RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PRSS3P2Q8NHM4 247 aa13.1□□□□□ -0.31
CCS-208ENST00000533244 MALP21145 153 aa13.09□□□□□ -0.31
CCS-208ENST00000533244 G0S2P27469 103 aa13.09□□□□□ -0.31
CCS-208ENST00000533244 LINC00173Q6ZV60 143 aa13.09□□□□□ -0.31
CCS-208ENST00000533244 C5orf38Q86SI9 138 aa13.09□□□□□ -0.31
CCS-208ENST00000533244 AMELXQ99217 191 aa13.09□□□□□ -0.31
CCS-208ENST00000533244 FAM229AH3BQW9 127 aa13.08□□□□□ -0.32
CCS-208ENST00000533244 TEX43Q6ZNM6 134 aa13.08□□□□□ -0.32
CCS-208ENST00000533244 TOMM6Q96B49 74 aa13.08□□□□□ -0.32
CCS-208ENST00000533244 LINC00526Q96FQ7 95 aa13.08□□□□□ -0.32
CCS-208ENST00000533244 LINC00242Q5T6M2 205 aa13.07□□□□□ -0.32
CCS-208ENST00000533244 TIMM17AQ99595 171 aa13.07□□□□□ -0.32
CCS-208ENST00000533244 TRAPPC1Q9Y5R8 145 aa13.07□□□□□ -0.32
CCS-208ENST00000533244 ZNF561-AS1K7EIQ3 104 aa13.06□□□□□ -0.32
CCS-208ENST00000533244 UBE2D1P51668 147 aa13.06□□□□□ -0.32
CCS-208ENST00000533244 SLC7A5P1Q8MH63 180 aa13.06□□□□□ -0.32
CCS-208ENST00000533244 SRRM2Q9UQ35 2752 aaKnown RBP13.06□□□□□ -0.32
CCS-208ENST00000533244 APOMO95445 188 aa13.05□□□□□ -0.32
CCS-208ENST00000533244 Q6ZN92 141 aa13.05□□□□□ -0.32
CCS-208ENST00000533244 LINC00528Q8N1L1 170 aa13.05□□□□□ -0.32
CCS-208ENST00000533244 IGLV4-69A0A075B6H9 119 aa13.05□□□□□ -0.32
CCS-208ENST00000533244 ZC2HC1BQ5TFG8 222 aa13.05□□□□□ -0.32
CCS-208ENST00000533244 CARD19Q96LW7 228 aa13.05□□□□□ -0.32
CCS-208ENST00000533244 C2orf88Q9BSF0 95 aa13.05□□□□□ -0.32
CCS-208ENST00000533244 VCX2Q9H322 139 aa13.05□□□□□ -0.32
CCS-208ENST00000533244 COX6A2Q02221 97 aa13.04□□□□□ -0.32
CCS-208ENST00000533244 SYCNQ0VAF6 134 aa13.04□□□□□ -0.32
CCS-208ENST00000533244 FAM19A3Q7Z5A8 133 aa13.04□□□□□ -0.32
CCS-208ENST00000533244 OR10D4PQ8NGN7 298 aa13.04□□□□□ -0.32
CCS-208ENST00000533244 SPACA4Q8TDM5 124 aa13.04□□□□□ -0.32
CCS-208ENST00000533244 LINC01549A6NIU2 74 aa13.03□□□□□ -0.32
CCS-208ENST00000533244 CHTF8P0CG12 524 aa13.03□□□□□ -0.32
CCS-208ENST00000533244 PAPPA-AS1Q5QFB9 102 aa13.03□□□□□ -0.32
CCS-208ENST00000533244 FA2HQ7L5A8 372 aa13.03□□□□□ -0.32
CCS-208ENST00000533244 ERASQ7Z444 233 aa13.03□□□□□ -0.32
CCS-208ENST00000533244 C18orf32Q8TCD1 76 aa13.03□□□□□ -0.32
CCS-208ENST00000533244 C2orf48Q96LS8 159 aa13.03□□□□□ -0.32
CCS-208ENST00000533244 A0A087WZ39 114 aa13.02□□□□□ -0.33
CCS-208ENST00000533244 URB1-AS1Q96HZ7 61 aa13.02□□□□□ -0.33
CCS-208ENST00000533244 SPAG11BQ08648 103 aa13.01□□□□□ -0.33
CCS-208ENST00000533244 Q6ZRU5 148 aa13.01□□□□□ -0.33
CCS-208ENST00000533244 CBLN2Q8IUK8 224 aa13.01□□□□□ -0.33
CCS-208ENST00000533244 ORAOV1Q8WV07 137 aa13□□□□□ -0.33
CCS-208ENST00000533244 SCGB3A1Q96QR1 104 aa13□□□□□ -0.33
CCS-208ENST00000533244 SMCO4Q9NRQ5 59 aa13□□□□□ -0.33
CCS-208ENST00000533244 LINC01561Q8N1V8 128 aa12.99□□□□□ -0.33
CCS-208ENST00000533244 CAMK2N2Q96S95 79 aa12.99□□□□□ -0.33
CCS-208ENST00000533244 PKIGQ9Y2B9 76 aa12.99□□□□□ -0.33
CCS-208ENST00000533244 PLA2G1BP04054 148 aaKnown RBP12.98□□□□□ -0.33
CCS-208ENST00000533244 KRTAP10-4P60372 401 aaPredicted RBP12.98□□□□□ -0.33
CCS-208ENST00000533244 A0A087WYN8 130 aa12.97□□□□□ -0.33
CCS-208ENST00000533244 A0A096LNI7 61 aa12.97□□□□□ -0.33
CCS-208ENST00000533244 A0A096LNJ9 63 aa12.97□□□□□ -0.33
CCS-208ENST00000533244 F8WDY8 70 aa12.97□□□□□ -0.33
CCS-208ENST00000533244 INAFM2P0DMQ5 153 aa12.97□□□□□ -0.33
CCS-208ENST00000533244 PLAC8Q9NZF1 115 aa12.97□□□□□ -0.33
CCS-208ENST00000533244 LINC00614P0C842 121 aa12.96□□□□□ -0.33
CCS-208ENST00000533244 KIAA0087Q14695 138 aa12.96□□□□□ -0.34
CCS-208ENST00000533244 RNF151Q2KHN1 245 aa12.96□□□□□ -0.34
CCS-208ENST00000533244 IGKV2-24A0A0C4DH68 120 aa12.95□□□□□ -0.34
CCS-208ENST00000533244 SEC11AP67812 179 aa12.95□□□□□ -0.34
CCS-208ENST00000533244 MRPL35Q9NZE8 188 aaKnown RBP12.95□□□□□ -0.34
CCS-208ENST00000533244 HERVK_113P63121 156 aa12.94□□□□□ -0.34
CCS-208ENST00000533244 LINC00474Q9P2X8 69 aa12.94□□□□□ -0.34
CCS-208ENST00000533244 LOC107984640A0A0U1RRK4 108 aa12.93□□□□□ -0.34
CCS-208ENST00000533244 MAJINQ3KP22 176 aa12.93□□□□□ -0.34
CCS-208ENST00000533244 A0A0J9YXV3 536 aa12.92□□□□□ -0.34
CCS-208ENST00000533244 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.92□□□□□ -0.34
CCS-208ENST00000533244 NDUFA1O15239 70 aa12.92□□□□□ -0.34
CCS-208ENST00000533244 RAB5BP61020 215 aa12.92□□□□□ -0.34
CCS-208ENST00000533244 DPH3Q96FX2 82 aa12.92□□□□□ -0.34
CCS-208ENST00000533244 HBDP02042 147 aa12.91□□□□□ -0.34
CCS-208ENST00000533244 PTTG1IPP53801 180 aa12.91□□□□□ -0.34
CCS-208ENST00000533244 C10orf25Q5T742 122 aa12.91□□□□□ -0.34
CCS-208ENST00000533244 CST9LQ9H4G1 147 aa12.91□□□□□ -0.34
CCS-208ENST00000533244 CDKN2A-AS1Q9UH64 79 aa12.91□□□□□ -0.34
CCS-208ENST00000533244 MYCBP2O75592 4640 aa12.91□□□□□ -0.34
CCS-208ENST00000533244 PMVKQ15126 192 aa12.9□□□□□ -0.34
CCS-208ENST00000533244 FLG2Q5D862 2391 aaPredicted RBP12.9□□□□□ -0.34
CCS-208ENST00000533244 IGLV5-45A0A087WSX0 123 aa12.89□□□□□ -0.35
CCS-208ENST00000533244 TINCRA0A1B0GVN0 87 aa12.89□□□□□ -0.35
CCS-208ENST00000533244 PDZD11Q5EBL8 140 aa12.89□□□□□ -0.35
CCS-208ENST00000533244 UNQ6190/PRO20217Q6UXQ8 127 aa12.89□□□□□ -0.35
CCS-208ENST00000533244 STPG4Q8N801 248 aa12.89□□□□□ -0.35
CCS-208ENST00000533244 GEMIN7Q9H840 131 aaKnown RBP12.89□□□□□ -0.35
CCS-208ENST00000533244 RPL37AP61513 92 aaKnown RBP12.88□□□□□ -0.35
CCS-208ENST00000533244 C6orf48Q9UBA6 75 aa12.88□□□□□ -0.35
CCS-208ENST00000533244 PMCHL1Q16048 86 aa12.88□□□□□ -0.35
CCS-208ENST00000533244 TLX1NBP0CAT3 122 aa12.87□□□□□ -0.35
CCS-208ENST00000533244 GAGE2BQ13066 116 aa12.87□□□□□ -0.35
CCS-208ENST00000533244 Q8IZM0 81 aa12.87□□□□□ -0.35
CCS-208ENST00000533244 CHCHD1Q96BP2 118 aaKnown RBP12.87□□□□□ -0.35
CCS-208ENST00000533244 TRGC2P03986 189 aa12.86□□□□□ -0.35
CCS-208ENST00000533244 TRBV30A0A0K0K1B3 111 aa12.85□□□□□ -0.35
CCS-208ENST00000533244 COLCA2A8K830 154 aa12.85□□□□□ -0.35
CCS-208ENST00000533244 C2orf82Q6UX34 121 aa12.85□□□□□ -0.35
CCS-208ENST00000533244 LINC00469Q8N7U9 141 aa12.85□□□□□ -0.35
CCS-208ENST00000533244 SMIM1B2RUZ4 78 aa12.84□□□□□ -0.35
CCS-208ENST00000533244 RPL18AQ02543 176 aaKnown RBP12.84□□□□□ -0.35
CCS-208ENST00000533244 PACRGQ96M98 296 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 350.1 ms