RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 PRYO14603 147 aa6.11□□□□□ -1.43
CTNND1-227ENST00000530748 COX6A2Q02221 97 aa6.11□□□□□ -1.43
CTNND1-227ENST00000530748 OXLD1Q5BKU9 147 aa6.11□□□□□ -1.43
CTNND1-227ENST00000530748 FAM30AQ9NZY2 134 aa6.11□□□□□ -1.43
CTNND1-227ENST00000530748 RETNQ9HD89 108 aa6.11□□□□□ -1.43
CTNND1-227ENST00000530748 EGFEM1PQ0D2K5 195 aa6.11□□□□□ -1.43
CTNND1-227ENST00000530748 FHL2Q14192 279 aa6.11□□□□□ -1.43
CTNND1-227ENST00000530748 LINC00242Q5T6M2 205 aa6.11□□□□□ -1.43
CTNND1-227ENST00000530748 A0A0U1RQV1 116 aa6.1□□□□□ -1.43
CTNND1-227ENST00000530748 FAM19A3Q7Z5A8 133 aa6.1□□□□□ -1.43
CTNND1-227ENST00000530748 CADP27708 2225 aa6.1□□□□□ -1.43
CTNND1-227ENST00000530748 RPL28P46779 137 aaKnown RBP6.1□□□□□ -1.43
CTNND1-227ENST00000530748 LINC00337Q8N6G1 96 aa6.1□□□□□ -1.43
CTNND1-227ENST00000530748 SNURFQ9Y675 71 aa6.1□□□□□ -1.43
CTNND1-227ENST00000530748 SMIM1B2RUZ4 78 aa6.1□□□□□ -1.43
CTNND1-227ENST00000530748 KRTAP10-9P60411 292 aa6.1□□□□□ -1.43
CTNND1-227ENST00000530748 ARHGAP21Q5T5U3 1957 aa6.1□□□□□ -1.43
CTNND1-227ENST00000530748 Q8N814 137 aa6.09□□□□□ -1.43
CTNND1-227ENST00000530748 IGLV5-52A0A0A0MRZ9 124 aa6.09□□□□□ -1.43
CTNND1-227ENST00000530748 COX8CQ7Z4L0 72 aa6.09□□□□□ -1.43
CTNND1-227ENST00000530748 RAI1Q7Z5J4 1906 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-227ENST00000530748 UNQ6190/PRO20217Q6UXQ8 127 aa6.08□□□□□ -1.44
CTNND1-227ENST00000530748 URB1-AS1Q96HZ7 61 aa6.08□□□□□ -1.44
CTNND1-227ENST00000530748 CSDC2Q9Y534 153 aaKnown RBP6.07□□□□□ -1.44
CTNND1-227ENST00000530748 USF3Q68DE3 2245 aa6.07□□□□□ -1.44
CTNND1-227ENST00000530748 AMELXQ99217 191 aa6.07□□□□□ -1.44
CTNND1-227ENST00000530748 IGLV4-60A0A075B6I1 120 aa6.07□□□□□ -1.44
CTNND1-227ENST00000530748 COX7CP15954 63 aa6.07□□□□□ -1.44
CTNND1-227ENST00000530748 ROS1P08922 2347 aa6.07□□□□□ -1.44
CTNND1-227ENST00000530748 A0A087WYN8 130 aa6.07□□□□□ -1.44
CTNND1-227ENST00000530748 BEAN1Q3B7T3 259 aa6.07□□□□□ -1.44
CTNND1-227ENST00000530748 LINC01561Q8N1V8 128 aa6.07□□□□□ -1.44
CTNND1-227ENST00000530748 KIAA1549Q9HCM3 1950 aa6.07□□□□□ -1.44
CTNND1-227ENST00000530748 TRBV10-3A0A0K0K1G6 114 aa6.07□□□□□ -1.44
CTNND1-227ENST00000530748 LINC00694P0DN24 101 aa6.06□□□□□ -1.44
CTNND1-227ENST00000530748 C9orf116Q5BN46 136 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-227ENST00000530748 C6orf223Q8N319 242 aa6.06□□□□□ -1.44
CTNND1-227ENST00000530748 RIF1Q5UIP0 2472 aaKnown RBP6.06□□□□□ -1.44
CTNND1-227ENST00000530748 Q8N9L7 120 aa6.06□□□□□ -1.44
CTNND1-227ENST00000530748 TSPEAR-AS2P59090 65 aa6.06□□□□□ -1.44
CTNND1-227ENST00000530748 C1orf134Q5TEV5 83 aa6.06□□□□□ -1.44
CTNND1-227ENST00000530748 PCDH15Q96QU1 1955 aa6.06□□□□□ -1.44
CTNND1-227ENST00000530748 NTM-AS1Q6ZSK4 140 aa6.06□□□□□ -1.44
CTNND1-227ENST00000530748 NHLRC4P0CG21 123 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-227ENST00000530748 ESRGQ1W209 222 aa6.05□□□□□ -1.44
CTNND1-227ENST00000530748 Q6ZTC4 211 aa6.05□□□□□ -1.44
CTNND1-227ENST00000530748 PCNX3Q9H6A9 2034 aa6.05□□□□□ -1.44
CTNND1-227ENST00000530748 DOCK7Q96N67 2140 aa6.05□□□□□ -1.44
CTNND1-227ENST00000530748 LINC00310P59036 64 aa6.05□□□□□ -1.44
CTNND1-227ENST00000530748 Q6Q795 121 aa6.05□□□□□ -1.44
CTNND1-227ENST00000530748 C2orf48Q96LS8 159 aa6.05□□□□□ -1.44
CTNND1-227ENST00000530748 C1orf137Q5JT78 98 aa6.04□□□□□ -1.44
CTNND1-227ENST00000530748 HIVEP2P31629 2446 aa6.04□□□□□ -1.44
CTNND1-227ENST00000530748 MALRD1Q5VYJ5 2156 aa6.04□□□□□ -1.44
CTNND1-227ENST00000530748 GTF3C1Q12789 2109 aa6.04□□□□□ -1.44
CTNND1-227ENST00000530748 Q6ZSN1 163 aa6.04□□□□□ -1.44
CTNND1-227ENST00000530748 MED13Q9UHV7 2174 aa6.04□□□□□ -1.44
CTNND1-227ENST00000530748 CCDC179H3BU77 68 aa6.04□□□□□ -1.44
CTNND1-227ENST00000530748 C1orf195Q5TG92 126 aa6.04□□□□□ -1.44
CTNND1-227ENST00000530748 Q6ZVQ6 151 aa6.04□□□□□ -1.44
CTNND1-227ENST00000530748 TECTAO75443 2155 aa6.04□□□□□ -1.44
CTNND1-227ENST00000530748 PKDREJQ9NTG1 2253 aa6.04□□□□□ -1.44
CTNND1-227ENST00000530748 CIRBP-AS1Q8TBR5 109 aa6.04□□□□□ -1.44
CTNND1-227ENST00000530748 LYPD5Q6UWN5 251 aa6.04□□□□□ -1.44
CTNND1-227ENST00000530748 DOCK10Q96BY6 2186 aa6.03□□□□□ -1.44
CTNND1-227ENST00000530748 A0A1B0GUV1 79 aa6.03□□□□□ -1.44
CTNND1-227ENST00000530748 J3QL48 77 aa6.03□□□□□ -1.44
CTNND1-227ENST00000530748 XGP55808 180 aa6.03□□□□□ -1.44
CTNND1-227ENST00000530748 GPR179Q6PRD1 2367 aa6.03□□□□□ -1.44
CTNND1-227ENST00000530748 TRAV7A0A075B6U4 112 aa6.03□□□□□ -1.44
CTNND1-227ENST00000530748 Q9BRP9 147 aa6.03□□□□□ -1.44
CTNND1-227ENST00000530748 ADAMTSL4-AS1Q5T5F5 129 aa6.02□□□□□ -1.45
CTNND1-227ENST00000530748 A0A1W2PPR1 153 aa6.02□□□□□ -1.45
CTNND1-227ENST00000530748 SHANK1Q9Y566 2161 aa6.02□□□□□ -1.45
CTNND1-227ENST00000530748 PCNX1Q96RV3 2341 aa6.01□□□□□ -1.45
CTNND1-227ENST00000530748 FAM229AH3BQW9 127 aa6.01□□□□□ -1.45
CTNND1-227ENST00000530748 PRR3P79522 188 aaKnown RBP6.01□□□□□ -1.45
CTNND1-227ENST00000530748 LINC01556Q5JQF7 62 aa6.01□□□□□ -1.45
CTNND1-227ENST00000530748 A6NED7 52 aa6.01□□□□□ -1.45
CTNND1-227ENST00000530748 Q8N2B8 174 aa6.01□□□□□ -1.45
CTNND1-227ENST00000530748 LINC01546A6NGU7 62 aa6.01□□□□□ -1.45
CTNND1-227ENST00000530748 IGHV6-1A0A0B4J1U7 121 aa6.01□□□□□ -1.45
CTNND1-227ENST00000530748 MED12LQ86YW9 2145 aa6□□□□□ -1.45
CTNND1-227ENST00000530748 NCOA6Q14686 2063 aaPredicted RBP6□□□□□ -1.45
CTNND1-227ENST00000530748 COL4A2P08572 1712 aa6□□□□□ -1.45
CTNND1-227ENST00000530748 PRR4Q16378 134 aa6□□□□□ -1.45
CTNND1-227ENST00000530748 CELA1Q9UNI1 258 aa5.99□□□□□ -1.45
CTNND1-227ENST00000530748 ZGRF1Q86YA3 2104 aa5.99□□□□□ -1.45
CTNND1-227ENST00000530748 LINC00575Q6W349 94 aa5.98□□□□□ -1.45
CTNND1-227ENST00000530748 X6R8D5 127 aa5.98□□□□□ -1.45
CTNND1-227ENST00000530748 A0A096LNJ9 63 aa5.98□□□□□ -1.45
CTNND1-227ENST00000530748 SPTAN1Q13813 2472 aaKnown RBP5.97□□□□□ -1.45
CTNND1-227ENST00000530748 FHL3Q13643 280 aa5.97□□□□□ -1.45
CTNND1-227ENST00000530748 PTPRQQ9UMZ3 2332 aa5.97□□□□□ -1.45
CTNND1-227ENST00000530748 Q6ZRU5 148 aa5.97□□□□□ -1.45
CTNND1-227ENST00000530748 RETNLBQ9BQ08 111 aa5.97□□□□□ -1.45
CTNND1-227ENST00000530748 LIMD2Q9BT23 127 aa5.97□□□□□ -1.45
CTNND1-227ENST00000530748 NACAE9PAV3 2078 aa5.96□□□□□ -1.46
CTNND1-227ENST00000530748 FAM19A4Q96LR4 140 aa5.96□□□□□ -1.46
CTNND1-227ENST00000530748 WNK2Q9Y3S1 2297 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms