RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 LINC01548A6NM66 108 aa5.16□□□□□ -1.58
TGFBR3-210ENST00000533089 PLCE1Q9P212 2302 aa5.16□□□□□ -1.58
TGFBR3-210ENST00000533089 NOTCH2Q04721 2471 aa5.16□□□□□ -1.58
TGFBR3-210ENST00000533089 C8orf87E5RJ46 101 aa5.16□□□□□ -1.58
TGFBR3-210ENST00000533089 RNASE3P12724 160 aaKnown RBP5.16□□□□□ -1.58
TGFBR3-210ENST00000533089 LINC00208Q96KT6 92 aa5.16□□□□□ -1.58
TGFBR3-210ENST00000533089 IGLV2-14P01704 120 aa5.15□□□□□ -1.58
TGFBR3-210ENST00000533089 CDKN2A-AS1Q9UH64 79 aa5.15□□□□□ -1.58
TGFBR3-210ENST00000533089 ARHGAP32A7KAX9 2087 aa5.15□□□□□ -1.59
TGFBR3-210ENST00000533089 FHL3Q13643 280 aa5.15□□□□□ -1.59
TGFBR3-210ENST00000533089 DCANP1Q8TF63 244 aa5.15□□□□□ -1.59
TGFBR3-210ENST00000533089 TRBV6-5A0A0K0K1A5 114 aa5.15□□□□□ -1.59
TGFBR3-210ENST00000533089 LCA10Q71F78 164 aa5.15□□□□□ -1.59
TGFBR3-210ENST00000533089 Q9UF83 564 aa5.15□□□□□ -1.59
TGFBR3-210ENST00000533089 MALRD1Q5VYJ5 2156 aa5.14□□□□□ -1.59
TGFBR3-210ENST00000533089 LINC00482Q8N8I6 264 aa5.14□□□□□ -1.59
TGFBR3-210ENST00000533089 ANKHD1Q8IWZ3 2542 aaKnown RBP5.14□□□□□ -1.59
TGFBR3-210ENST00000533089 LY6G6DO95868 133 aa5.14□□□□□ -1.59
TGFBR3-210ENST00000533089 IGLV4-3A0A075B6K6 122 aa5.14□□□□□ -1.59
TGFBR3-210ENST00000533089 TRBV10-3A0A0K0K1G6 114 aa5.14□□□□□ -1.59
TGFBR3-210ENST00000533089 A0A087WYN8 130 aa5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 PRM2P04554 102 aa5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 REG3AQ06141 175 aa5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 A0A0J9YX75 114 aa5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 Q6ZTI0 123 aa5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 Q6ZVQ6 151 aa5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 C7orf33Q8WU49 177 aa5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 TMEM131Q92545 1883 aa5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 GAS8-AS1O95177 125 aa5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 C6orf99Q4VX62 202 aa5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 Q6YL49 198 aa5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 TNFRSF13BO14836 293 aaPredicted RBP5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 FSTL3O95633 263 aa5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 C7orf65Q6ZTY9 151 aa5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 MED13Q9UHV7 2174 aa5.13□□□□□ -1.59
TGFBR3-210ENST00000533089 CRIP1P50238 77 aa5.12□□□□□ -1.59
TGFBR3-210ENST00000533089 RPL28P46779 137 aaKnown RBP5.12□□□□□ -1.59
TGFBR3-210ENST00000533089 E7EUB6 86 aa5.12□□□□□ -1.59
TGFBR3-210ENST00000533089 IGLV1-47P01700 117 aa5.12□□□□□ -1.59
TGFBR3-210ENST00000533089 MED14OSP0DP75 135 aa5.12□□□□□ -1.59
TGFBR3-210ENST00000533089 RBM12B-AS1Q9P1G2 102 aa5.12□□□□□ -1.59
TGFBR3-210ENST00000533089 NTM-AS1Q6ZSK4 140 aa5.12□□□□□ -1.59
TGFBR3-210ENST00000533089 XAGE1AQ9HD64 81 aa5.12□□□□□ -1.59
TGFBR3-210ENST00000533089 CEP295Q9C0D2 2601 aa5.11□□□□□ -1.59
TGFBR3-210ENST00000533089 A8MUN3 132 aa5.11□□□□□ -1.59
TGFBR3-210ENST00000533089 TSPEAR-AS2P59090 65 aa5.11□□□□□ -1.59
TGFBR3-210ENST00000533089 CDSNQ15517 529 aa5.11□□□□□ -1.59
TGFBR3-210ENST00000533089 Q6ZQY7 126 aa5.11□□□□□ -1.59
TGFBR3-210ENST00000533089 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.11□□□□□ -1.59
TGFBR3-210ENST00000533089 LINC01547P58512 204 aaPredicted RBP5.11□□□□□ -1.59
TGFBR3-210ENST00000533089 SPINT4Q6UDR6 99 aa5.11□□□□□ -1.59
TGFBR3-210ENST00000533089 CIRBP-AS1Q8TBR5 109 aa5.11□□□□□ -1.59
TGFBR3-210ENST00000533089 COL4A2P08572 1712 aa5.11□□□□□ -1.59
TGFBR3-210ENST00000533089 CD164L2Q6UWJ8 174 aa5.11□□□□□ -1.59
TGFBR3-210ENST00000533089 CHCHD10Q8WYQ3 142 aaPredicted RBP5.11□□□□□ -1.59
TGFBR3-210ENST00000533089 SHANK1Q9Y566 2161 aa5.1□□□□□ -1.59
TGFBR3-210ENST00000533089 RPL37AP8A6NKH3 93 aa5.1□□□□□ -1.59
TGFBR3-210ENST00000533089 MSMPQ1L6U9 139 aa5.1□□□□□ -1.59
TGFBR3-210ENST00000533089 ZFAND2AQ8N6M9 145 aa5.1□□□□□ -1.59
TGFBR3-210ENST00000533089 LMO4P61968 165 aa5.1□□□□□ -1.59
TGFBR3-210ENST00000533089 CCDC140Q96MF4 163 aa5.1□□□□□ -1.59
TGFBR3-210ENST00000533089 PRR15Q8IV56 129 aa5.1□□□□□ -1.59
TGFBR3-210ENST00000533089 ADAMTSL4-AS1Q5T5F5 129 aa5.1□□□□□ -1.59
TGFBR3-210ENST00000533089 CREBBPQ92793 2442 aa5.1□□□□□ -1.59
TGFBR3-210ENST00000533089 A0A096LNJ9 63 aa5.09□□□□□ -1.59
TGFBR3-210ENST00000533089 DEFB114Q30KQ6 69 aa5.09□□□□□ -1.59
TGFBR3-210ENST00000533089 IGKV2-28A0A075B6P5 120 aa5.09□□□□□ -1.59
TGFBR3-210ENST00000533089 IGKV2D-28P01615 120 aa5.09□□□□□ -1.59
TGFBR3-210ENST00000533089 PCOTHQ58A44 107 aa5.09□□□□□ -1.59
TGFBR3-210ENST00000533089 LINC00467Q9BRT7 94 aa5.09□□□□□ -1.59
TGFBR3-210ENST00000533089 TNCP24821 2201 aa5.09□□□□□ -1.59
TGFBR3-210ENST00000533089 TRAV10A0A0B4J240 114 aa5.09□□□□□ -1.59
TGFBR3-210ENST00000533089 IGF1P05019 195 aa5.09□□□□□ -1.6
TGFBR3-210ENST00000533089 C11orf71Q6IPW1 123 aa5.08□□□□□ -1.6
TGFBR3-210ENST00000533089 MED13LQ71F56 2210 aa5.08□□□□□ -1.6
TGFBR3-210ENST00000533089 P0C879 139 aa5.08□□□□□ -1.6
TGFBR3-210ENST00000533089 IBA57-AS1B1ANH7 110 aa5.08□□□□□ -1.6
TGFBR3-210ENST00000533089 ATRXP46100 2492 aa5.08□□□□□ -1.6
TGFBR3-210ENST00000533089 SMCR5Q8TEV8 140 aa5.08□□□□□ -1.6
TGFBR3-210ENST00000533089 NAV2Q8IVL1 2488 aa5.08□□□□□ -1.6
TGFBR3-210ENST00000533089 IGLV4-69A0A075B6H9 119 aa5.07□□□□□ -1.6
TGFBR3-210ENST00000533089 ODF3BA8MYP8 253 aa5.07□□□□□ -1.6
TGFBR3-210ENST00000533089 C10orf99Q6UWK7 81 aa5.07□□□□□ -1.6
TGFBR3-210ENST00000533089 Q8N814 137 aa5.07□□□□□ -1.6
TGFBR3-210ENST00000533089 FREM1Q5H8C1 2179 aa5.06□□□□□ -1.6
TGFBR3-210ENST00000533089 PRR14LQ5THK1 2151 aa5.06□□□□□ -1.6
TGFBR3-210ENST00000533089 BCE1O60756 84 aa5.06□□□□□ -1.6
TGFBR3-210ENST00000533089 H0Y9P7 68 aa5.06□□□□□ -1.6
TGFBR3-210ENST00000533089 HIVEP2P31629 2446 aa5.06□□□□□ -1.6
TGFBR3-210ENST00000533089 TLN1Q9Y490 2541 aaKnown RBP5.06□□□□□ -1.6
TGFBR3-210ENST00000533089 Q6ZPA2 131 aa5.05□□□□□ -1.6
TGFBR3-210ENST00000533089 BBC3Q96PG8 261 aaPredicted RBP5.05□□□□□ -1.6
TGFBR3-210ENST00000533089 hDV103S1A0JD37 113 aa5.05□□□□□ -1.6
TGFBR3-210ENST00000533089 ATP11AUNQ6ZP68 121 aa5.05□□□□□ -1.6
TGFBR3-210ENST00000533089 TM2D3Q9BRN9 247 aa5.05□□□□□ -1.6
TGFBR3-210ENST00000533089 SYCNQ0VAF6 134 aa5.05□□□□□ -1.6
TGFBR3-210ENST00000533089 LRP4O75096 1905 aa5.05□□□□□ -1.6
TGFBR3-210ENST00000533089 K7EQG2 157 aa5.05□□□□□ -1.6
TGFBR3-210ENST00000533089 EIF4EBP1Q13541 118 aaPredicted RBP5.04□□□□□ -1.6
TGFBR3-210ENST00000533089 KPRPQ5T749 579 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms