RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 AQP10Q96PS8 301 aa3.56□□□□□ -1.84
SVIP-204ENST00000530199 A8MWL6 223 aa3.55□□□□□ -1.84
SVIP-204ENST00000530199 CD164Q04900 197 aa3.55□□□□□ -1.84
SVIP-204ENST00000530199 FAM74A4Q5TZK3 123 aa3.55□□□□□ -1.84
SVIP-204ENST00000530199 TMEM14EPQ6UXP3 125 aa3.55□□□□□ -1.84
SVIP-204ENST00000530199 ZFP82Q8N141 532 aa3.55□□□□□ -1.84
SVIP-204ENST00000530199 SMIM8Q96KF7 97 aa3.55□□□□□ -1.84
SVIP-204ENST00000530199 GGACTQ9BVM4 153 aa3.55□□□□□ -1.84
SVIP-204ENST00000530199 MED28Q9H204 178 aa3.55□□□□□ -1.84
SVIP-204ENST00000530199 IGHV1-58A0A0C4DH39 117 aa3.54□□□□□ -1.84
SVIP-204ENST00000530199 TRBV6-1A0A0K0K1D8 114 aa3.54□□□□□ -1.84
SVIP-204ENST00000530199 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.54□□□□□ -1.84
SVIP-204ENST00000530199 APOMO95445 188 aa3.54□□□□□ -1.84
SVIP-204ENST00000530199 BCL2P10415 239 aa3.54□□□□□ -1.84
SVIP-204ENST00000530199 NTF3P20783 257 aa3.54□□□□□ -1.84
SVIP-204ENST00000530199 SULT1A2P50226 295 aa3.54□□□□□ -1.84
SVIP-204ENST00000530199 MEF2BQ02080 365 aaPredicted RBP3.54□□□□□ -1.84
SVIP-204ENST00000530199 COX6B2Q6YFQ2 88 aa3.54□□□□□ -1.84
SVIP-204ENST00000530199 ST20-AS1Q8NBB2 130 aa3.54□□□□□ -1.84
SVIP-204ENST00000530199 ORAOV1Q8WV07 137 aa3.54□□□□□ -1.84
SVIP-204ENST00000530199 LINC00526Q96FQ7 95 aa3.54□□□□□ -1.84
SVIP-204ENST00000530199 SFRP2Q96HF1 295 aa3.54□□□□□ -1.84
SVIP-204ENST00000530199 DERL1Q9BUN8 251 aa3.54□□□□□ -1.84
SVIP-204ENST00000530199 MRPS26Q9BYN8 205 aaKnown RBP3.54□□□□□ -1.84
SVIP-204ENST00000530199 IL36BQ9NZH7 164 aa3.54□□□□□ -1.84
SVIP-204ENST00000530199 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
SVIP-204ENST00000530199 IGHV1-24A0A0C4DH33 117 aa3.53□□□□□ -1.84
SVIP-204ENST00000530199 ZNF80P51504 273 aaPredicted RBP3.53□□□□□ -1.84
SVIP-204ENST00000530199 FAM229BQ4G0N7 80 aa3.53□□□□□ -1.84
SVIP-204ENST00000530199 MIC13Q5XKP0 118 aa3.53□□□□□ -1.84
SVIP-204ENST00000530199 SNX29P2Q8IUI4 249 aa3.53□□□□□ -1.84
SVIP-204ENST00000530199 NUP35Q8NFH5 326 aa3.53□□□□□ -1.84
SVIP-204ENST00000530199 FAM167A-AS1Q96KT0 104 aa3.53□□□□□ -1.84
SVIP-204ENST00000530199 SND1-IT1Q9HBX3 110 aa3.53□□□□□ -1.84
SVIP-204ENST00000530199 SPANXB1Q9NS25 103 aaPredicted RBP3.53□□□□□ -1.84
SVIP-204ENST00000530199 PSENENQ9NZ42 101 aa3.53□□□□□ -1.84
SVIP-204ENST00000530199 OR5AC2Q9NZP5 309 aa3.53□□□□□ -1.84
SVIP-204ENST00000530199 OR7C2O60412 319 aa3.52□□□□□ -1.85
SVIP-204ENST00000530199 ATP6V1G2O95670 118 aa3.52□□□□□ -1.85
SVIP-204ENST00000530199 METTL15P1P0C7V9 234 aa3.52□□□□□ -1.85
SVIP-204ENST00000530199 PVALBP20472 110 aaPredicted RBP3.52□□□□□ -1.85
SVIP-204ENST00000530199 S100A4P26447 101 aaKnown RBP3.52□□□□□ -1.85
SVIP-204ENST00000530199 G0S2P27469 103 aa3.52□□□□□ -1.85
SVIP-204ENST00000530199 RAB4BP61018 213 aa3.52□□□□□ -1.85
SVIP-204ENST00000530199 SPAG11AQ6PDA7 123 aa3.52□□□□□ -1.85
SVIP-204ENST00000530199 PRNTQ86SH4 94 aa3.52□□□□□ -1.85
SVIP-204ENST00000530199 DAND5Q8N907 189 aa3.52□□□□□ -1.85
SVIP-204ENST00000530199 TMEM229BQ8NBD8 167 aa3.52□□□□□ -1.85
SVIP-204ENST00000530199 FXYD5Q96DB9 178 aa3.52□□□□□ -1.85
SVIP-204ENST00000530199 LYRM2Q9NU23 88 aaPredicted RBP3.52□□□□□ -1.85
SVIP-204ENST00000530199 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
SVIP-204ENST00000530199 SMIM31A0A1B0GVY4 71 aa3.51□□□□□ -1.85
SVIP-204ENST00000530199 A8MUU9 505 aa3.51□□□□□ -1.85
SVIP-204ENST00000530199 TMEM238C9JI98 176 aa3.51□□□□□ -1.85
SVIP-204ENST00000530199 RANP62826 216 aaKnown RBP3.51□□□□□ -1.85
SVIP-204ENST00000530199 UBE2BP63146 152 aa3.51□□□□□ -1.85
SVIP-204ENST00000530199 PCOTHQ58A44 107 aa3.51□□□□□ -1.85
SVIP-204ENST00000530199 DNLZQ5SXM8 178 aa3.51□□□□□ -1.85
SVIP-204ENST00000530199 FAM231DQ6ZW35 169 aa3.51□□□□□ -1.85
SVIP-204ENST00000530199 MIR7-3HGQ8N6C7 128 aa3.51□□□□□ -1.85
SVIP-204ENST00000530199 DEDD2Q8WXF8 326 aa3.51□□□□□ -1.85
SVIP-204ENST00000530199 SSNA1O43805 119 aa3.5□□□□□ -1.85
SVIP-204ENST00000530199 NUPR1O60356 82 aa3.5□□□□□ -1.85
SVIP-204ENST00000530199 SLC25A34Q6PIV7 304 aa3.5□□□□□ -1.85
SVIP-204ENST00000530199 OR5C1Q8NGR4 320 aa3.5□□□□□ -1.85
SVIP-204ENST00000530199 IGKV2D-26A0A0A0MRZ7 120 aa3.49□□□□□ -1.85
SVIP-204ENST00000530199 C19orf71A6NCJ1 209 aa3.49□□□□□ -1.85
SVIP-204ENST00000530199 RPL28P46779 137 aaKnown RBP3.49□□□□□ -1.85
SVIP-204ENST00000530199 TAS2R30P59541 319 aa3.49□□□□□ -1.85
SVIP-204ENST00000530199 AP3S1Q92572 193 aa3.49□□□□□ -1.85
SVIP-204ENST00000530199 PRRT1Q99946 306 aa3.49□□□□□ -1.85
SVIP-204ENST00000530199 NMES1Q9C002 83 aa3.49□□□□□ -1.85
SVIP-204ENST00000530199 LOC389332A0A1B0GUA5 103 aa3.48□□□□□ -1.85
SVIP-204ENST00000530199 LOC105371267A0A1B0GV96 52 aa3.48□□□□□ -1.85
SVIP-204ENST00000530199 TINCRA0A1B0GVN0 87 aa3.48□□□□□ -1.85
SVIP-204ENST00000530199 DISC1C4P0D8 188 aa3.48□□□□□ -1.85
SVIP-204ENST00000530199 ARMS2P0C7Q2 107 aa3.48□□□□□ -1.85
SVIP-204ENST00000530199 ESDP10768 282 aa3.48□□□□□ -1.85
SVIP-204ENST00000530199 TGFBR1P36897 503 aa3.48□□□□□ -1.85
SVIP-204ENST00000530199 GABARAPL2P60520 117 aa3.48□□□□□ -1.85
SVIP-204ENST00000530199 GOLT1AQ6ZVE7 132 aa3.48□□□□□ -1.85
SVIP-204ENST00000530199 FAM19A5Q7Z5A7 132 aaPredicted RBP3.48□□□□□ -1.85
SVIP-204ENST00000530199 IGKV3OR2-268A0A0C4DH90 116 aa3.47□□□□□ -1.85
SVIP-204ENST00000530199 H3BVH4 76 aa3.47□□□□□ -1.85
SVIP-204ENST00000530199 SSSCA1O60232 199 aa3.47□□□□□ -1.85
SVIP-204ENST00000530199 MT2AP02795 61 aa3.47□□□□□ -1.85
SVIP-204ENST00000530199 FAM104BQ5XKR9 115 aa3.47□□□□□ -1.85
SVIP-204ENST00000530199 MIR17HGQ75NE6 70 aa3.47□□□□□ -1.85
SVIP-204ENST00000530199 CLVS1Q8IUQ0 354 aaPredicted RBP3.47□□□□□ -1.85
SVIP-204ENST00000530199 CMTM2Q8TAZ6 248 aa3.47□□□□□ -1.85
SVIP-204ENST00000530199 MRAP2Q96G30 205 aa3.47□□□□□ -1.85
SVIP-204ENST00000530199 OTORQ9NRC9 128 aa3.47□□□□□ -1.85
SVIP-204ENST00000530199 RSL24D1Q9UHA3 163 aaKnown RBP3.47□□□□□ -1.85
SVIP-204ENST00000530199 UBE2D4Q9Y2X8 147 aa3.47□□□□□ -1.85
SVIP-204ENST00000530199 C9JQL5 133 aa3.46□□□□□ -1.86
SVIP-204ENST00000530199 SSBP1Q04837 148 aaKnown RBP3.46□□□□□ -1.86
SVIP-204ENST00000530199 ZNF56Q15929 161 aa3.46□□□□□ -1.86
SVIP-204ENST00000530199 FAM74A1Q5RGS3 127 aa3.46□□□□□ -1.86
SVIP-204ENST00000530199 OR5A1Q8NGJ0 315 aa3.46□□□□□ -1.86
SVIP-204ENST00000530199 HYLS1Q96M11 299 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms