RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 LINC00242Q5T6M2 205 aa11.53□□□□□ -0.56
NXF1-216ENST00000533499 GEMIN7Q9H840 131 aaKnown RBP11.53□□□□□ -0.56
NXF1-216ENST00000533499 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.52□□□□□ -0.57
NXF1-216ENST00000533499 S100A6P06703 90 aa11.52□□□□□ -0.57
NXF1-216ENST00000533499 FUSP35637 526 aaKnown RBP eCLIP11.52□□□□□ -0.57
NXF1-216ENST00000533499 HSPB8Q9UJY1 196 aa11.52□□□□□ -0.57
NXF1-216ENST00000533499 COX6A2Q02221 97 aa11.51□□□□□ -0.57
NXF1-216ENST00000533499 CFAP161Q6P656 301 aa11.51□□□□□ -0.57
NXF1-216ENST00000533499 SPATA12Q7Z6I5 190 aa11.51□□□□□ -0.57
NXF1-216ENST00000533499 hDV102S1A0JD36 115 aa11.5□□□□□ -0.57
NXF1-216ENST00000533499 HIGD2BQ4VC39 106 aa11.5□□□□□ -0.57
NXF1-216ENST00000533499 C14orf177Q52M58 125 aa11.5□□□□□ -0.57
NXF1-216ENST00000533499 Q8N814 137 aa11.5□□□□□ -0.57
NXF1-216ENST00000533499 SEC11AP67812 179 aa11.49□□□□□ -0.57
NXF1-216ENST00000533499 COA6Q5JTJ3 125 aaKnown RBP11.49□□□□□ -0.57
NXF1-216ENST00000533499 LINC00469Q8N7U9 141 aa11.49□□□□□ -0.57
NXF1-216ENST00000533499 CHTOPQ9Y3Y2 248 aaKnown RBP11.49□□□□□ -0.57
NXF1-216ENST00000533499 IGHV1-58A0A0C4DH39 117 aa11.48□□□□□ -0.57
NXF1-216ENST00000533499 HERVK_113P63121 156 aa11.48□□□□□ -0.57
NXF1-216ENST00000533499 IGHV3OR16-9A0A0B4J2B5 98 aa11.47□□□□□ -0.57
NXF1-216ENST00000533499 APOMO95445 188 aa11.47□□□□□ -0.57
NXF1-216ENST00000533499 C15orf56Q8N910 161 aa11.47□□□□□ -0.57
NXF1-216ENST00000533499 CHAC1Q9BUX1 264 aa11.47□□□□□ -0.57
NXF1-216ENST00000533499 MAP1LC3CQ9BXW4 147 aa11.47□□□□□ -0.57
NXF1-216ENST00000533499 TINCRA0A1B0GVN0 87 aa11.46□□□□□ -0.57
NXF1-216ENST00000533499 A0A1B0GVY2 172 aa11.46□□□□□ -0.57
NXF1-216ENST00000533499 S100A2P29034 98 aa11.46□□□□□ -0.57
NXF1-216ENST00000533499 KRTAP10-2P60368 255 aa11.46□□□□□ -0.57
NXF1-216ENST00000533499 ORAOV1Q8WV07 137 aa11.46□□□□□ -0.57
NXF1-216ENST00000533499 LINC00526Q96FQ7 95 aa11.46□□□□□ -0.57
NXF1-216ENST00000533499 PACRGQ96M98 296 aaPredicted RBP11.46□□□□□ -0.57
NXF1-216ENST00000533499 CDKN2A-AS1Q9UH64 79 aa11.46□□□□□ -0.57
NXF1-216ENST00000533499 IGLV5-52A0A0A0MRZ9 124 aa11.45□□□□□ -0.58
NXF1-216ENST00000533499 ZNF561-AS1K7EIQ3 104 aa11.45□□□□□ -0.58
NXF1-216ENST00000533499 FAT2Q9NYQ8 4349 aa11.44□□□□□ -0.58
NXF1-216ENST00000533499 TRAV12-1A0A0B4J245 112 aa11.44□□□□□ -0.58
NXF1-216ENST00000533499 FAM19A3Q7Z5A8 133 aa11.44□□□□□ -0.58
NXF1-216ENST00000533499 A0A087WZ39 114 aa11.43□□□□□ -0.58
NXF1-216ENST00000533499 IGLC3P0DOY3 106 aa11.43□□□□□ -0.58
NXF1-216ENST00000533499 SNRPEP62304 92 aaKnown RBP11.43□□□□□ -0.58
NXF1-216ENST00000533499 MRPL35Q9NZE8 188 aaKnown RBP11.43□□□□□ -0.58
NXF1-216ENST00000533499 TOMM7Q9P0U1 55 aa11.43□□□□□ -0.58
NXF1-216ENST00000533499 TMA7Q9Y2S6 64 aaKnown RBP11.43□□□□□ -0.58
NXF1-216ENST00000533499 IGLV4-69A0A075B6H9 119 aa11.42□□□□□ -0.58
NXF1-216ENST00000533499 C11orf86A6NJI1 115 aa11.42□□□□□ -0.58
NXF1-216ENST00000533499 H3BRM9 83 aa11.42□□□□□ -0.58
NXF1-216ENST00000533499 KRTDAPP60985 99 aa11.42□□□□□ -0.58
NXF1-216ENST00000533499 SPAG11BQ08648 103 aa11.42□□□□□ -0.58
NXF1-216ENST00000533499 TMEM170BQ5T4T1 132 aa11.42□□□□□ -0.58
NXF1-216ENST00000533499 PMCHL2Q9BQD1 86 aa11.42□□□□□ -0.58
NXF1-216ENST00000533499 PGPEP1Q9NXJ5 209 aa11.42□□□□□ -0.58
NXF1-216ENST00000533499 IGHV3-64A0A075B6Q5 118 aa11.41□□□□□ -0.58
NXF1-216ENST00000533499 GVQW2A0A096LPI5 108 aaPredicted RBP11.41□□□□□ -0.58
NXF1-216ENST00000533499 C16orf90A8MZG2 172 aa11.41□□□□□ -0.58
NXF1-216ENST00000533499 F8VRH5 84 aa11.41□□□□□ -0.58
NXF1-216ENST00000533499 SPINK8P0C7L1 97 aa11.41□□□□□ -0.58
NXF1-216ENST00000533499 HIST3H2BBQ8N257 126 aa11.41□□□□□ -0.58
NXF1-216ENST00000533499 NTN5Q8WTR8 489 aaPredicted RBP11.41□□□□□ -0.58
NXF1-216ENST00000533499 PRSS2P07478 247 aa11.4□□□□□ -0.58
NXF1-216ENST00000533499 ODF1Q14990 250 aa11.4□□□□□ -0.58
NXF1-216ENST00000533499 SYS1-DBNDD2H3BUS1 97 aa11.39□□□□□ -0.59
NXF1-216ENST00000533499 ZNF22P17026 224 aaPredicted RBP11.39□□□□□ -0.59
NXF1-216ENST00000533499 LINC01620Q4KN68 170 aa11.39□□□□□ -0.59
NXF1-216ENST00000533499 OR10D4PQ8NGN7 298 aa11.39□□□□□ -0.59
NXF1-216ENST00000533499 DNAH11Q96DT5 4516 aa11.38□□□□□ -0.59
NXF1-216ENST00000533499 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.38□□□□□ -0.59
NXF1-216ENST00000533499 CDPF1Q6NVV7 123 aa11.38□□□□□ -0.59
NXF1-216ENST00000533499 CAMK2N2Q96S95 79 aa11.38□□□□□ -0.59
NXF1-216ENST00000533499 IGLV5-45A0A087WSX0 123 aa11.37□□□□□ -0.59
NXF1-216ENST00000533499 C3orf79P0CE67 100 aa11.37□□□□□ -0.59
NXF1-216ENST00000533499 LINC01561Q8N1V8 128 aa11.37□□□□□ -0.59
NXF1-216ENST00000533499 PKD1P98161 4303 aa11.36□□□□□ -0.59
NXF1-216ENST00000533499 DPM2O94777 84 aa11.36□□□□□ -0.59
NXF1-216ENST00000533499 GCSHP23434 173 aa11.36□□□□□ -0.59
NXF1-216ENST00000533499 SYCNQ0VAF6 134 aa11.36□□□□□ -0.59
NXF1-216ENST00000533499 C6orf226Q5I0X4 101 aa11.36□□□□□ -0.59
NXF1-216ENST00000533499 HIST1H2BLQ99880 126 aa11.36□□□□□ -0.59
NXF1-216ENST00000533499 SMIM1B2RUZ4 78 aa11.35□□□□□ -0.59
NXF1-216ENST00000533499 SLPIP03973 132 aa11.35□□□□□ -0.59
NXF1-216ENST00000533499 PLNP26678 52 aa11.35□□□□□ -0.59
NXF1-216ENST00000533499 PET117Q6UWS5 81 aa11.35□□□□□ -0.59
NXF1-216ENST00000533499 CARD19Q96LW7 228 aa11.35□□□□□ -0.59
NXF1-216ENST00000533499 C5orf52A6NGY3 159 aa11.34□□□□□ -0.59
NXF1-216ENST00000533499 IGKCP01834 107 aa11.34□□□□□ -0.59
NXF1-216ENST00000533499 CKS1BP61024 79 aa11.34□□□□□ -0.59
NXF1-216ENST00000533499 COX7B2Q8TF08 81 aa11.34□□□□□ -0.59
NXF1-216ENST00000533499 C20orf202A1L168 122 aa11.33□□□□□ -0.6
NXF1-216ENST00000533499 NDUFA1O15239 70 aa11.33□□□□□ -0.6
NXF1-216ENST00000533499 CNBPP62633 177 aaKnown RBP11.33□□□□□ -0.6
NXF1-216ENST00000533499 C2orf82Q6UX34 121 aa11.33□□□□□ -0.6
NXF1-216ENST00000533499 C2orf48Q96LS8 159 aa11.33□□□□□ -0.6
NXF1-216ENST00000533499 Q6ZRU5 148 aa11.32□□□□□ -0.6
NXF1-216ENST00000533499 HECTD4Q9Y4D8 3996 aa11.31□□□□□ -0.6
NXF1-216ENST00000533499 EPPK1P58107 5090 aaKnown RBP11.31□□□□□ -0.6
NXF1-216ENST00000533499 KRTAP10-1P60331 282 aa11.31□□□□□ -0.6
NXF1-216ENST00000533499 KIAA0087Q14695 138 aa11.31□□□□□ -0.6
NXF1-216ENST00000533499 LINC01545Q5VT33 79 aa11.31□□□□□ -0.6
NXF1-216ENST00000533499 UNQ6190/PRO20217Q6UXQ8 127 aa11.31□□□□□ -0.6
NXF1-216ENST00000533499 Q8IZM0 81 aa11.31□□□□□ -0.6
NXF1-216ENST00000533499 TMEM223A0PJW6 202 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms