RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 U3KQK5 164 aa10.68□□□□□ -0.7
LRRK1-207ENST00000531270 PMAIP1Q13794 54 aa10.67□□□□□ -0.7
LRRK1-207ENST00000531270 WNK1Q9H4A3 2382 aa10.67□□□□□ -0.7
LRRK1-207ENST00000531270 PTPRQQ9UMZ3 2332 aa10.67□□□□□ -0.7
LRRK1-207ENST00000531270 DENND4AQ7Z401 1863 aa10.67□□□□□ -0.7
LRRK1-207ENST00000531270 COX7CP15954 63 aa10.67□□□□□ -0.7
LRRK1-207ENST00000531270 PRR3P79522 188 aaKnown RBP10.67□□□□□ -0.7
LRRK1-207ENST00000531270 FAM208BQ5VWN6 2430 aa10.66□□□□□ -0.7
LRRK1-207ENST00000531270 LINC00574Q9H8X3 128 aa10.66□□□□□ -0.7
LRRK1-207ENST00000531270 NRACQ8N912 160 aa10.66□□□□□ -0.7
LRRK1-207ENST00000531270 Q8IZM0 81 aa10.66□□□□□ -0.7
LRRK1-207ENST00000531270 TRBV10-3A0A0K0K1G6 114 aa10.65□□□□□ -0.7
LRRK1-207ENST00000531270 NTM-AS1Q6ZSK4 140 aa10.65□□□□□ -0.7
LRRK1-207ENST00000531270 C11orf21Q9P2W6 132 aa10.65□□□□□ -0.7
LRRK1-207ENST00000531270 PLA2G1BP04054 148 aaKnown RBP10.64□□□□□ -0.71
LRRK1-207ENST00000531270 LINC00694P0DN24 101 aa10.64□□□□□ -0.71
LRRK1-207ENST00000531270 GAS8-AS1O95177 125 aa10.64□□□□□ -0.71
LRRK1-207ENST00000531270 SBSPONQ8IVN8 264 aa10.64□□□□□ -0.71
LRRK1-207ENST00000531270 PSPHP1O15172 72 aa10.64□□□□□ -0.71
LRRK1-207ENST00000531270 CDC42SE2Q9NRR3 84 aa10.64□□□□□ -0.71
LRRK1-207ENST00000531270 OBSL1O75147 1896 aa10.63□□□□□ -0.71
LRRK1-207ENST00000531270 EDN2P20800 178 aa10.63□□□□□ -0.71
LRRK1-207ENST00000531270 C11orf71Q6IPW1 123 aa10.63□□□□□ -0.71
LRRK1-207ENST00000531270 Q6ZPA2 131 aa10.63□□□□□ -0.71
LRRK1-207ENST00000531270 Q9BRP9 147 aa10.63□□□□□ -0.71
LRRK1-207ENST00000531270 CRIP2P52943 208 aaPredicted RBP10.63□□□□□ -0.71
LRRK1-207ENST00000531270 NCOA6Q14686 2063 aaPredicted RBP10.63□□□□□ -0.71
LRRK1-207ENST00000531270 MRPS36P82909 103 aaKnown RBP10.63□□□□□ -0.71
LRRK1-207ENST00000531270 A0A087WVE0 104 aa10.62□□□□□ -0.71
LRRK1-207ENST00000531270 Q6JHZ5 121 aa10.62□□□□□ -0.71
LRRK1-207ENST00000531270 ZNF295-AS1Q8N0V1 137 aa10.61□□□□□ -0.71
LRRK1-207ENST00000531270 IMUPQ9GZP8 106 aa10.61□□□□□ -0.71
LRRK1-207ENST00000531270 ADAMTS9Q9P2N4 1935 aa10.6□□□□□ -0.71
LRRK1-207ENST00000531270 Q8N814 137 aa10.6□□□□□ -0.71
LRRK1-207ENST00000531270 A0A087WYN8 130 aa10.59□□□□□ -0.71
LRRK1-207ENST00000531270 XGP55808 180 aa10.59□□□□□ -0.71
LRRK1-207ENST00000531270 CRYGAP11844 174 aa10.59□□□□□ -0.71
LRRK1-207ENST00000531270 KLLNB2CW77 178 aa10.59□□□□□ -0.71
LRRK1-207ENST00000531270 Q6ZTC4 211 aa10.59□□□□□ -0.71
LRRK1-207ENST00000531270 SMIM26A0A096LP01 95 aa10.59□□□□□ -0.71
LRRK1-207ENST00000531270 COX6A2Q02221 97 aa10.58□□□□□ -0.72
LRRK1-207ENST00000531270 EGFEM1PQ0D2K5 195 aa10.58□□□□□ -0.72
LRRK1-207ENST00000531270 A0A087WSZ3 146 aa10.58□□□□□ -0.72
LRRK1-207ENST00000531270 H0Y9P7 68 aa10.58□□□□□ -0.72
LRRK1-207ENST00000531270 ZFHX2Q9C0A1 2572 aaPredicted RBP10.58□□□□□ -0.72
LRRK1-207ENST00000531270 EIF4EBP1Q13541 118 aaPredicted RBP10.58□□□□□ -0.72
LRRK1-207ENST00000531270 C1orf134Q5TEV5 83 aa10.58□□□□□ -0.72
LRRK1-207ENST00000531270 C2orf48Q96LS8 159 aa10.57□□□□□ -0.72
LRRK1-207ENST00000531270 TMEM131Q92545 1883 aa10.57□□□□□ -0.72
LRRK1-207ENST00000531270 PLA2G2AP14555 144 aa10.57□□□□□ -0.72
LRRK1-207ENST00000531270 TRAV7A0A075B6U4 112 aa10.57□□□□□ -0.72
LRRK1-207ENST00000531270 POLR2KP53803 58 aaKnown RBP10.57□□□□□ -0.72
LRRK1-207ENST00000531270 C2orf91Q6ZV80 131 aa10.57□□□□□ -0.72
LRRK1-207ENST00000531270 TRBV7-7A0A0K0K1E9 115 aa10.56□□□□□ -0.72
LRRK1-207ENST00000531270 TANC1Q9C0D5 1861 aa10.56□□□□□ -0.72
LRRK1-207ENST00000531270 IGLV4-60A0A075B6I1 120 aa10.56□□□□□ -0.72
LRRK1-207ENST00000531270 LINC00575Q6W349 94 aa10.56□□□□□ -0.72
LRRK1-207ENST00000531270 LINC00337Q8N6G1 96 aa10.56□□□□□ -0.72
LRRK1-207ENST00000531270 LINC00242Q5T6M2 205 aa10.56□□□□□ -0.72
LRRK1-207ENST00000531270 SORL1Q92673 2214 aa10.55□□□□□ -0.72
LRRK1-207ENST00000531270 IGKV2D-30A0A075B6S6 120 aa10.55□□□□□ -0.72
LRRK1-207ENST00000531270 IGKV2-30P06310 120 aa10.55□□□□□ -0.72
LRRK1-207ENST00000531270 IGLV1-40P01703 118 aa10.55□□□□□ -0.72
LRRK1-207ENST00000531270 PRLHP81277 87 aa10.55□□□□□ -0.72
LRRK1-207ENST00000531270 DENND4CQ5VZ89 1909 aa10.55□□□□□ -0.72
LRRK1-207ENST00000531270 HCG22E2RYF7 251 aa10.54□□□□□ -0.72
LRRK1-207ENST00000531270 NOTCH4Q99466 2003 aa10.54□□□□□ -0.72
LRRK1-207ENST00000531270 ANAPC1Q9H1A4 1944 aa10.54□□□□□ -0.72
LRRK1-207ENST00000531270 NUP210Q8TEM1 1887 aaPredicted RBP10.53□□□□□ -0.72
LRRK1-207ENST00000531270 Q8N6K4 173 aa10.53□□□□□ -0.72
LRRK1-207ENST00000531270 Q9UF83 564 aa10.52□□□□□ -0.73
LRRK1-207ENST00000531270 KIF26AQ9ULI4 1882 aaPredicted RBP10.52□□□□□ -0.73
LRRK1-207ENST00000531270 FSTL3O95633 263 aa10.52□□□□□ -0.73
LRRK1-207ENST00000531270 ODF3L2Q3SX64 289 aa10.52□□□□□ -0.73
LRRK1-207ENST00000531270 SMIM1B2RUZ4 78 aa10.52□□□□□ -0.73
LRRK1-207ENST00000531270 AVPP01185 164 aa10.52□□□□□ -0.73
LRRK1-207ENST00000531270 C7orf65Q6ZTY9 151 aa10.51□□□□□ -0.73
LRRK1-207ENST00000531270 Q8N3U1 123 aa10.51□□□□□ -0.73
LRRK1-207ENST00000531270 MED12LQ86YW9 2145 aa10.51□□□□□ -0.73
LRRK1-207ENST00000531270 MUC7Q8TAX7 377 aa10.5□□□□□ -0.73
LRRK1-207ENST00000531270 A8MTW9 85 aa10.5□□□□□ -0.73
LRRK1-207ENST00000531270 KRTAP10-9P60411 292 aa10.49□□□□□ -0.73
LRRK1-207ENST00000531270 CHCHD7Q9BUK0 85 aa10.48□□□□□ -0.73
LRRK1-207ENST00000531270 IGIPA6NJ69 53 aa10.48□□□□□ -0.73
LRRK1-207ENST00000531270 CSDC2Q9Y534 153 aaKnown RBP10.48□□□□□ -0.73
LRRK1-207ENST00000531270 CRIP3Q6Q6R5 217 aa10.48□□□□□ -0.73
LRRK1-207ENST00000531270 FHL2Q14192 279 aa10.48□□□□□ -0.73
LRRK1-207ENST00000531270 ZNF106Q9H2Y7 1883 aaKnown RBP10.47□□□□□ -0.73
LRRK1-207ENST00000531270 LIMD2Q9BT23 127 aa10.47□□□□□ -0.73
LRRK1-207ENST00000531270 PRR14LQ5THK1 2151 aa10.47□□□□□ -0.73
LRRK1-207ENST00000531270 CDSNQ15517 529 aa10.47□□□□□ -0.73
LRRK1-207ENST00000531270 SPACA4Q8TDM5 124 aa10.46□□□□□ -0.73
LRRK1-207ENST00000531270 TANC2Q9HCD6 1990 aa10.46□□□□□ -0.74
LRRK1-207ENST00000531270 ZNF580Q9UK33 172 aa10.46□□□□□ -0.74
LRRK1-207ENST00000531270 TSPEAR-AS2P59090 65 aa10.45□□□□□ -0.74
LRRK1-207ENST00000531270 PLXNB3Q9ULL4 1909 aa10.44□□□□□ -0.74
LRRK1-207ENST00000531270 ADAMTSL4-AS1Q5T5F5 129 aa10.44□□□□□ -0.74
LRRK1-207ENST00000531270 OTOGLQ3ZCN5 2332 aa10.44□□□□□ -0.74
LRRK1-207ENST00000531270 PRRC2AP48634 2157 aaKnown RBP10.44□□□□□ -0.74
LRRK1-207ENST00000531270 MUC6Q6W4X9 2439 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms