RNA–Protein interactions for RNA: ENST00000531919.1

PATL1-202, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

TSL 5

Gene PATL1, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-202ENST00000531919 NIPBLQ6KC79 2804 aaeCLIP-0.79□□□□□ -2.54
PATL1-202ENST00000531919 TRBV7-4A0A0J9YYF1 115 aa-0.8□□□□□ -2.54
PATL1-202ENST00000531919 LINC00959A0A1B0GUT2 108 aa-0.8□□□□□ -2.54
PATL1-202ENST00000531919 A6NIN4 97 aa-0.8□□□□□ -2.54
PATL1-202ENST00000531919 RRAS2P62070 204 aaPredicted RBP-0.8□□□□□ -2.54
PATL1-202ENST00000531919 COX17Q14061 63 aa-0.8□□□□□ -2.54
PATL1-202ENST00000531919 AKAP14Q86UN6 197 aa-0.8□□□□□ -2.54
PATL1-202ENST00000531919 APLNQ9ULZ1 77 aa-0.8□□□□□ -2.54
PATL1-202ENST00000531919 LINC01558Q9Y6Z2 57 aa-0.8□□□□□ -2.54
PATL1-202ENST00000531919 PDE4DIPQ5VU43 2346 aa-0.8□□□□□ -2.54
PATL1-202ENST00000531919 DNAH8Q96JB1 4490 aa-0.8□□□□□ -2.54
PATL1-202ENST00000531919 ZNF518AQ6AHZ1 1483 aa-0.8□□□□□ -2.54
PATL1-202ENST00000531919 SHANK2Q9UPX8 1470 aa-0.8□□□□□ -2.54
PATL1-202ENST00000531919 TEX15Q9BXT5 2789 aa-0.8□□□□□ -2.54
PATL1-202ENST00000531919 A0A0C4DFX4 3053 aa-0.8□□□□□ -2.54
PATL1-202ENST00000531919 TROQ12816 1431 aaPredicted RBP-0.81□□□□□ -2.54
PATL1-202ENST00000531919 KALRNO60229 2985 aa-0.81□□□□□ -2.54
PATL1-202ENST00000531919 KIF21AQ7Z4S6 1674 aa-0.81□□□□□ -2.54
PATL1-202ENST00000531919 RAPGEF6Q8TEU7 1601 aa-0.81□□□□□ -2.54
PATL1-202ENST00000531919 CCDC168Q8NDH2 2452 aa-0.81□□□□□ -2.54
PATL1-202ENST00000531919 CTXND1A0A1B0GTU2 59 aa-0.81□□□□□ -2.54
PATL1-202ENST00000531919 CPSF4LA6NMK7 179 aaKnown RBP-0.81□□□□□ -2.54
PATL1-202ENST00000531919 HCG22E2RYF7 251 aa-0.81□□□□□ -2.54
PATL1-202ENST00000531919 UQCR11O14957 56 aa-0.81□□□□□ -2.54
PATL1-202ENST00000531919 COX8AP10176 69 aa-0.81□□□□□ -2.54
PATL1-202ENST00000531919 BAGE2Q86Y30 109 aa-0.81□□□□□ -2.54
PATL1-202ENST00000531919 TMEM263Q8WUH6 116 aaKnown RBP-0.81□□□□□ -2.54
PATL1-202ENST00000531919 NBEAQ8NFP9 2946 aa-0.81□□□□□ -2.54
PATL1-202ENST00000531919 POLA1P09884 1462 aaPredicted RBP-0.81□□□□□ -2.54
PATL1-202ENST00000531919 ARAP2Q8WZ64 1704 aa-0.81□□□□□ -2.54
PATL1-202ENST00000531919 FMN2Q9NZ56 1722 aa-0.81□□□□□ -2.54
PATL1-202ENST00000531919 PKD1L2Q7Z442 2459 aa-0.81□□□□□ -2.54
PATL1-202ENST00000531919 COL4A6Q14031 1691 aa-0.81□□□□□ -2.54
PATL1-202ENST00000531919 RIMS1Q86UR5 1692 aaKnown RBP-0.81□□□□□ -2.54
PATL1-202ENST00000531919 MTORP42345 2549 aa-0.82□□□□□ -2.54
PATL1-202ENST00000531919 HMGXB3Q12766 1538 aa-0.82□□□□□ -2.54
PATL1-202ENST00000531919 TRANK1O15050 2925 aa-0.82□□□□□ -2.54
PATL1-202ENST00000531919 IGLC7A0M8Q6 106 aa-0.82□□□□□ -2.54
PATL1-202ENST00000531919 F8VRH5 84 aa-0.82□□□□□ -2.54
PATL1-202ENST00000531919 M0R2Z0 102 aa-0.82□□□□□ -2.54
PATL1-202ENST00000531919 IFNGP01579 166 aa-0.82□□□□□ -2.54
PATL1-202ENST00000531919 TPPP2P59282 170 aa-0.82□□□□□ -2.54
PATL1-202ENST00000531919 H1FX-AS1Q4G0G2 97 aa-0.82□□□□□ -2.54
PATL1-202ENST00000531919 USMG5Q96IX5 58 aa-0.82□□□□□ -2.54
PATL1-202ENST00000531919 V9GYH0 126 aa-0.82□□□□□ -2.54
PATL1-202ENST00000531919 RELNP78509 3460 aa-0.82□□□□□ -2.54
PATL1-202ENST00000531919 DOCK2Q92608 1830 aa-0.82□□□□□ -2.54
PATL1-202ENST00000531919 SETBP1Q9Y6X0 1596 aa-0.83□□□□□ -2.54
PATL1-202ENST00000531919 CMYA5Q8N3K9 4069 aa-0.83□□□□□ -2.54
PATL1-202ENST00000531919 DYNC1H1Q14204 4646 aaKnown RBP-0.83□□□□□ -2.54
PATL1-202ENST00000531919 MAGI1Q96QZ7 1491 aaPredicted RBP-0.83□□□□□ -2.54
PATL1-202ENST00000531919 TRBV7-3A0A075B6L6 115 aa-0.83□□□□□ -2.54
PATL1-202ENST00000531919 TRAV13-2A0A0B4J235 113 aa-0.83□□□□□ -2.54
PATL1-202ENST00000531919 J3QR89 54 aa-0.83□□□□□ -2.54
PATL1-202ENST00000531919 K7ERU9 68 aa-0.83□□□□□ -2.54
PATL1-202ENST00000531919 RPS25P62851 125 aaKnown RBP-0.83□□□□□ -2.54
PATL1-202ENST00000531919 C10orf128Q5T292 105 aa-0.83□□□□□ -2.54
PATL1-202ENST00000531919 C10orf113Q5VZT2 155 aa-0.83□□□□□ -2.54
PATL1-202ENST00000531919 SEC11CQ9BY50 192 aa-0.83□□□□□ -2.54
PATL1-202ENST00000531919 NAA60Q9H7X0 242 aa-0.83□□□□□ -2.54
PATL1-202ENST00000531919 NDUFA4L2Q9NRX3 87 aa-0.83□□□□□ -2.54
PATL1-202ENST00000531919 DNHD1Q96M86 4753 aa-0.83□□□□□ -2.54
PATL1-202ENST00000531919 LRRK2Q5S007 2527 aa-0.83□□□□□ -2.54
PATL1-202ENST00000531919 ZFHX3Q15911 3703 aa-0.84□□□□□ -2.54
PATL1-202ENST00000531919 ARHGEF12Q9NZN5 1544 aa-0.84□□□□□ -2.54
PATL1-202ENST00000531919 NBEAL2Q6ZNJ1 2754 aa-0.84□□□□□ -2.54
PATL1-202ENST00000531919 BTAF1O14981 1849 aa-0.84□□□□□ -2.54
PATL1-202ENST00000531919 PSME4Q14997 1843 aa-0.84□□□□□ -2.54
PATL1-202ENST00000531919 SNCGO76070 127 aa-0.84□□□□□ -2.54
PATL1-202ENST00000531919 GUCA1AP43080 201 aaPredicted RBP-0.84□□□□□ -2.54
PATL1-202ENST00000531919 DR1Q01658 176 aa-0.84□□□□□ -2.54
PATL1-202ENST00000531919 TTC9CQ8N5M4 171 aa-0.84□□□□□ -2.54
PATL1-202ENST00000531919 TSTD1Q8NFU3 115 aa-0.84□□□□□ -2.54
PATL1-202ENST00000531919 PPIP5K1Q6PFW1 1433 aa-0.84□□□□□ -2.54
PATL1-202ENST00000531919 COL12A1Q99715 3063 aa-0.84□□□□□ -2.54
PATL1-202ENST00000531919 DSPP15924 2871 aaKnown RBP-0.84□□□□□ -2.54
PATL1-202ENST00000531919 RIF1Q5UIP0 2472 aaKnown RBP-0.84□□□□□ -2.54
PATL1-202ENST00000531919 NKTRP30414 1462 aaKnown RBP-0.85□□□□□ -2.55
PATL1-202ENST00000531919 GRIN2AQ12879 1464 aa-0.85□□□□□ -2.55
PATL1-202ENST00000531919 C9orf92A6NGG3 77 aa-0.85□□□□□ -2.55
PATL1-202ENST00000531919 SYS1-DBNDD2H3BUS1 97 aa-0.85□□□□□ -2.55
PATL1-202ENST00000531919 SFT2D2O95562 160 aa-0.85□□□□□ -2.55
PATL1-202ENST00000531919 APOC3P02656 99 aa-0.85□□□□□ -2.55
PATL1-202ENST00000531919 MGPP08493 103 aa-0.85□□□□□ -2.55
PATL1-202ENST00000531919 Q8N8P6 123 aa-0.85□□□□□ -2.55
PATL1-202ENST00000531919 DPH3Q96FX2 82 aa-0.85□□□□□ -2.55
PATL1-202ENST00000531919 AQP10Q96PS8 301 aa-0.85□□□□□ -2.55
PATL1-202ENST00000531919 MGST2Q99735 147 aa-0.85□□□□□ -2.55
PATL1-202ENST00000531919 DYNLRB1Q9NP97 96 aa-0.85□□□□□ -2.55
PATL1-202ENST00000531919 WDR87Q6ZQQ6 2873 aa-0.85□□□□□ -2.55
PATL1-202ENST00000531919 USP9XQ93008 2570 aaPredicted RBP-0.85□□□□□ -2.55
PATL1-202ENST00000531919 CICQ96RK0 1608 aaPredicted RBP-0.86□□□□□ -2.55
PATL1-202ENST00000531919 UTP20O75691 2785 aaKnown RBP-0.86□□□□□ -2.55
PATL1-202ENST00000531919 LOC285095A0A1B0GVY8 99 aa-0.86□□□□□ -2.55
PATL1-202ENST00000531919 H3BNG1 76 aa-0.86□□□□□ -2.55
PATL1-202ENST00000531919 HMGN4O00479 90 aa-0.86□□□□□ -2.55
PATL1-202ENST00000531919 IGLC1P0CG04 106 aa-0.86□□□□□ -2.55
PATL1-202ENST00000531919 SMIM21Q3B7S5 101 aa-0.86□□□□□ -2.55
PATL1-202ENST00000531919 KRTAP19-5Q3LI72 72 aa-0.86□□□□□ -2.55
PATL1-202ENST00000531919 LELP1Q5T871 98 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms