RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 UNQ6190/PRO20217Q6UXQ8 127 aa11.16□□□□□ -0.62
SSSCA1-206ENST00000531405 FAM19A5Q7Z5A7 132 aaPredicted RBP11.16□□□□□ -0.62
SSSCA1-206ENST00000531405 NDUFA1O15239 70 aa11.15□□□□□ -0.62
SSSCA1-206ENST00000531405 IMMP2LQ96T52 175 aa11.15□□□□□ -0.62
SSSCA1-206ENST00000531405 C20orf78Q9BR46 151 aa11.15□□□□□ -0.62
SSSCA1-206ENST00000531405 TRBV24-1A0A075B6N3 115 aa11.14□□□□□ -0.63
SSSCA1-206ENST00000531405 H0Y9J4 135 aa11.14□□□□□ -0.63
SSSCA1-206ENST00000531405 CKS2P33552 79 aa11.14□□□□□ -0.63
SSSCA1-206ENST00000531405 RPL23P62829 140 aaKnown RBP11.14□□□□□ -0.63
SSSCA1-206ENST00000531405 FAM74A3Q4VXF1 159 aa11.14□□□□□ -0.63
SSSCA1-206ENST00000531405 C6orf48Q9UBA6 75 aa11.14□□□□□ -0.63
SSSCA1-206ENST00000531405 IFITM10A6NMD0 228 aa11.13□□□□□ -0.63
SSSCA1-206ENST00000531405 TNFRSF6BO95407 300 aa11.13□□□□□ -0.63
SSSCA1-206ENST00000531405 ADIRFQ15847 76 aa11.13□□□□□ -0.63
SSSCA1-206ENST00000531405 TMEM241Q24JQ0 296 aa11.13□□□□□ -0.63
SSSCA1-206ENST00000531405 GAGE2EQ4V326 116 aa11.13□□□□□ -0.63
SSSCA1-206ENST00000531405 KRTAP7-1Q8IUC3 87 aa11.13□□□□□ -0.63
SSSCA1-206ENST00000531405 SMIM2Q9BVW6 85 aa11.13□□□□□ -0.63
SSSCA1-206ENST00000531405 GAGE2DQ9UEU5 116 aa11.13□□□□□ -0.63
SSSCA1-206ENST00000531405 SMIM27A0A1W2PRY6 76 aa11.12□□□□□ -0.63
SSSCA1-206ENST00000531405 LINC00862A6NCI5 91 aa11.12□□□□□ -0.63
SSSCA1-206ENST00000531405 TCAPO15273 167 aa11.12□□□□□ -0.63
SSSCA1-206ENST00000531405 TLX1NBP0CAT3 122 aa11.12□□□□□ -0.63
SSSCA1-206ENST00000531405 RPL32P62910 135 aaKnown RBP11.12□□□□□ -0.63
SSSCA1-206ENST00000531405 SPANXA1Q9NS26 97 aa11.12□□□□□ -0.63
SSSCA1-206ENST00000531405 D6R8Y8 96 aa11.11□□□□□ -0.63
SSSCA1-206ENST00000531405 F8WDY8 70 aa11.11□□□□□ -0.63
SSSCA1-206ENST00000531405 HBBP68871 147 aa11.11□□□□□ -0.63
SSSCA1-206ENST00000531405 MRPS36P82909 103 aaKnown RBP11.11□□□□□ -0.63
SSSCA1-206ENST00000531405 NPYP01303 97 aa11.1□□□□□ -0.63
SSSCA1-206ENST00000531405 KRTAP1-4P0C5Y4 121 aa11.1□□□□□ -0.63
SSSCA1-206ENST00000531405 SMDT1Q9H4I9 107 aa11.1□□□□□ -0.63
SSSCA1-206ENST00000531405 MRPL54Q6P161 138 aaKnown RBP11.09□□□□□ -0.63
SSSCA1-206ENST00000531405 MUC2Q02817 5179 aa11.08□□□□□ -0.64
SSSCA1-206ENST00000531405 C9JQL5 133 aa11.08□□□□□ -0.64
SSSCA1-206ENST00000531405 M0QXV9 152 aa11.08□□□□□ -0.64
SSSCA1-206ENST00000531405 KIAA0087Q14695 138 aa11.08□□□□□ -0.64
SSSCA1-206ENST00000531405 IGLV1-50A0A075B6I6 118 aa11.07□□□□□ -0.64
SSSCA1-206ENST00000531405 TGIF2-C20orf24A0A0A6YYL0 155 aa11.07□□□□□ -0.64
SSSCA1-206ENST00000531405 A0A1B0GW15 77 aa11.07□□□□□ -0.64
SSSCA1-206ENST00000531405 UBE2BP63146 152 aa11.07□□□□□ -0.64
SSSCA1-206ENST00000531405 C2orf82Q6UX34 121 aa11.07□□□□□ -0.64
SSSCA1-206ENST00000531405 NAT8Q9UHE5 227 aa11.07□□□□□ -0.64
SSSCA1-206ENST00000531405 LINC00242Q5T6M2 205 aa11.05□□□□□ -0.64
SSSCA1-206ENST00000531405 A0A1B0GXF2 115 aa11.04□□□□□ -0.64
SSSCA1-206ENST00000531405 UBE2D1P51668 147 aa11.04□□□□□ -0.64
SSSCA1-206ENST00000531405 SRSF3P84103 164 aaKnown RBP11.04□□□□□ -0.64
SSSCA1-206ENST00000531405 C9orf129Q5T035 196 aaKnown RBP11.04□□□□□ -0.64
SSSCA1-206ENST00000531405 IGLV4-3A0A075B6K6 122 aa11.03□□□□□ -0.64
SSSCA1-206ENST00000531405 F8W036 122 aa11.03□□□□□ -0.64
SSSCA1-206ENST00000531405 IFI27P40305 119 aaPredicted RBP11.03□□□□□ -0.64
SSSCA1-206ENST00000531405 PRR4Q16378 134 aa11.03□□□□□ -0.64
SSSCA1-206ENST00000531405 TRBV30A0A0K0K1B3 111 aa11.02□□□□□ -0.65
SSSCA1-206ENST00000531405 NDUFC2-KCTD14E9PQ53 114 aa11.02□□□□□ -0.65
SSSCA1-206ENST00000531405 S100A8P05109 93 aa11.02□□□□□ -0.65
SSSCA1-206ENST00000531405 PPBPP02775 128 aa11.01□□□□□ -0.65
SSSCA1-206ENST00000531405 RAB5AP20339 215 aa11.01□□□□□ -0.65
SSSCA1-206ENST00000531405 ZC2HC1BQ5TFG8 222 aa11.01□□□□□ -0.65
SSSCA1-206ENST00000531405 PYGO1Q9Y3Y4 419 aa11.01□□□□□ -0.65
SSSCA1-206ENST00000531405 ORMDL3Q8N138 153 aa11□□□□□ -0.65
SSSCA1-206ENST00000531405 TMEM141Q96I45 108 aa11□□□□□ -0.65
SSSCA1-206ENST00000531405 PACRGQ96M98 296 aaPredicted RBP11□□□□□ -0.65
SSSCA1-206ENST00000531405 PRELID3AQ96N28 172 aa11□□□□□ -0.65
SSSCA1-206ENST00000531405 TMEM136Q6ZRR5 245 aa10.99□□□□□ -0.65
SSSCA1-206ENST00000531405 RPL13AP40429 203 aaKnown RBP10.98□□□□□ -0.65
SSSCA1-206ENST00000531405 IFITM2Q01629 132 aa10.98□□□□□ -0.65
SSSCA1-206ENST00000531405 TEX43Q6ZNM6 134 aa10.98□□□□□ -0.65
SSSCA1-206ENST00000531405 LINC00469Q8N7U9 141 aa10.98□□□□□ -0.65
SSSCA1-206ENST00000531405 LOC389332A0A1B0GUA5 103 aa10.97□□□□□ -0.65
SSSCA1-206ENST00000531405 PEA15Q15121 130 aa10.97□□□□□ -0.65
SSSCA1-206ENST00000531405 LINC00173Q6ZV60 143 aa10.96□□□□□ -0.65
SSSCA1-206ENST00000531405 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
SSSCA1-206ENST00000531405 ZNF861PO60384 105 aa10.95□□□□□ -0.66
SSSCA1-206ENST00000531405 C2orf88Q9BSF0 95 aa10.95□□□□□ -0.66
SSSCA1-206ENST00000531405 PRSS2P07478 247 aa10.94□□□□□ -0.66
SSSCA1-206ENST00000531405 LINC01561Q8N1V8 128 aa10.94□□□□□ -0.66
SSSCA1-206ENST00000531405 XAGE1AQ9HD64 81 aa10.94□□□□□ -0.66
SSSCA1-206ENST00000531405 CARHSP1Q9Y2V2 147 aaKnown RBP10.94□□□□□ -0.66
SSSCA1-206ENST00000531405 C22orf24Q9Y442 160 aa10.94□□□□□ -0.66
SSSCA1-206ENST00000531405 TSPAN13O95857 204 aa10.93□□□□□ -0.66
SSSCA1-206ENST00000531405 CKS1BP61024 79 aa10.93□□□□□ -0.66
SSSCA1-206ENST00000531405 ATP5L2Q7Z4Y8 100 aa10.93□□□□□ -0.66
SSSCA1-206ENST00000531405 PRSS47A8MTI9 375 aa10.92□□□□□ -0.66
SSSCA1-206ENST00000531405 C2orf66Q6UXQ4 117 aa10.92□□□□□ -0.66
SSSCA1-206ENST00000531405 Q6ZN92 141 aa10.92□□□□□ -0.66
SSSCA1-206ENST00000531405 AMELXQ99217 191 aa10.92□□□□□ -0.66
SSSCA1-206ENST00000531405 MAP1LC3AQ9H492 121 aa10.92□□□□□ -0.66
SSSCA1-206ENST00000531405 CYSLTR1Q9Y271 337 aa10.92□□□□□ -0.66
SSSCA1-206ENST00000531405 C6orf226Q5I0X4 101 aa10.91□□□□□ -0.66
SSSCA1-206ENST00000531405 CTDSP1Q9GZU7 261 aa10.91□□□□□ -0.66
SSSCA1-206ENST00000531405 VCX2Q9H322 139 aa10.91□□□□□ -0.66
SSSCA1-206ENST00000531405 NUPR1O60356 82 aa10.9□□□□□ -0.66
SSSCA1-206ENST00000531405 Q8IZM0 81 aa10.9□□□□□ -0.66
SSSCA1-206ENST00000531405 Q8N8P6 123 aa10.9□□□□□ -0.66
SSSCA1-206ENST00000531405 ALKBH7Q9BT30 221 aaPredicted RBP10.9□□□□□ -0.66
SSSCA1-206ENST00000531405 A0A087X002 238 aa10.89□□□□□ -0.67
SSSCA1-206ENST00000531405 LAMTOR2Q9Y2Q5 125 aa10.89□□□□□ -0.67
SSSCA1-206ENST00000531405 LBHQ53QV2 105 aaPredicted RBP10.88□□□□□ -0.67
SSSCA1-206ENST00000531405 IGIPA6NJ69 53 aa10.87□□□□□ -0.67
SSSCA1-206ENST00000531405 FAM19A3Q7Z5A8 133 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms