-212ENST00000533730 Q8N976 141 aa5.07□□□□□ -1.6
CASP4-212ENST00000533730 PRELID3AQ96N28 172 aa5.07□□□□□ -1.6
CASP4-212ENST00000533730 SMIM2Q9BVW6 85 aa5.07□□□□□ -1.6
CASP4-212ENST00000533730 PRR34Q9NV39 138 aa5.07□□□□□ -1.6
CASP4-212ENST00000533730 VPS13DQ5THJ4 4388 aa5.06□□□□□ -1.6
CASP4-212ENST00000533730 RYR3Q15413 4870 aa5.06□□□□□ -1.6
CASP4-212ENST00000533730 TRAV8-4A0A0B4J246 113 aa5.06□□□□□ -1.6
CASP4-212ENST00000533730 NPYP01303 97 aa5.06□□□□□ -1.6
CASP4-212ENST00000533730 FGF6P10767 208 aa5.06□□□□□ -1.6
CASP4-212ENST00000533730 ESDP10768 282 aa5.06□□□□□ -1.6
CASP4-212ENST00000533730 TMEM101Q96IK0 257 aa5.06□□□□□ -1.6
CASP4-212ENST00000533730 GNB1LQ9BYB4 327 aa5.06□□□□□ -1.6
CASP4-212ENST00000533730 MAP1LC3AQ9H492 121 aa5.06□□□□□ -1.6
CASP4-212ENST00000533730 KMT2AQ03164 3969 aa5.06□□□□□ -1.6
CASP4-212ENST00000533730 IGKV2D-24A0A075B6R9 120 aa5.05□□□□□ -1.6
CASP4-212ENST00000533730 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.05□□□□□ -1.6
CASP4-212ENST00000533730 A0A087WTM6 91 aa5.05□□□□□ -1.6
CASP4-212ENST00000533730 IGKV2-29A2NJV5 120 aaPredicted RBP5.05□□□□□ -1.6
CASP4-212ENST00000533730 K7EMI3 77 aa5.05□□□□□ -1.6
CASP4-212ENST00000533730 RAB5AP20339 215 aa5.05□□□□□ -1.6
CASP4-212ENST00000533730 REG3AQ06141 175 aa5.05□□□□□ -1.6
CASP4-212ENST00000533730 ENHOQ6UWT2 76 aa5.05□□□□□ -1.6
CASP4-212ENST00000533730 MRPL52Q86TS9 123 aaKnown RBP5.05□□□□□ -1.6
CASP4-212ENST00000533730 LINC00269Q8N2A0 174 aa5.05□□□□□ -1.6
CASP4-212ENST00000533730 C20orf203Q8NBC4 194 aa5.05□□□□□ -1.6
CASP4-212ENST00000533730 OR5A1Q8NGJ0 315 aa5.05□□□□□ -1.6
CASP4-212ENST00000533730 DEFB104AQ8WTQ1 72 aa5.05□□□□□ -1.6
CASP4-212ENST00000533730 IGLV4-60A0A075B6I1 120 aa5.04□□□□□ -1.6
CASP4-212ENST00000533730 C14orf177Q52M58 125 aa5.04□□□□□ -1.6
CASP4-212ENST00000533730 TIMM21Q9BVV7 248 aa5.04□□□□□ -1.6
CASP4-212ENST00000533730 NXT2Q9NPJ8 142 aaKnown RBP5.04□□□□□ -1.6
CASP4-212ENST00000533730 DNAH6Q9C0G6 4158 aa5.03□□□□□ -1.6
CASP4-212ENST00000533730 LRCOL1A6NCL2 159 aa5.03□□□□□ -1.6
CASP4-212ENST00000533730 G0S2P27469 103 aa5.03□□□□□ -1.6
CASP4-212ENST00000533730 CLPSL2Q6UWE3 100 aa5.03□□□□□ -1.6
CASP4-212ENST00000533730 SPATA12Q7Z6I5 190 aa5.03□□□□□ -1.6
CASP4-212ENST00000533730 SLC7A5P1Q8MH63 180 aa5.03□□□□□ -1.6
CASP4-212ENST00000533730 Q8N8P6 123 aa5.03□□□□□ -1.6
CASP4-212ENST00000533730 SPANXA1Q9NS26 97 aa5.03□□□□□ -1.6
CASP4-212ENST00000533730 DHRS4-AS1Q9P1J3 65 aa5.03□□□□□ -1.6
CASP4-212ENST00000533730 HYDINQ4G0P3 5121 aa5.03□□□□□ -1.6
CASP4-212ENST00000533730 C16orf90A8MZG2 172 aa5.02□□□□□ -1.61
CASP4-212ENST00000533730 CCL25O15444 150 aa5.02□□□□□ -1.61
CASP4-212ENST00000533730 CFC1BP0CG36 223 aa5.02□□□□□ -1.61
CASP4-212ENST00000533730 CFC1P0CG37 223 aa5.02□□□□□ -1.61
CASP4-212ENST00000533730 FABP9Q0Z7S8 132 aa5.02□□□□□ -1.61
CASP4-212ENST00000533730 ORMDL2Q53FV1 153 aa5.02□□□□□ -1.61
CASP4-212ENST00000533730 ZNF664Q8N3J9 261 aa5.02□□□□□ -1.61
CASP4-212ENST00000533730 Q8N814 137 aa5.02□□□□□ -1.61
CASP4-212ENST00000533730 SMCO4Q9NRQ5 59 aa5.02□□□□□ -1.61
CASP4-212ENST00000533730 UBE2D4Q9Y2X8 147 aa5.02□□□□□ -1.61
CASP4-212ENST00000533730 TGIF2-C20orf24A0A0A6YYL0 155 aa5.01□□□□□ -1.61
CASP4-212ENST00000533730 LOC389332A0A1B0GUA5 103 aa5.01□□□□□ -1.61
CASP4-212ENST00000533730 LINC01549A6NIU2 74 aa5.01□□□□□ -1.61
CASP4-212ENST00000533730 EPM2AB3EWF7 344 aa5.01□□□□□ -1.61
CASP4-212ENST00000533730 HSBP1L1C9JCN9 74 aa5.01□□□□□ -1.61
CASP4-212ENST00000533730 SS18Q15532 418 aa5.01□□□□□ -1.61
CASP4-212ENST00000533730 BAALCQ8WXS3 180 aa5.01□□□□□ -1.61
CASP4-212ENST00000533730 KRTAP9-8Q9BYQ0 159 aa5.01□□□□□ -1.61
CASP4-212ENST00000533730 CDC42SE2Q9NRR3 84 aa5.01□□□□□ -1.61
CASP4-212ENST00000533730 TRAPPC1Q9Y5R8 145 aa5.01□□□□□ -1.61
CASP4-212ENST00000533730 IGLV10-54A0A075B6I4 117 aa5□□□□□ -1.61
CASP4-212ENST00000533730 IGKV3OR2-268A0A0C4DH90 116 aa5□□□□□ -1.61
CASP4-212ENST00000533730 IFI27P40305 119 aaPredicted RBP5□□□□□ -1.61
CASP4-212ENST00000533730 MRPS36P82909 103 aaKnown RBP5□□□□□ -1.61
CASP4-212ENST00000533730 KRTAP26-1Q6PEX3 210 aa5□□□□□ -1.61
CASP4-212ENST00000533730 CHCHD10Q8WYQ3 142 aaPredicted RBP5□□□□□ -1.61
CASP4-212ENST00000533730 CYSLTR1Q9Y271 337 aa5□□□□□ -1.61
CASP4-212ENST00000533730 LINC00959A0A1B0GUT2 108 aa4.99□□□□□ -1.61
CASP4-212ENST00000533730 IFITM10A6NMD0 228 aa4.99□□□□□ -1.61
CASP4-212ENST00000533730 C1orf196B1AJZ1 125 aa4.99□□□□□ -1.61
CASP4-212ENST00000533730 LECT2O14960 151 aa4.99□□□□□ -1.61
CASP4-212ENST00000533730 RPL39P62891 51 aaKnown RBP4.99□□□□□ -1.61
CASP4-212ENST00000533730 Q6ZN92 141 aa4.99□□□□□ -1.61
CASP4-212ENST00000533730 WFDC2Q14508 124 aa4.98□□□□□ -1.61
CASP4-212ENST00000533730 C2orf66Q6UXQ4 117 aa4.98□□□□□ -1.61
CASP4-212ENST00000533730 Q6ZUT4 128 aa4.98□□□□□ -1.61
CASP4-212ENST00000533730 FA2HQ7L5A8 372 aa4.98□□□□□ -1.61
CASP4-212ENST00000533730 CBLN2Q8IUK8 224 aa4.98□□□□□ -1.61
CASP4-212ENST00000533730 YPEL4Q96NS1 127 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms