RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 HCG22E2RYF7 251 aa3.24□□□□□ -1.89
ECHDC1-222ENST00000531967 COX6CP09669 75 aa3.24□□□□□ -1.89
ECHDC1-222ENST00000531967 P0C880 135 aa3.24□□□□□ -1.89
ECHDC1-222ENST00000531967 FXYD3Q14802 87 aa3.24□□□□□ -1.89
ECHDC1-222ENST00000531967 A0A087WYN8 130 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 A0A0J9YX75 114 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 IGHV3-33P01772 117 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 DEFB113Q30KQ7 82 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 CYP4F30PQ9H0H9 118 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 CDH23Q9H251 3354 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 SEC16AO15027 2179 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 REV3LO60673 3130 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 IGLV2-18A0A075B6J9 118 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 TRAV10A0A0B4J240 114 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 ERC2-IT1O76042 136 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 C14orf177Q52M58 125 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 LINC00612Q8N6U2 182 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 Q8N9P0 234 aaPredicted RBP3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 KLK12Q9UKR0 248 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 S4R3C0 116 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 DNAH14Q0VDD8 3507 aa3.23□□□□□ -1.89
ECHDC1-222ENST00000531967 A0A087WVE0 104 aa3.22□□□□□ -1.89
ECHDC1-222ENST00000531967 TRBV10-3A0A0K0K1G6 114 aa3.22□□□□□ -1.89
ECHDC1-222ENST00000531967 KPRPQ5T749 579 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-222ENST00000531967 Q8N3U1 123 aa3.22□□□□□ -1.89
ECHDC1-222ENST00000531967 IGKV3D-7A0A0C4DH55 119 aa3.22□□□□□ -1.89
ECHDC1-222ENST00000531967 SDHAF1A6NFY7 115 aa3.22□□□□□ -1.89
ECHDC1-222ENST00000531967 ZNF815PA8K554 130 aa3.22□□□□□ -1.89
ECHDC1-222ENST00000531967 HIGD1CA8MV81 97 aa3.22□□□□□ -1.89
ECHDC1-222ENST00000531967 ODF3BA8MYP8 253 aa3.22□□□□□ -1.89
ECHDC1-222ENST00000531967 PLNP26678 52 aa3.22□□□□□ -1.89
ECHDC1-222ENST00000531967 EDDM3BP56851 147 aa3.22□□□□□ -1.89
ECHDC1-222ENST00000531967 LCE3BQ5TA77 95 aa3.22□□□□□ -1.89
ECHDC1-222ENST00000531967 Q8TAT8 98 aa3.22□□□□□ -1.89
ECHDC1-222ENST00000531967 CUL9Q8IWT3 2517 aa3.22□□□□□ -1.89
ECHDC1-222ENST00000531967 LINC01546A6NGU7 62 aa3.21□□□□□ -1.9
ECHDC1-222ENST00000531967 DEFB133Q30KQ1 61 aa3.21□□□□□ -1.9
ECHDC1-222ENST00000531967 FAM167A-AS1Q96KT0 104 aa3.21□□□□□ -1.9
ECHDC1-222ENST00000531967 ARHGAP32A7KAX9 2087 aa3.21□□□□□ -1.9
ECHDC1-222ENST00000531967 KNL1Q8NG31 2342 aa3.21□□□□□ -1.9
ECHDC1-222ENST00000531967 KRTAP7-1Q8IUC3 87 aa3.21□□□□□ -1.9
ECHDC1-222ENST00000531967 TMEM263Q8WUH6 116 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-222ENST00000531967 TRBV6-1A0A0K0K1D8 114 aa3.2□□□□□ -1.9
ECHDC1-222ENST00000531967 Q5VV11 94 aa3.2□□□□□ -1.9
ECHDC1-222ENST00000531967 CDC42SE1Q9NRR8 79 aa3.2□□□□□ -1.9
ECHDC1-222ENST00000531967 SNURFQ9Y675 71 aa3.2□□□□□ -1.9
ECHDC1-222ENST00000531967 XIRP2A4UGR9 3374 aa3.2□□□□□ -1.9
ECHDC1-222ENST00000531967 UNC13CQ8NB66 2214 aa3.2□□□□□ -1.9
ECHDC1-222ENST00000531967 PRR14LQ5THK1 2151 aa3.2□□□□□ -1.9
ECHDC1-222ENST00000531967 SPAG17Q6Q759 2223 aa3.2□□□□□ -1.9
ECHDC1-222ENST00000531967 UNC80Q8N2C7 3258 aa3.2□□□□□ -1.9
ECHDC1-222ENST00000531967 TRAV23DV6A0A075B6W5 121 aa3.19□□□□□ -1.9
ECHDC1-222ENST00000531967 CHKB-CPT1BH3BT56 60 aa3.19□□□□□ -1.9
ECHDC1-222ENST00000531967 IGHV3-30P01768 117 aa3.19□□□□□ -1.9
ECHDC1-222ENST00000531967 TFF1P04155 84 aa3.19□□□□□ -1.9
ECHDC1-222ENST00000531967 IGHV3-30-5P0DP03 117 aa3.19□□□□□ -1.9
ECHDC1-222ENST00000531967 HEATR1Q9H583 2144 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-222ENST00000531967 SPTBN5Q9NRC6 3674 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-222ENST00000531967 DNAL4O96015 105 aa3.19□□□□□ -1.9
ECHDC1-222ENST00000531967 USF3Q68DE3 2245 aa3.19□□□□□ -1.9
ECHDC1-222ENST00000531967 A8MU10 97 aa3.18□□□□□ -1.9
ECHDC1-222ENST00000531967 LIMD2Q9BT23 127 aa3.18□□□□□ -1.9
ECHDC1-222ENST00000531967 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
ECHDC1-222ENST00000531967 TMEM14BQ9NUH8 114 aa3.18□□□□□ -1.9
ECHDC1-222ENST00000531967 C9orf163Q8N9P6 203 aa3.18□□□□□ -1.9
ECHDC1-222ENST00000531967 ASXL3Q9C0F0 2248 aa3.18□□□□□ -1.9
ECHDC1-222ENST00000531967 RANBP2P49792 3224 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-222ENST00000531967 BRWD1Q9NSI6 2320 aa3.18□□□□□ -1.9
ECHDC1-222ENST00000531967 ESPL1Q14674 2120 aa3.18□□□□□ -1.9
ECHDC1-222ENST00000531967 TRAV12-1A0A0B4J245 112 aa3.17□□□□□ -1.9
ECHDC1-222ENST00000531967 TRAV40A0A0B4J280 105 aa3.17□□□□□ -1.9
ECHDC1-222ENST00000531967 DEFB119Q8N690 84 aa3.17□□□□□ -1.9
ECHDC1-222ENST00000531967 USP34Q70CQ2 3546 aa3.17□□□□□ -1.9
ECHDC1-222ENST00000531967 SZT2Q5T011 3432 aa3.17□□□□□ -1.9
ECHDC1-222ENST00000531967 ASCC3Q8N3C0 2202 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-222ENST00000531967 A0A1B0GUT8 65 aa3.17□□□□□ -1.9
ECHDC1-222ENST00000531967 KRTAP26-1Q6PEX3 210 aa3.17□□□□□ -1.9
ECHDC1-222ENST00000531967 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.17□□□□□ -1.9
ECHDC1-222ENST00000531967 HIGD2AQ9BW72 106 aa3.17□□□□□ -1.9
ECHDC1-222ENST00000531967 MED13Q9UHV7 2174 aa3.17□□□□□ -1.9
ECHDC1-222ENST00000531967 A0A0J9YY99 117 aa3.16□□□□□ -1.9
ECHDC1-222ENST00000531967 TRBV7-4A0A0J9YYF1 115 aa3.16□□□□□ -1.9
ECHDC1-222ENST00000531967 ERHP84090 104 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-222ENST00000531967 MOBPQ13875 183 aa3.16□□□□□ -1.9
ECHDC1-222ENST00000531967 LINC00483Q53H64 154 aa3.16□□□□□ -1.9
ECHDC1-222ENST00000531967 ZNF833PQ6ZTB9 187 aa3.16□□□□□ -1.9
ECHDC1-222ENST00000531967 ZNF137PP52743 207 aa3.16□□□□□ -1.9
ECHDC1-222ENST00000531967 MAPK1IP1LQ8NDC0 245 aa3.16□□□□□ -1.9
ECHDC1-222ENST00000531967 CACNA1EQ15878 2313 aa3.16□□□□□ -1.9
ECHDC1-222ENST00000531967 ARMS2P0C7Q2 107 aa3.15□□□□□ -1.9
ECHDC1-222ENST00000531967 R4GN34 69 aa3.15□□□□□ -1.9
ECHDC1-222ENST00000531967 LAMA1P25391 3075 aa3.15□□□□□ -1.9
ECHDC1-222ENST00000531967 CEP290O15078 2479 aa3.15□□□□□ -1.9
ECHDC1-222ENST00000531967 IGKV3D-15A0A087WSY6 115 aa3.15□□□□□ -1.91
ECHDC1-222ENST00000531967 D6R8Y8 96 aa3.15□□□□□ -1.91
ECHDC1-222ENST00000531967 F8VRH5 84 aa3.15□□□□□ -1.91
ECHDC1-222ENST00000531967 PSCAO43653 123 aa3.15□□□□□ -1.91
ECHDC1-222ENST00000531967 COX6B1P14854 86 aa3.15□□□□□ -1.91
ECHDC1-222ENST00000531967 SPINT4Q6UDR6 99 aa3.15□□□□□ -1.91
ECHDC1-222ENST00000531967 Q86TA4 180 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms