RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 LEPROTL1O95214 131 aa8.37□□□□□ -1.07
COPB1-208ENST00000532088 S100A6P06703 90 aa8.37□□□□□ -1.07
COPB1-208ENST00000532088 C1orf134Q5TEV5 83 aa8.37□□□□□ -1.07
COPB1-208ENST00000532088 FAM19A2Q8N3H0 131 aa8.37□□□□□ -1.07
COPB1-208ENST00000532088 HSPB8Q9UJY1 196 aa8.37□□□□□ -1.07
COPB1-208ENST00000532088 LINC00959A0A1B0GUT2 108 aa8.36□□□□□ -1.07
COPB1-208ENST00000532088 SS18Q15532 418 aa8.36□□□□□ -1.07
COPB1-208ENST00000532088 FAM19A3Q7Z5A8 133 aa8.36□□□□□ -1.07
COPB1-208ENST00000532088 BAALCQ8WXS3 180 aa8.36□□□□□ -1.07
COPB1-208ENST00000532088 IFI27L1Q96BM0 104 aa8.36□□□□□ -1.07
COPB1-208ENST00000532088 C1orf43Q9BWL3 253 aa8.36□□□□□ -1.07
COPB1-208ENST00000532088 DNAH2Q9P225 4427 aa8.36□□□□□ -1.07
COPB1-208ENST00000532088 TRAV12-1A0A0B4J245 112 aa8.35□□□□□ -1.07
COPB1-208ENST00000532088 IFITM10A6NMD0 228 aa8.35□□□□□ -1.07
COPB1-208ENST00000532088 SEC11AP67812 179 aa8.35□□□□□ -1.07
COPB1-208ENST00000532088 PMVKQ15126 192 aa8.35□□□□□ -1.07
COPB1-208ENST00000532088 Q6ZRN7 208 aaPredicted RBP8.35□□□□□ -1.07
COPB1-208ENST00000532088 LINC00173Q6ZV60 143 aa8.35□□□□□ -1.07
COPB1-208ENST00000532088 OPRPNQ99935 248 aaPredicted RBP8.35□□□□□ -1.07
COPB1-208ENST00000532088 UBE2D1P51668 147 aa8.34□□□□□ -1.07
COPB1-208ENST00000532088 KRTAP26-1Q6PEX3 210 aa8.34□□□□□ -1.07
COPB1-208ENST00000532088 CLPSL2Q6UWE3 100 aa8.34□□□□□ -1.07
COPB1-208ENST00000532088 Q9HAA7 133 aa8.34□□□□□ -1.07
COPB1-208ENST00000532088 IGKV2D-24A0A075B6R9 120 aa8.33□□□□□ -1.08
COPB1-208ENST00000532088 TRAV13-1A0A0B4J241 112 aa8.33□□□□□ -1.08
COPB1-208ENST00000532088 B5MCH6 92 aa8.33□□□□□ -1.08
COPB1-208ENST00000532088 RNASE13Q5GAN3 156 aaKnown RBP8.33□□□□□ -1.08
COPB1-208ENST00000532088 CHCHD10Q8WYQ3 142 aaPredicted RBP8.33□□□□□ -1.08
COPB1-208ENST00000532088 CST9LQ9H4G1 147 aa8.33□□□□□ -1.08
COPB1-208ENST00000532088 IGKV3OR2-268A0A0C4DH90 116 aa8.32□□□□□ -1.08
COPB1-208ENST00000532088 KRTAP23-1A1A580 65 aa8.32□□□□□ -1.08
COPB1-208ENST00000532088 C5orf52A6NGY3 159 aa8.32□□□□□ -1.08
COPB1-208ENST00000532088 CD164L2Q6UWJ8 174 aa8.32□□□□□ -1.08
COPB1-208ENST00000532088 HIST3H2BBQ8N257 126 aa8.32□□□□□ -1.08
COPB1-208ENST00000532088 DNAH17Q9UFH2 4485 aa8.32□□□□□ -1.08
COPB1-208ENST00000532088 PRSS29PA6NIE9 313 aa8.31□□□□□ -1.08
COPB1-208ENST00000532088 PRSS1P07477 247 aa8.31□□□□□ -1.08
COPB1-208ENST00000532088 HERVK_113P63121 156 aa8.31□□□□□ -1.08
COPB1-208ENST00000532088 LINC00242Q5T6M2 205 aa8.31□□□□□ -1.08
COPB1-208ENST00000532088 MAP1LC3CQ9BXW4 147 aa8.31□□□□□ -1.08
COPB1-208ENST00000532088 IGLV10-54A0A075B6I4 117 aa8.3□□□□□ -1.08
COPB1-208ENST00000532088 TINCRA0A1B0GVN0 87 aa8.3□□□□□ -1.08
COPB1-208ENST00000532088 RTL8CO15255 209 aa8.3□□□□□ -1.08
COPB1-208ENST00000532088 PSCAO43653 123 aa8.3□□□□□ -1.08
COPB1-208ENST00000532088 FABP4P15090 132 aa8.3□□□□□ -1.08
COPB1-208ENST00000532088 S100A2P29034 98 aa8.3□□□□□ -1.08
COPB1-208ENST00000532088 FOXI1Q12951 378 aa8.3□□□□□ -1.08
COPB1-208ENST00000532088 LINC00336Q6ZUF6 198 aa8.3□□□□□ -1.08
COPB1-208ENST00000532088 SPATA12Q7Z6I5 190 aa8.3□□□□□ -1.08
COPB1-208ENST00000532088 LINC01561Q8N1V8 128 aa8.3□□□□□ -1.08
COPB1-208ENST00000532088 IGHV3OR16-9A0A0B4J2B5 98 aa8.29□□□□□ -1.08
COPB1-208ENST00000532088 GAGE12HA6NDE8 117 aa8.29□□□□□ -1.08
COPB1-208ENST00000532088 IGLC3P0DOY3 106 aa8.29□□□□□ -1.08
COPB1-208ENST00000532088 XCL1P47992 114 aa8.29□□□□□ -1.08
COPB1-208ENST00000532088 SNRPEP62304 92 aaKnown RBP8.29□□□□□ -1.08
COPB1-208ENST00000532088 ZC2HC1BQ5TFG8 222 aa8.29□□□□□ -1.08
COPB1-208ENST00000532088 DNAH10Q8IVF4 4471 aa8.29□□□□□ -1.08
COPB1-208ENST00000532088 IGLV5-45A0A087WSX0 123 aa8.28□□□□□ -1.08
COPB1-208ENST00000532088 KRTAP10-2P60368 255 aa8.28□□□□□ -1.08
COPB1-208ENST00000532088 CFAP161Q6P656 301 aa8.28□□□□□ -1.08
COPB1-208ENST00000532088 HIST1H2BLQ99880 126 aa8.28□□□□□ -1.08
COPB1-208ENST00000532088 FAM30AQ9NZY2 134 aa8.28□□□□□ -1.08
COPB1-208ENST00000532088 CHTOPQ9Y3Y2 248 aaKnown RBP8.28□□□□□ -1.08
COPB1-208ENST00000532088 FRAS1Q86XX4 4008 aa8.27□□□□□ -1.08
COPB1-208ENST00000532088 LRCOL1A6NCL2 159 aa8.27□□□□□ -1.09
COPB1-208ENST00000532088 F8VRH5 84 aa8.27□□□□□ -1.09
COPB1-208ENST00000532088 SYS1-DBNDD2H3BUS1 97 aa8.27□□□□□ -1.09
COPB1-208ENST00000532088 COX7A2LO14548 114 aa8.27□□□□□ -1.09
COPB1-208ENST00000532088 PET117Q6UWS5 81 aa8.27□□□□□ -1.09
COPB1-208ENST00000532088 MAPKAPK5-AS1Q8N8E1 139 aa8.27□□□□□ -1.09
COPB1-208ENST00000532088 GEMIN7Q9H840 131 aaKnown RBP8.27□□□□□ -1.09
COPB1-208ENST00000532088 RYR3Q15413 4870 aa8.27□□□□□ -1.09
COPB1-208ENST00000532088 IGLV4-69A0A075B6H9 119 aa8.26□□□□□ -1.09
COPB1-208ENST00000532088 A0A087WZ39 114 aa8.26□□□□□ -1.09
COPB1-208ENST00000532088 A0A0J9YXV3 536 aa8.26□□□□□ -1.09
COPB1-208ENST00000532088 AKR1D1P51857 326 aa8.26□□□□□ -1.09
COPB1-208ENST00000532088 C14orf177Q52M58 125 aa8.26□□□□□ -1.09
COPB1-208ENST00000532088 IGHV1-58A0A0C4DH39 117 aa8.25□□□□□ -1.09
COPB1-208ENST00000532088 APOMO95445 188 aa8.25□□□□□ -1.09
COPB1-208ENST00000532088 C3orf79P0CE67 100 aa8.25□□□□□ -1.09
COPB1-208ENST00000532088 COX6A2Q02221 97 aa8.25□□□□□ -1.09
COPB1-208ENST00000532088 CHAC1Q9BUX1 264 aa8.25□□□□□ -1.09
COPB1-208ENST00000532088 KRTAP4-9Q9BYQ8 210 aa8.25□□□□□ -1.09
COPB1-208ENST00000532088 MRPL35Q9NZE8 188 aaKnown RBP8.25□□□□□ -1.09
COPB1-208ENST00000532088 FAT2Q9NYQ8 4349 aa8.25□□□□□ -1.09
COPB1-208ENST00000532088 A0A087WTM6 91 aa8.24□□□□□ -1.09
COPB1-208ENST00000532088 H3BRM9 83 aa8.24□□□□□ -1.09
COPB1-208ENST00000532088 MALP21145 153 aa8.24□□□□□ -1.09
COPB1-208ENST00000532088 PLNP26678 52 aa8.24□□□□□ -1.09
COPB1-208ENST00000532088 LINC01545Q5VT33 79 aa8.24□□□□□ -1.09
COPB1-208ENST00000532088 GVQW2A0A096LPI5 108 aaPredicted RBP8.23□□□□□ -1.09
COPB1-208ENST00000532088 C11orf86A6NJI1 115 aa8.23□□□□□ -1.09
COPB1-208ENST00000532088 USP17L23D6RBM5 183 aa8.23□□□□□ -1.09
COPB1-208ENST00000532088 C5orf38Q86SI9 138 aa8.23□□□□□ -1.09
COPB1-208ENST00000532088 LINC00469Q8N7U9 141 aa8.23□□□□□ -1.09
COPB1-208ENST00000532088 OR10D4PQ8NGN7 298 aa8.23□□□□□ -1.09
COPB1-208ENST00000532088 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
COPB1-208ENST00000532088 IGHV3-64A0A075B6Q5 118 aa8.22□□□□□ -1.09
COPB1-208ENST00000532088 C20orf202A1L168 122 aa8.22□□□□□ -1.09
COPB1-208ENST00000532088 F8WDY8 70 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms