RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 C19orf73Q9NVV2 129 aa8.26□□□□□ -1.09
CSRP1-215ENST00000532313 NBDYA0A0U1RRE5 68 aa8.26□□□□□ -1.09
CSRP1-215ENST00000532313 IGLC3P0DOY3 106 aa8.26□□□□□ -1.09
CSRP1-215ENST00000532313 NTN5Q8WTR8 489 aaPredicted RBP8.26□□□□□ -1.09
CSRP1-215ENST00000532313 RNF185Q96GF1 192 aa8.26□□□□□ -1.09
CSRP1-215ENST00000532313 A0A1B0GV72 72 aa8.26□□□□□ -1.09
CSRP1-215ENST00000532313 SS18L2Q9UHA2 77 aa8.25□□□□□ -1.09
CSRP1-215ENST00000532313 X6R8D5 127 aa8.25□□□□□ -1.09
CSRP1-215ENST00000532313 PRM2P04554 102 aa8.25□□□□□ -1.09
CSRP1-215ENST00000532313 LINC00336Q6ZUF6 198 aa8.25□□□□□ -1.09
CSRP1-215ENST00000532313 MUSTN1Q8IVN3 82 aa8.25□□□□□ -1.09
CSRP1-215ENST00000532313 PLAC8L1A1L4L8 177 aa8.25□□□□□ -1.09
CSRP1-215ENST00000532313 CELA1Q9UNI1 258 aa8.25□□□□□ -1.09
CSRP1-215ENST00000532313 SPATA12Q7Z6I5 190 aa8.25□□□□□ -1.09
CSRP1-215ENST00000532313 JMJD7-PLA2G4BH0Y9G9 81 aa8.24□□□□□ -1.09
CSRP1-215ENST00000532313 C16orf90A8MZG2 172 aa8.24□□□□□ -1.09
CSRP1-215ENST00000532313 ZNF22P17026 224 aaPredicted RBP8.24□□□□□ -1.09
CSRP1-215ENST00000532313 WFDC10BQ8IUB3 73 aa8.24□□□□□ -1.09
CSRP1-215ENST00000532313 MTURNQ8N3F0 131 aa8.24□□□□□ -1.09
CSRP1-215ENST00000532313 ANKRD29Q8N6D5 301 aa8.24□□□□□ -1.09
CSRP1-215ENST00000532313 HIGD1BQ9P298 99 aa8.24□□□□□ -1.09
CSRP1-215ENST00000532313 COL27A1Q8IZC6 1860 aaPredicted RBP8.24□□□□□ -1.09
CSRP1-215ENST00000532313 hADV29S1A0JD25 119 aa8.23□□□□□ -1.09
CSRP1-215ENST00000532313 Q8NAQ8 132 aa8.23□□□□□ -1.09
CSRP1-215ENST00000532313 NRACQ8N912 160 aa8.23□□□□□ -1.09
CSRP1-215ENST00000532313 XAGE1AQ9HD64 81 aa8.23□□□□□ -1.09
CSRP1-215ENST00000532313 NDUFS5O43920 106 aa8.22□□□□□ -1.09
CSRP1-215ENST00000532313 TIMM17BO60830 172 aa8.22□□□□□ -1.09
CSRP1-215ENST00000532313 HIST1H4AP62805 103 aaKnown RBP8.22□□□□□ -1.09
CSRP1-215ENST00000532313 TMEM223A0PJW6 202 aa8.22□□□□□ -1.09
CSRP1-215ENST00000532313 TMEM256-PLSCR3K7ERE1 68 aa8.22□□□□□ -1.09
CSRP1-215ENST00000532313 M0QXV9 152 aa8.22□□□□□ -1.09
CSRP1-215ENST00000532313 CYSRT1A8MQ03 144 aa8.21□□□□□ -1.09
CSRP1-215ENST00000532313 C11orf72Q8NBR9 251 aa8.21□□□□□ -1.09
CSRP1-215ENST00000532313 PLA2G1BP04054 148 aaKnown RBP8.21□□□□□ -1.1
CSRP1-215ENST00000532313 TM2D3Q9BRN9 247 aa8.21□□□□□ -1.1
CSRP1-215ENST00000532313 DLEU1O43261 78 aa8.21□□□□□ -1.1
CSRP1-215ENST00000532313 BAALC-AS2P0C853 105 aa8.2□□□□□ -1.1
CSRP1-215ENST00000532313 TCL1BO95988 128 aa8.2□□□□□ -1.1
CSRP1-215ENST00000532313 HAMPP81172 84 aa8.2□□□□□ -1.1
CSRP1-215ENST00000532313 LOC105371267A0A1B0GV96 52 aa8.2□□□□□ -1.1
CSRP1-215ENST00000532313 ESRGQ1W209 222 aa8.2□□□□□ -1.1
CSRP1-215ENST00000532313 KRTAP10-11P60412 298 aa8.19□□□□□ -1.1
CSRP1-215ENST00000532313 REG3GQ6UW15 175 aa8.19□□□□□ -1.1
CSRP1-215ENST00000532313 TRAV23DV6A0A075B6W5 121 aa8.19□□□□□ -1.1
CSRP1-215ENST00000532313 LINC01620Q4KN68 170 aa8.19□□□□□ -1.1
CSRP1-215ENST00000532313 DAND5Q8N907 189 aa8.18□□□□□ -1.1
CSRP1-215ENST00000532313 GOLGB1Q14789 3259 aaKnown RBP8.18□□□□□ -1.1
CSRP1-215ENST00000532313 NREPQ16612 68 aa8.17□□□□□ -1.1
CSRP1-215ENST00000532313 PYY3Q5JQD4 70 aa8.17□□□□□ -1.1
CSRP1-215ENST00000532313 PCP2Q8IVA1 136 aa8.17□□□□□ -1.1
CSRP1-215ENST00000532313 SRCAPQ6ZRS2 3230 aa8.17□□□□□ -1.1
CSRP1-215ENST00000532313 C9orf118A6NHY6 69 aa8.16□□□□□ -1.1
CSRP1-215ENST00000532313 NDUFC2-KCTD14E9PQ53 114 aa8.16□□□□□ -1.1
CSRP1-215ENST00000532313 FAM19A4Q96LR4 140 aa8.16□□□□□ -1.1
CSRP1-215ENST00000532313 RBM3P98179 157 aaKnown RBP8.16□□□□□ -1.1
CSRP1-215ENST00000532313 KRTAP10-3P60369 221 aa8.15□□□□□ -1.1
CSRP1-215ENST00000532313 SIGMAR1Q99720 223 aa8.15□□□□□ -1.1
CSRP1-215ENST00000532313 LINC00315P59091 139 aa8.15□□□□□ -1.11
CSRP1-215ENST00000532313 USP24Q9UPU5 2620 aa8.15□□□□□ -1.11
CSRP1-215ENST00000532313 C1orf137Q5JT78 98 aa8.14□□□□□ -1.11
CSRP1-215ENST00000532313 KRTAP21-3Q3LHN1 58 aa8.14□□□□□ -1.11
CSRP1-215ENST00000532313 ANKRD39Q53RE8 183 aa8.14□□□□□ -1.11
CSRP1-215ENST00000532313 LINC00173Q6ZV60 143 aa8.14□□□□□ -1.11
CSRP1-215ENST00000532313 LINC00308Q8TCZ7 52 aa8.14□□□□□ -1.11
CSRP1-215ENST00000532313 IGKV2-28A0A075B6P5 120 aa8.13□□□□□ -1.11
CSRP1-215ENST00000532313 IGKV2D-28P01615 120 aa8.13□□□□□ -1.11
CSRP1-215ENST00000532313 COX6A2Q02221 97 aa8.13□□□□□ -1.11
CSRP1-215ENST00000532313 A0A1B0GV90 55 aa8.13□□□□□ -1.11
CSRP1-215ENST00000532313 LINC00242Q5T6M2 205 aa8.13□□□□□ -1.11
CSRP1-215ENST00000532313 IGLV4-60A0A075B6I1 120 aa8.13□□□□□ -1.11
CSRP1-215ENST00000532313 ACYP1P07311 99 aa8.13□□□□□ -1.11
CSRP1-215ENST00000532313 A0A0B4J2C4 111 aa8.12□□□□□ -1.11
CSRP1-215ENST00000532313 PPDPFLQ8WWR9 84 aa8.12□□□□□ -1.11
CSRP1-215ENST00000532313 LINC00526Q96FQ7 95 aa8.12□□□□□ -1.11
CSRP1-215ENST00000532313 F8W1H4 67 aa8.12□□□□□ -1.11
CSRP1-215ENST00000532313 NAA38Q9BRA0 125 aaKnown RBP8.12□□□□□ -1.11
CSRP1-215ENST00000532313 LINC00588Q9Y4M8 146 aa8.12□□□□□ -1.11
CSRP1-215ENST00000532313 UNQ6190/PRO20217Q6UXQ8 127 aa8.12□□□□□ -1.11
CSRP1-215ENST00000532313 DNAH10OSP0CZ25 163 aa8.11□□□□□ -1.11
CSRP1-215ENST00000532313 H0Y9J4 135 aa8.11□□□□□ -1.11
CSRP1-215ENST00000532313 RTL8CO15255 209 aa8.11□□□□□ -1.11
CSRP1-215ENST00000532313 CEP350Q5VT06 3117 aa8.1□□□□□ -1.11
CSRP1-215ENST00000532313 PRYO14603 147 aa8.1□□□□□ -1.11
CSRP1-215ENST00000532313 ZNF292O60281 2723 aa8.1□□□□□ -1.11
CSRP1-215ENST00000532313 CDPF1Q6NVV7 123 aa8.1□□□□□ -1.11
CSRP1-215ENST00000532313 IGIPA6NJ69 53 aa8.1□□□□□ -1.11
CSRP1-215ENST00000532313 A8MTW9 85 aa8.1□□□□□ -1.11
CSRP1-215ENST00000532313 ZNF73O43830 326 aaPredicted RBP8.1□□□□□ -1.11
CSRP1-215ENST00000532313 H3BMG7 143 aa8.09□□□□□ -1.11
CSRP1-215ENST00000532313 J3QL48 77 aa8.09□□□□□ -1.11
CSRP1-215ENST00000532313 WIPF1O43516 503 aa8.09□□□□□ -1.11
CSRP1-215ENST00000532313 TRBV10-2A0A0K0K1G8 114 aa8.09□□□□□ -1.11
CSRP1-215ENST00000532313 MRPL55Q7Z7F7 128 aaKnown RBP8.09□□□□□ -1.11
CSRP1-215ENST00000532313 A0A096LNI7 61 aa8.09□□□□□ -1.11
CSRP1-215ENST00000532313 A0A1B0GX51 115 aa8.08□□□□□ -1.12
CSRP1-215ENST00000532313 LIMD2Q9BT23 127 aa8.08□□□□□ -1.12
CSRP1-215ENST00000532313 A0A1W2PPM0 123 aa8.08□□□□□ -1.12
CSRP1-215ENST00000532313 RPL37AP8A6NKH3 93 aa8.08□□□□□ -1.12
CSRP1-215ENST00000532313 C6orf99Q4VX62 202 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms