RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 IGIPA6NJ69 53 aa5.6□□□□□ -1.51
CTNND1-223ENST00000529986 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.6□□□□□ -1.51
CTNND1-223ENST00000529986 LINC00482Q8N8I6 264 aa5.6□□□□□ -1.51
CTNND1-223ENST00000529986 K7ERS5 55 aa5.59□□□□□ -1.51
CTNND1-223ENST00000529986 Q8N9L7 120 aa5.59□□□□□ -1.51
CTNND1-223ENST00000529986 EP400Q96L91 3159 aa5.59□□□□□ -1.51
CTNND1-223ENST00000529986 PRR3P79522 188 aaKnown RBP5.59□□□□□ -1.51
CTNND1-223ENST00000529986 SHISA2Q6UWI4 295 aa5.59□□□□□ -1.51
CTNND1-223ENST00000529986 NTM-AS1Q6ZSK4 140 aa5.59□□□□□ -1.51
CTNND1-223ENST00000529986 UBE2D3P61077 147 aa5.59□□□□□ -1.51
CTNND1-223ENST00000529986 UBE2D2P62837 147 aa5.59□□□□□ -1.51
CTNND1-223ENST00000529986 SONP18583 2426 aaKnown RBP5.59□□□□□ -1.51
CTNND1-223ENST00000529986 IGLV4-69A0A075B6H9 119 aa5.59□□□□□ -1.51
CTNND1-223ENST00000529986 LINC00959A0A1B0GUT2 108 aa5.59□□□□□ -1.51
CTNND1-223ENST00000529986 LY6LH3BQJ8 138 aa5.59□□□□□ -1.51
CTNND1-223ENST00000529986 ADAMTSL4-AS1Q5T5F5 129 aa5.59□□□□□ -1.51
CTNND1-223ENST00000529986 Q8NA96 180 aa5.59□□□□□ -1.51
CTNND1-223ENST00000529986 DNAJC9-AS1A6NH13 148 aa5.58□□□□□ -1.52
CTNND1-223ENST00000529986 SYCNQ0VAF6 134 aa5.58□□□□□ -1.52
CTNND1-223ENST00000529986 C11orf45Q8TAV5 145 aa5.58□□□□□ -1.52
CTNND1-223ENST00000529986 WFDC10AQ9H1F0 79 aa5.58□□□□□ -1.52
CTNND1-223ENST00000529986 TRBV6-4A0A1B0GX49 114 aa5.58□□□□□ -1.52
CTNND1-223ENST00000529986 ANKHD1Q8IWZ3 2542 aaKnown RBP5.58□□□□□ -1.52
CTNND1-223ENST00000529986 A0A096LNJ9 63 aa5.57□□□□□ -1.52
CTNND1-223ENST00000529986 LINC00208Q96KT6 92 aa5.57□□□□□ -1.52
CTNND1-223ENST00000529986 TNFRSF13BO14836 293 aaPredicted RBP5.57□□□□□ -1.52
CTNND1-223ENST00000529986 ZNF73O43830 326 aaPredicted RBP5.57□□□□□ -1.52
CTNND1-223ENST00000529986 CDIP1Q9H305 208 aa5.57□□□□□ -1.52
CTNND1-223ENST00000529986 TECTAO75443 2155 aa5.57□□□□□ -1.52
CTNND1-223ENST00000529986 C9orf116Q5BN46 136 aaPredicted RBP5.57□□□□□ -1.52
CTNND1-223ENST00000529986 NOTCH2Q04721 2471 aa5.57□□□□□ -1.52
CTNND1-223ENST00000529986 HILS1P60008 231 aa5.57□□□□□ -1.52
CTNND1-223ENST00000529986 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
CTNND1-223ENST00000529986 COX6A2Q02221 97 aa5.57□□□□□ -1.52
CTNND1-223ENST00000529986 CD164L2Q6UWJ8 174 aa5.57□□□□□ -1.52
CTNND1-223ENST00000529986 FSTL3O95633 263 aa5.57□□□□□ -1.52
CTNND1-223ENST00000529986 OTOGLQ3ZCN5 2332 aa5.57□□□□□ -1.52
CTNND1-223ENST00000529986 ZNF843Q8N446 348 aa5.57□□□□□ -1.52
CTNND1-223ENST00000529986 Q8N3U1 123 aa5.56□□□□□ -1.52
CTNND1-223ENST00000529986 KLLNB2CW77 178 aa5.56□□□□□ -1.52
CTNND1-223ENST00000529986 M0R378 163 aa5.56□□□□□ -1.52
CTNND1-223ENST00000529986 LINC00242Q5T6M2 205 aa5.56□□□□□ -1.52
CTNND1-223ENST00000529986 COL5A1P20908 1838 aaPredicted RBP5.56□□□□□ -1.52
CTNND1-223ENST00000529986 PRYO14603 147 aa5.56□□□□□ -1.52
CTNND1-223ENST00000529986 EDN2P20800 178 aa5.56□□□□□ -1.52
CTNND1-223ENST00000529986 BEAN1Q3B7T3 259 aa5.56□□□□□ -1.52
CTNND1-223ENST00000529986 C18orf65Q6ZTR6 163 aa5.56□□□□□ -1.52
CTNND1-223ENST00000529986 Q8N814 137 aa5.55□□□□□ -1.52
CTNND1-223ENST00000529986 CNFNQ9BYD5 112 aa5.55□□□□□ -1.52
CTNND1-223ENST00000529986 CDC42SE2Q9NRR3 84 aa5.55□□□□□ -1.52
CTNND1-223ENST00000529986 DEFB131BA0A096LNP1 70 aa5.55□□□□□ -1.52
CTNND1-223ENST00000529986 C19orf84I3L1E1 186 aa5.55□□□□□ -1.52
CTNND1-223ENST00000529986 IGLV9-49A0A0B4J1Y8 123 aa5.55□□□□□ -1.52
CTNND1-223ENST00000529986 SMIM1B2RUZ4 78 aa5.54□□□□□ -1.52
CTNND1-223ENST00000529986 ACACBO00763 2458 aa5.54□□□□□ -1.52
CTNND1-223ENST00000529986 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.54□□□□□ -1.52
CTNND1-223ENST00000529986 UNQ6190/PRO20217Q6UXQ8 127 aa5.54□□□□□ -1.52
CTNND1-223ENST00000529986 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.54□□□□□ -1.52
CTNND1-223ENST00000529986 LINC00846Q9NV44 126 aa5.54□□□□□ -1.52
CTNND1-223ENST00000529986 DHRS4-AS1Q9P1J3 65 aa5.54□□□□□ -1.52
CTNND1-223ENST00000529986 CYSRT1A8MQ03 144 aa5.53□□□□□ -1.52
CTNND1-223ENST00000529986 RPL28P46779 137 aaKnown RBP5.53□□□□□ -1.52
CTNND1-223ENST00000529986 PCOTHQ58A44 107 aa5.53□□□□□ -1.52
CTNND1-223ENST00000529986 NAV3Q8IVL0 2385 aa5.53□□□□□ -1.52
CTNND1-223ENST00000529986 Q6YL49 198 aa5.53□□□□□ -1.52
CTNND1-223ENST00000529986 TRBV7-7A0A0K0K1E9 115 aa5.53□□□□□ -1.52
CTNND1-223ENST00000529986 CACNA1AO00555 2505 aa5.53□□□□□ -1.52
CTNND1-223ENST00000529986 HIVEP2P31629 2446 aa5.52□□□□□ -1.53
CTNND1-223ENST00000529986 TRBV7-6A0A0J9YX20 115 aa5.52□□□□□ -1.53
CTNND1-223ENST00000529986 TRBV10-3A0A0K0K1G6 114 aa5.52□□□□□ -1.53
CTNND1-223ENST00000529986 C4orf26Q17RF5 130 aa5.52□□□□□ -1.53
CTNND1-223ENST00000529986 DEFB116Q30KQ4 102 aa5.52□□□□□ -1.53
CTNND1-223ENST00000529986 CUL9Q8IWT3 2517 aa5.52□□□□□ -1.53
CTNND1-223ENST00000529986 LINC01547P58512 204 aaPredicted RBP5.52□□□□□ -1.53
CTNND1-223ENST00000529986 ATG2AQ2TAZ0 1938 aa5.52□□□□□ -1.53
CTNND1-223ENST00000529986 Q8IZM0 81 aa5.52□□□□□ -1.53
CTNND1-223ENST00000529986 A8MTW9 85 aa5.51□□□□□ -1.53
CTNND1-223ENST00000529986 C14orf177Q52M58 125 aa5.51□□□□□ -1.53
CTNND1-223ENST00000529986 CHCHD7Q9BUK0 85 aa5.51□□□□□ -1.53
CTNND1-223ENST00000529986 EML5Q05BV3 1969 aa5.51□□□□□ -1.53
CTNND1-223ENST00000529986 MYO18BQ8IUG5 2567 aa5.51□□□□□ -1.53
CTNND1-223ENST00000529986 Q8N6K4 173 aa5.51□□□□□ -1.53
CTNND1-223ENST00000529986 KIR2DL5BQ8NHK3 375 aa5.51□□□□□ -1.53
CTNND1-223ENST00000529986 IGLV4-60A0A075B6I1 120 aa5.51□□□□□ -1.53
CTNND1-223ENST00000529986 COX17Q14061 63 aa5.51□□□□□ -1.53
CTNND1-223ENST00000529986 ESRGQ1W209 222 aa5.51□□□□□ -1.53
CTNND1-223ENST00000529986 C1orf137Q5JT78 98 aa5.51□□□□□ -1.53
CTNND1-223ENST00000529986 LINC00575Q6W349 94 aa5.51□□□□□ -1.53
CTNND1-223ENST00000529986 IGLV2-18A0A075B6J9 118 aa5.5□□□□□ -1.53
CTNND1-223ENST00000529986 TMEM254Q8TBM7 123 aa5.5□□□□□ -1.53
CTNND1-223ENST00000529986 Q9UF83 564 aa5.5□□□□□ -1.53
CTNND1-223ENST00000529986 RETNLBQ9BQ08 111 aa5.5□□□□□ -1.53
CTNND1-223ENST00000529986 DOPEY1Q5JWR5 2465 aa5.5□□□□□ -1.53
CTNND1-223ENST00000529986 PSMG3-AS1Q96PY0 264 aa5.5□□□□□ -1.53
CTNND1-223ENST00000529986 PRRC2AP48634 2157 aaKnown RBP5.5□□□□□ -1.53
CTNND1-223ENST00000529986 GOLGB1Q14789 3259 aaKnown RBP5.49□□□□□ -1.53
CTNND1-223ENST00000529986 SMCPP49901 116 aaPredicted RBP5.49□□□□□ -1.53
CTNND1-223ENST00000529986 HIVEP3Q5T1R4 2406 aa5.49□□□□□ -1.53
CTNND1-223ENST00000529986 KPRPQ5T749 579 aaPredicted RBP5.49□□□□□ -1.53
CTNND1-223ENST00000529986 Q6ZVQ6 151 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms