RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 A0A1B0GUV1 79 aa11.78□□□□□ -0.52
SCN4B-205ENST00000531550 IGIPA6NJ69 53 aa11.78□□□□□ -0.52
SCN4B-205ENST00000531550 ATP5LO75964 103 aa11.78□□□□□ -0.52
SCN4B-205ENST00000531550 FGF6P10767 208 aa11.78□□□□□ -0.52
SCN4B-205ENST00000531550 ZNF25P17030 456 aaPredicted RBP11.78□□□□□ -0.52
SCN4B-205ENST00000531550 GAGE6Q13070 117 aa11.78□□□□□ -0.52
SCN4B-205ENST00000531550 SCGB3A1Q96QR1 104 aa11.78□□□□□ -0.52
SCN4B-205ENST00000531550 TIMM17AQ99595 171 aa11.78□□□□□ -0.52
SCN4B-205ENST00000531550 TMEM141Q96I45 108 aa11.77□□□□□ -0.53
SCN4B-205ENST00000531550 HIST1H2BLQ99880 126 aa11.77□□□□□ -0.53
SCN4B-205ENST00000531550 HSPB8Q9UJY1 196 aa11.77□□□□□ -0.53
SCN4B-205ENST00000531550 IFITM10A6NMD0 228 aa11.76□□□□□ -0.53
SCN4B-205ENST00000531550 FABP4P15090 132 aa11.76□□□□□ -0.53
SCN4B-205ENST00000531550 AMMECR1LQ6DCA0 310 aa11.76□□□□□ -0.53
SCN4B-205ENST00000531550 COX11Q9Y6N1 276 aa11.76□□□□□ -0.53
SCN4B-205ENST00000531550 TMEM262E9PQX1 116 aa11.75□□□□□ -0.53
SCN4B-205ENST00000531550 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.75□□□□□ -0.53
SCN4B-205ENST00000531550 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
SCN4B-205ENST00000531550 DGAT2L7PQ6IED9 249 aa11.75□□□□□ -0.53
SCN4B-205ENST00000531550 Q8N976 141 aa11.75□□□□□ -0.53
SCN4B-205ENST00000531550 IFI27L1Q96BM0 104 aa11.75□□□□□ -0.53
SCN4B-205ENST00000531550 LINC00173Q6ZV60 143 aa11.74□□□□□ -0.53
SCN4B-205ENST00000531550 TMEM101Q96IK0 257 aa11.74□□□□□ -0.53
SCN4B-205ENST00000531550 IGLV4-3A0A075B6K6 122 aa11.73□□□□□ -0.53
SCN4B-205ENST00000531550 A0A087WX48 190 aa11.73□□□□□ -0.53
SCN4B-205ENST00000531550 RBX1P62877 108 aa11.73□□□□□ -0.53
SCN4B-205ENST00000531550 PAPPA-AS1Q5QFB9 102 aa11.73□□□□□ -0.53
SCN4B-205ENST00000531550 OR5A1Q8NGJ0 315 aa11.73□□□□□ -0.53
SCN4B-205ENST00000531550 FAM104AQ969W3 186 aa11.73□□□□□ -0.53
SCN4B-205ENST00000531550 RMI2Q96E14 147 aa11.73□□□□□ -0.53
SCN4B-205ENST00000531550 CDC42SE2Q9NRR3 84 aa11.73□□□□□ -0.53
SCN4B-205ENST00000531550 RPL37AP61513 92 aaKnown RBP11.72□□□□□ -0.53
SCN4B-205ENST00000531550 MPV17L2Q567V2 206 aa11.72□□□□□ -0.53
SCN4B-205ENST00000531550 IGLV4-60A0A075B6I1 120 aa11.71□□□□□ -0.53
SCN4B-205ENST00000531550 IGKV2D-24A0A075B6R9 120 aa11.71□□□□□ -0.53
SCN4B-205ENST00000531550 HNRNPA3P51991 378 aaKnown RBP11.71□□□□□ -0.53
SCN4B-205ENST00000531550 Q6ZN92 141 aa11.71□□□□□ -0.53
SCN4B-205ENST00000531550 ZNF664Q8N3J9 261 aa11.71□□□□□ -0.53
SCN4B-205ENST00000531550 AMELXQ99217 191 aa11.71□□□□□ -0.53
SCN4B-205ENST00000531550 MAP1LC3CQ9BXW4 147 aa11.71□□□□□ -0.53
SCN4B-205ENST00000531550 OPRPNQ99935 248 aaPredicted RBP11.7□□□□□ -0.54
SCN4B-205ENST00000531550 Q6ZUT4 128 aa11.69□□□□□ -0.54
SCN4B-205ENST00000531550 VCX2Q9H322 139 aa11.69□□□□□ -0.54
SCN4B-205ENST00000531550 TRAV12-1A0A0B4J245 112 aa11.68□□□□□ -0.54
SCN4B-205ENST00000531550 PRSS1P07477 247 aa11.68□□□□□ -0.54
SCN4B-205ENST00000531550 C3orf79P0CE67 100 aa11.68□□□□□ -0.54
SCN4B-205ENST00000531550 PMVKQ15126 192 aa11.68□□□□□ -0.54
SCN4B-205ENST00000531550 SYS1-DBNDD2H3BUS1 97 aa11.67□□□□□ -0.54
SCN4B-205ENST00000531550 PET117Q6UWS5 81 aa11.67□□□□□ -0.54
SCN4B-205ENST00000531550 TEX43Q6ZNM6 134 aa11.67□□□□□ -0.54
SCN4B-205ENST00000531550 OR10D4PQ8NGN7 298 aa11.67□□□□□ -0.54
SCN4B-205ENST00000531550 KLK12Q9UKR0 248 aa11.67□□□□□ -0.54
SCN4B-205ENST00000531550 ANGP03950 147 aaKnown RBP11.66□□□□□ -0.54
SCN4B-205ENST00000531550 MT1HL1P0DM35 61 aa11.66□□□□□ -0.54
SCN4B-205ENST00000531550 CST9LQ9H4G1 147 aa11.66□□□□□ -0.54
SCN4B-205ENST00000531550 KRTDAPP60985 99 aa11.65□□□□□ -0.54
SCN4B-205ENST00000531550 C2orf88Q9BSF0 95 aa11.65□□□□□ -0.54
SCN4B-205ENST00000531550 RNASE13Q5GAN3 156 aaKnown RBP11.64□□□□□ -0.55
SCN4B-205ENST00000531550 ZC2HC1BQ5TFG8 222 aa11.64□□□□□ -0.55
SCN4B-205ENST00000531550 UBE2WQ96B02 151 aa11.64□□□□□ -0.55
SCN4B-205ENST00000531550 PRR34Q9NV39 138 aa11.64□□□□□ -0.55
SCN4B-205ENST00000531550 LOC105371267A0A1B0GV96 52 aa11.63□□□□□ -0.55
SCN4B-205ENST00000531550 CCL25O15444 150 aa11.63□□□□□ -0.55
SCN4B-205ENST00000531550 ODF1Q14990 250 aa11.63□□□□□ -0.55
SCN4B-205ENST00000531550 C14orf177Q52M58 125 aa11.63□□□□□ -0.55
SCN4B-205ENST00000531550 LINC00269Q8N2A0 174 aa11.63□□□□□ -0.55
SCN4B-205ENST00000531550 TNXBP22105 4242 aa11.62□□□□□ -0.55
SCN4B-205ENST00000531550 UBE2D1P51668 147 aa11.62□□□□□ -0.55
SCN4B-205ENST00000531550 REG3AQ06141 175 aa11.62□□□□□ -0.55
SCN4B-205ENST00000531550 LINC01545Q5VT33 79 aa11.62□□□□□ -0.55
SCN4B-205ENST00000531550 FAM19A3Q7Z5A8 133 aa11.62□□□□□ -0.55
SCN4B-205ENST00000531550 CHTOPQ9Y3Y2 248 aaKnown RBP11.62□□□□□ -0.55
SCN4B-205ENST00000531550 RNF213Q63HN8 5207 aa11.61□□□□□ -0.55
SCN4B-205ENST00000531550 LINC00959A0A1B0GUT2 108 aa11.61□□□□□ -0.55
SCN4B-205ENST00000531550 F8VRH5 84 aa11.61□□□□□ -0.55
SCN4B-205ENST00000531550 H0Y8G0 127 aa11.61□□□□□ -0.55
SCN4B-205ENST00000531550 LRP2P98164 4655 aa11.6□□□□□ -0.55
SCN4B-205ENST00000531550 ENHOQ6UWT2 76 aa11.6□□□□□ -0.55
SCN4B-205ENST00000531550 TRAV13-1A0A0B4J241 112 aa11.59□□□□□ -0.55
SCN4B-205ENST00000531550 TRAV8-4A0A0B4J246 113 aa11.59□□□□□ -0.55
SCN4B-205ENST00000531550 C20orf202A1L168 122 aa11.59□□□□□ -0.55
SCN4B-205ENST00000531550 CRPP02741 224 aa11.59□□□□□ -0.55
SCN4B-205ENST00000531550 AKR1D1P51857 326 aa11.59□□□□□ -0.55
SCN4B-205ENST00000531550 SEC11AP67812 179 aa11.59□□□□□ -0.55
SCN4B-205ENST00000531550 SS18Q15532 418 aa11.59□□□□□ -0.55
SCN4B-205ENST00000531550 MIAQ16674 131 aa11.59□□□□□ -0.55
SCN4B-205ENST00000531550 MRPL35Q9NZE8 188 aaKnown RBP11.59□□□□□ -0.55
SCN4B-205ENST00000531550 IGLC3P0DOY3 106 aa11.58□□□□□ -0.56
SCN4B-205ENST00000531550 JOSD1Q15040 202 aaPredicted RBP11.58□□□□□ -0.56
SCN4B-205ENST00000531550 C1orf43Q9BWL3 253 aa11.58□□□□□ -0.56
SCN4B-205ENST00000531550 IGLV4-69A0A075B6H9 119 aa11.57□□□□□ -0.56
SCN4B-205ENST00000531550 IGKV3OR2-268A0A0C4DH90 116 aa11.57□□□□□ -0.56
SCN4B-205ENST00000531550 A0A0J9YXV3 536 aa11.57□□□□□ -0.56
SCN4B-205ENST00000531550 TINCRA0A1B0GVN0 87 aa11.57□□□□□ -0.56
SCN4B-205ENST00000531550 LINC00242Q5T6M2 205 aa11.57□□□□□ -0.56
SCN4B-205ENST00000531550 CLPSL2Q6UWE3 100 aa11.57□□□□□ -0.56
SCN4B-205ENST00000531550 Q6ZRU5 148 aa11.57□□□□□ -0.56
SCN4B-205ENST00000531550 DPM2O94777 84 aa11.56□□□□□ -0.56
SCN4B-205ENST00000531550 PLNP26678 52 aa11.56□□□□□ -0.56
SCN4B-205ENST00000531550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms