RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 HIST1H2BKO60814 126 aa8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 HIST1H2BJP06899 126 aa8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 HIST1H2BOP23527 126 aa8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 HIST1H2BBP33778 126 aa8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 NDUFA6P56556 154 aa8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 HIST1H2BDP58876 126 aa8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 HIST1H2BCP62807 126 aa8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 HIST2H2BEQ16778 126 aa8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 C14orf177Q52M58 125 aa8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 ZC2HC1BQ5TFG8 222 aa8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 KRTAP26-1Q6PEX3 210 aa8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 HIST1H2BHQ93079 126 aa8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 HIST1H2BNQ99877 126 aa8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 HIST1H2BMQ99879 126 aa8.5□□□□□ -1.05
TRAPPC4-212ENST00000533058 A0A096LNJ9 63 aa8.49□□□□□ -1.05
TRAPPC4-212ENST00000533058 MALP21145 153 aa8.49□□□□□ -1.05
TRAPPC4-212ENST00000533058 FOXI1Q12951 378 aa8.49□□□□□ -1.05
TRAPPC4-212ENST00000533058 CFAP161Q6P656 301 aa8.49□□□□□ -1.05
TRAPPC4-212ENST00000533058 CD164L2Q6UWJ8 174 aa8.49□□□□□ -1.05
TRAPPC4-212ENST00000533058 FAM19A2Q8N3H0 131 aa8.49□□□□□ -1.05
TRAPPC4-212ENST00000533058 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC4-212ENST00000533058 COX7A2LO14548 114 aa8.48□□□□□ -1.05
TRAPPC4-212ENST00000533058 ATP5LO75964 103 aa8.48□□□□□ -1.05
TRAPPC4-212ENST00000533058 AMELXQ99217 191 aa8.48□□□□□ -1.05
TRAPPC4-212ENST00000533058 KRTAP3-3Q9BYR6 98 aa8.48□□□□□ -1.05
TRAPPC4-212ENST00000533058 KRTAP3-2Q9BYR7 98 aa8.48□□□□□ -1.05
TRAPPC4-212ENST00000533058 PDZD11Q5EBL8 140 aa8.47□□□□□ -1.05
TRAPPC4-212ENST00000533058 LINC00173Q6ZV60 143 aa8.47□□□□□ -1.05
TRAPPC4-212ENST00000533058 C5orf38Q86SI9 138 aa8.47□□□□□ -1.05
TRAPPC4-212ENST00000533058 hDV102S1A0JD36 115 aa8.46□□□□□ -1.06
TRAPPC4-212ENST00000533058 PRSS1P07477 247 aa8.46□□□□□ -1.06
TRAPPC4-212ENST00000533058 UBE2D1P51668 147 aa8.46□□□□□ -1.06
TRAPPC4-212ENST00000533058 PMVKQ15126 192 aa8.46□□□□□ -1.06
TRAPPC4-212ENST00000533058 GEMIN7Q9H840 131 aaKnown RBP8.46□□□□□ -1.06
TRAPPC4-212ENST00000533058 NUPR1O60356 82 aa8.45□□□□□ -1.06
TRAPPC4-212ENST00000533058 LINC00310P59036 64 aa8.45□□□□□ -1.06
TRAPPC4-212ENST00000533058 SEC11AP67812 179 aa8.45□□□□□ -1.06
TRAPPC4-212ENST00000533058 HIGD2BQ4VC39 106 aa8.45□□□□□ -1.06
TRAPPC4-212ENST00000533058 LINC00242Q5T6M2 205 aa8.45□□□□□ -1.06
TRAPPC4-212ENST00000533058 Q6ZSA8 131 aa8.45□□□□□ -1.06
TRAPPC4-212ENST00000533058 CST9LQ9H4G1 147 aa8.45□□□□□ -1.06
TRAPPC4-212ENST00000533058 IGHV1-58A0A0C4DH39 117 aa8.44□□□□□ -1.06
TRAPPC4-212ENST00000533058 A0A0J9YXV3 536 aa8.44□□□□□ -1.06
TRAPPC4-212ENST00000533058 TMEM238LA0A1B0GVL6 79 aa8.44□□□□□ -1.06
TRAPPC4-212ENST00000533058 EPM2AB3EWF7 344 aa8.44□□□□□ -1.06
TRAPPC4-212ENST00000533058 LEPROTL1O95214 131 aa8.44□□□□□ -1.06
TRAPPC4-212ENST00000533058 APOMO95445 188 aa8.44□□□□□ -1.06
TRAPPC4-212ENST00000533058 FABP4P15090 132 aa8.44□□□□□ -1.06
TRAPPC4-212ENST00000533058 IFI27L1Q96BM0 104 aa8.44□□□□□ -1.06
TRAPPC4-212ENST00000533058 H0Y8G0 127 aa8.43□□□□□ -1.06
TRAPPC4-212ENST00000533058 HERVK_113P63121 156 aa8.43□□□□□ -1.06
TRAPPC4-212ENST00000533058 COX6A2Q02221 97 aa8.43□□□□□ -1.06
TRAPPC4-212ENST00000533058 C15orf56Q8N910 161 aa8.43□□□□□ -1.06
TRAPPC4-212ENST00000533058 FAM30AQ9NZY2 134 aa8.43□□□□□ -1.06
TRAPPC4-212ENST00000533058 HSPB8Q9UJY1 196 aa8.43□□□□□ -1.06
TRAPPC4-212ENST00000533058 DNAH8Q96JB1 4490 aa8.42□□□□□ -1.06
TRAPPC4-212ENST00000533058 IGHV3OR16-9A0A0B4J2B5 98 aa8.42□□□□□ -1.06
TRAPPC4-212ENST00000533058 ZNF561-AS1K7EIQ3 104 aa8.42□□□□□ -1.06
TRAPPC4-212ENST00000533058 LINC00469Q8N7U9 141 aa8.42□□□□□ -1.06
TRAPPC4-212ENST00000533058 ORAOV1Q8WV07 137 aa8.41□□□□□ -1.06
TRAPPC4-212ENST00000533058 PACRGQ96M98 296 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC4-212ENST00000533058 A0A087WZ39 114 aa8.4□□□□□ -1.06
TRAPPC4-212ENST00000533058 GVQW2A0A096LPI5 108 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC4-212ENST00000533058 TINCRA0A1B0GVN0 87 aa8.4□□□□□ -1.06
TRAPPC4-212ENST00000533058 CHTOPQ9Y3Y2 248 aaKnown RBP8.4□□□□□ -1.06
TRAPPC4-212ENST00000533058 FAT1Q14517 4588 aa8.39□□□□□ -1.07
TRAPPC4-212ENST00000533058 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC4-212ENST00000533058 S100A6P06703 90 aa8.39□□□□□ -1.07
TRAPPC4-212ENST00000533058 SPAG11BQ08648 103 aa8.39□□□□□ -1.07
TRAPPC4-212ENST00000533058 Q5VSD8 79 aa8.39□□□□□ -1.07
TRAPPC4-212ENST00000533058 FAM19A3Q7Z5A8 133 aa8.39□□□□□ -1.07
TRAPPC4-212ENST00000533058 LINC00526Q96FQ7 95 aa8.39□□□□□ -1.07
TRAPPC4-212ENST00000533058 CHAC1Q9BUX1 264 aa8.39□□□□□ -1.07
TRAPPC4-212ENST00000533058 CDKN2A-AS1Q9UH64 79 aa8.39□□□□□ -1.07
TRAPPC4-212ENST00000533058 IGHV3-64A0A075B6Q5 118 aa8.38□□□□□ -1.07
TRAPPC4-212ENST00000533058 FAM229AH3BQW9 127 aa8.38□□□□□ -1.07
TRAPPC4-212ENST00000533058 H3BRM9 83 aa8.38□□□□□ -1.07
TRAPPC4-212ENST00000533058 PRSS2P07478 247 aa8.38□□□□□ -1.07
TRAPPC4-212ENST00000533058 COA6Q5JTJ3 125 aaKnown RBP8.38□□□□□ -1.07
TRAPPC4-212ENST00000533058 LCE2DQ5TA82 110 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC4-212ENST00000533058 OR10D4PQ8NGN7 298 aa8.38□□□□□ -1.07
TRAPPC4-212ENST00000533058 MAP1LC3CQ9BXW4 147 aa8.38□□□□□ -1.07
TRAPPC4-212ENST00000533058 TOMM7Q9P0U1 55 aa8.38□□□□□ -1.07
TRAPPC4-212ENST00000533058 IGLV4-69A0A075B6H9 119 aa8.37□□□□□ -1.07
TRAPPC4-212ENST00000533058 TRAV12-1A0A0B4J245 112 aa8.37□□□□□ -1.07
TRAPPC4-212ENST00000533058 SMR3BP02814 79 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC4-212ENST00000533058 IGLC3P0DOY3 106 aa8.37□□□□□ -1.07
TRAPPC4-212ENST00000533058 LINC01620Q4KN68 170 aa8.37□□□□□ -1.07
TRAPPC4-212ENST00000533058 LINC00528Q8N1L1 170 aa8.37□□□□□ -1.07
TRAPPC4-212ENST00000533058 C9orf163Q8N9P6 203 aa8.37□□□□□ -1.07
TRAPPC4-212ENST00000533058 VPS13BQ7Z7G8 4022 aa8.37□□□□□ -1.07
TRAPPC4-212ENST00000533058 J3QL48 77 aa8.36□□□□□ -1.07
TRAPPC4-212ENST00000533058 CNBPP62633 177 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-212ENST00000533058 TMEM170BQ5T4T1 132 aa8.36□□□□□ -1.07
TRAPPC4-212ENST00000533058 LINC01561Q8N1V8 128 aa8.36□□□□□ -1.07
TRAPPC4-212ENST00000533058 CAMK2N2Q96S95 79 aa8.36□□□□□ -1.07
TRAPPC4-212ENST00000533058 MRPL35Q9NZE8 188 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-212ENST00000533058 C11orf86A6NJI1 115 aa8.35□□□□□ -1.07
TRAPPC4-212ENST00000533058 SPINK8P0C7L1 97 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms