RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 NBEAP1P0C6P0 100 aa-0.64□□□□□ -2.51
NUP98-218ENST00000530516 PIPP12273 146 aaPredicted RBP-0.64□□□□□ -2.51
NUP98-218ENST00000530516 MT1LQ93083 61 aa-0.64□□□□□ -2.51
NUP98-218ENST00000530516 MRPL40Q9NQ50 206 aaKnown RBP-0.64□□□□□ -2.51
NUP98-218ENST00000530516 DISP2A7MBM2 1401 aa-0.64□□□□□ -2.51
NUP98-218ENST00000530516 CASKIN1Q8WXD9 1431 aa-0.64□□□□□ -2.51
NUP98-218ENST00000530516 LOC400499M0QZD8 3231 aa-0.64□□□□□ -2.51
NUP98-218ENST00000530516 CEP350Q5VT06 3117 aa-0.64□□□□□ -2.51
NUP98-218ENST00000530516 MKI67P46013 3256 aaKnown RBP-0.65□□□□□ -2.51
NUP98-218ENST00000530516 DNAJC13O75165 2243 aa-0.65□□□□□ -2.51
NUP98-218ENST00000530516 ARHGEF10O15013 1369 aa-0.65□□□□□ -2.51
NUP98-218ENST00000530516 VCANP13611 3396 aa-0.65□□□□□ -2.51
NUP98-218ENST00000530516 GNG14A0A1W2PPG7 69 aa-0.65□□□□□ -2.51
NUP98-218ENST00000530516 BCE1O60756 84 aa-0.65□□□□□ -2.51
NUP98-218ENST00000530516 NCR2O95944 276 aa-0.65□□□□□ -2.51
NUP98-218ENST00000530516 SMR3BP02814 79 aaPredicted RBP-0.65□□□□□ -2.51
NUP98-218ENST00000530516 MT1FP04733 61 aa-0.65□□□□□ -2.51
NUP98-218ENST00000530516 CBLN1P23435 193 aa-0.65□□□□□ -2.51
NUP98-218ENST00000530516 S100A5P33763 92 aa-0.65□□□□□ -2.51
NUP98-218ENST00000530516 CCL18P55774 89 aa-0.65□□□□□ -2.51
NUP98-218ENST00000530516 UBE2G1P62253 170 aa-0.65□□□□□ -2.51
NUP98-218ENST00000530516 SMIM4Q8WVI0 70 aa-0.65□□□□□ -2.51
NUP98-218ENST00000530516 SELENOSQ9BQE4 189 aa-0.65□□□□□ -2.51
NUP98-218ENST00000530516 PSMG3Q9BT73 122 aaPredicted RBP-0.65□□□□□ -2.51
NUP98-218ENST00000530516 MUC3AQ02505 3323 aa-0.65□□□□□ -2.51
NUP98-218ENST00000530516 BICRAQ9NZM4 1560 aa-0.66□□□□□ -2.51
NUP98-218ENST00000530516 WDR7Q9Y4E6 1490 aa-0.66□□□□□ -2.51
NUP98-218ENST00000530516 FXYD6-FXYD2A0A087WZ82 144 aa-0.66□□□□□ -2.52
NUP98-218ENST00000530516 IL5P05113 134 aa-0.66□□□□□ -2.52
NUP98-218ENST00000530516 CCL8P80075 99 aa-0.66□□□□□ -2.52
NUP98-218ENST00000530516 HAMPP81172 84 aa-0.66□□□□□ -2.52
NUP98-218ENST00000530516 HIST1H1AQ02539 215 aaPredicted RBP-0.66□□□□□ -2.52
NUP98-218ENST00000530516 PIGYQ3MUY2 71 aa-0.66□□□□□ -2.52
NUP98-218ENST00000530516 Q6ZUT4 128 aa-0.66□□□□□ -2.52
NUP98-218ENST00000530516 LINC00312Q9Y6C7 94 aa-0.66□□□□□ -2.52
NUP98-218ENST00000530516 PRG4Q92954 1404 aaPredicted RBP-0.66□□□□□ -2.52
NUP98-218ENST00000530516 MRC1P22897 1456 aa-0.67□□□□□ -2.52
NUP98-218ENST00000530516 FRYLO94915 3013 aa-0.67□□□□□ -2.52
NUP98-218ENST00000530516 TRBV6-1A0A0K0K1D8 114 aa-0.67□□□□□ -2.52
NUP98-218ENST00000530516 FAM236AA0A1B0GUQ0 79 aa-0.67□□□□□ -2.52
NUP98-218ENST00000530516 FAM236BA0A1B0GV22 79 aa-0.67□□□□□ -2.52
NUP98-218ENST00000530516 I3L2K1 104 aa-0.67□□□□□ -2.52
NUP98-218ENST00000530516 M0R129 80 aa-0.67□□□□□ -2.52
NUP98-218ENST00000530516 M0R2T5 61 aa-0.67□□□□□ -2.52
NUP98-218ENST00000530516 TNFP01375 233 aa-0.67□□□□□ -2.52
NUP98-218ENST00000530516 IGLC6P0CF74 106 aa-0.67□□□□□ -2.52
NUP98-218ENST00000530516 SCIMPQ6UWF3 145 aa-0.67□□□□□ -2.52
NUP98-218ENST00000530516 SPTSSBQ8NFR3 76 aa-0.67□□□□□ -2.52
NUP98-218ENST00000530516 R4GMQ9 66 aa-0.67□□□□□ -2.52
NUP98-218ENST00000530516 SZT2Q5T011 3432 aa-0.67□□□□□ -2.52
NUP98-218ENST00000530516 MYH7P12883 1935 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 COL4A6Q14031 1691 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 LOC730098B7Z3J9 87 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 J3QR89 54 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 PITX3O75364 302 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 NDUFB6O95139 128 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 TSPAN19P0C672 248 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 DEFB1P60022 68 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 RRAS2P62070 204 aaPredicted RBP-0.68□□□□□ -2.52
NUP98-218ENST00000530516 ALX1Q15699 326 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 SPAG11AQ6PDA7 123 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 KRTAP8-1Q8IUC2 63 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 ARAP2Q8WZ64 1704 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 SPTSSAQ969W0 71 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 AIF1LQ9BQI0 150 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 FMN2Q9NZ56 1722 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 GSKIPQ9P0R6 139 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 IFT140Q96RY7 1462 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 USP34Q70CQ2 3546 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 PSME4Q14997 1843 aa-0.68□□□□□ -2.52
NUP98-218ENST00000530516 MYOM3Q5VTT5 1437 aa-0.69□□□□□ -2.52
NUP98-218ENST00000530516 SNCGO76070 127 aa-0.69□□□□□ -2.52
NUP98-218ENST00000530516 PPP1R17O96001 155 aa-0.69□□□□□ -2.52
NUP98-218ENST00000530516 SCGB1A1P11684 91 aa-0.69□□□□□ -2.52
NUP98-218ENST00000530516 COX17Q14061 63 aa-0.69□□□□□ -2.52
NUP98-218ENST00000530516 DEFB112Q30KQ8 113 aa-0.69□□□□□ -2.52
NUP98-218ENST00000530516 AGPAT4-IT1Q9H0P7 198 aa-0.69□□□□□ -2.52
NUP98-218ENST00000530516 ZNF518AQ6AHZ1 1483 aa-0.69□□□□□ -2.52
NUP98-218ENST00000530516 CEP152O94986 1710 aa-0.69□□□□□ -2.52
NUP98-218ENST00000530516 CDC42BPGQ6DT37 1551 aa-0.7□□□□□ -2.52
NUP98-218ENST00000530516 FHAD1B1AJZ9 1412 aa-0.7□□□□□ -2.52
NUP98-218ENST00000530516 SMG6Q86US8 1419 aaKnown RBP-0.7□□□□□ -2.52
NUP98-218ENST00000530516 BTAF1O14981 1849 aa-0.7□□□□□ -2.52
NUP98-218ENST00000530516 GOLGA4Q13439 2230 aaKnown RBP-0.7□□□□□ -2.52
NUP98-218ENST00000530516 SPAARA0A1B0GVQ0 90 aa-0.7□□□□□ -2.52
NUP98-218ENST00000530516 K7EP34 96 aa-0.7□□□□□ -2.52
NUP98-218ENST00000530516 M0R135 149 aa-0.7□□□□□ -2.52
NUP98-218ENST00000530516 SIX6O95475 246 aa-0.7□□□□□ -2.52
NUP98-218ENST00000530516 NEFHP12036 1026 aa-0.7□□□□□ -2.52
NUP98-218ENST00000530516 COX6B1P14854 86 aa-0.7□□□□□ -2.52
NUP98-218ENST00000530516 SEC11CQ9BY50 192 aa-0.7□□□□□ -2.52
NUP98-218ENST00000530516 CFAP47Q6ZTR5 3102 aa-0.7□□□□□ -2.52
NUP98-218ENST00000530516 KNDC1Q76NI1 1749 aa-0.7□□□□□ -2.52
NUP98-218ENST00000530516 RAPGEF6Q8TEU7 1601 aa-0.71□□□□□ -2.52
NUP98-218ENST00000530516 TROQ12816 1431 aaPredicted RBP-0.71□□□□□ -2.52
NUP98-218ENST00000530516 RIMS1Q86UR5 1692 aaKnown RBP-0.71□□□□□ -2.52
NUP98-218ENST00000530516 CTXND1A0A1B0GTU2 59 aa-0.71□□□□□ -2.52
NUP98-218ENST00000530516 ASIPP42127 132 aa-0.71□□□□□ -2.52
NUP98-218ENST00000530516 GUCA1AP43080 201 aaPredicted RBP-0.71□□□□□ -2.52
NUP98-218ENST00000530516 S100A7L2Q5SY68 101 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms