RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 IFITM10A6NMD0 228 aa8.16□□□□□ -1.1
CCDC90B-216ENST00000529856 COX7A2LO14548 114 aa8.16□□□□□ -1.1
CCDC90B-216ENST00000529856 SMR3BP02814 79 aaPredicted RBP8.16□□□□□ -1.1
CCDC90B-216ENST00000529856 NPSP0C0P6 89 aa8.16□□□□□ -1.1
CCDC90B-216ENST00000529856 YPEL4Q96NS1 127 aa8.16□□□□□ -1.1
CCDC90B-216ENST00000529856 IGHV3-64A0A075B6Q5 118 aa8.15□□□□□ -1.1
CCDC90B-216ENST00000529856 C5orf38Q86SI9 138 aa8.15□□□□□ -1.1
CCDC90B-216ENST00000529856 TOMM6Q96B49 74 aa8.15□□□□□ -1.1
CCDC90B-216ENST00000529856 CHAC1Q9BUX1 264 aa8.15□□□□□ -1.1
CCDC90B-216ENST00000529856 IGHV3OR16-9A0A0B4J2B5 98 aa8.14□□□□□ -1.11
CCDC90B-216ENST00000529856 EPM2AB3EWF7 344 aa8.14□□□□□ -1.11
CCDC90B-216ENST00000529856 MALP21145 153 aa8.14□□□□□ -1.11
CCDC90B-216ENST00000529856 TEX43Q6ZNM6 134 aa8.14□□□□□ -1.11
CCDC90B-216ENST00000529856 SCXQ7RTU7 201 aa8.14□□□□□ -1.11
CCDC90B-216ENST00000529856 AMELXQ99217 191 aa8.14□□□□□ -1.11
CCDC90B-216ENST00000529856 ABCA13Q86UQ4 5058 aa8.13□□□□□ -1.11
CCDC90B-216ENST00000529856 ZNF561-AS1K7EIQ3 104 aa8.13□□□□□ -1.11
CCDC90B-216ENST00000529856 LINC00242Q5T6M2 205 aa8.13□□□□□ -1.11
CCDC90B-216ENST00000529856 Q6ZN92 141 aa8.13□□□□□ -1.11
CCDC90B-216ENST00000529856 FA2HQ7L5A8 372 aa8.13□□□□□ -1.11
CCDC90B-216ENST00000529856 CIRBP-AS1Q8TBR5 109 aa8.13□□□□□ -1.11
CCDC90B-216ENST00000529856 LINC00526Q96FQ7 95 aa8.13□□□□□ -1.11
CCDC90B-216ENST00000529856 TIMM17AQ99595 171 aa8.13□□□□□ -1.11
CCDC90B-216ENST00000529856 VCX2Q9H322 139 aa8.13□□□□□ -1.11
CCDC90B-216ENST00000529856 PCLOQ9Y6V0 5065 aa8.12□□□□□ -1.11
CCDC90B-216ENST00000529856 APOMO95445 188 aa8.12□□□□□ -1.11
CCDC90B-216ENST00000529856 UBE2D1P51668 147 aa8.12□□□□□ -1.11
CCDC90B-216ENST00000529856 ZC2HC1BQ5TFG8 222 aa8.12□□□□□ -1.11
CCDC90B-216ENST00000529856 LINC00173Q6ZV60 143 aa8.12□□□□□ -1.11
CCDC90B-216ENST00000529856 C2orf88Q9BSF0 95 aa8.12□□□□□ -1.11
CCDC90B-216ENST00000529856 SMCO4Q9NRQ5 59 aa8.12□□□□□ -1.11
CCDC90B-216ENST00000529856 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.12□□□□□ -1.11
CCDC90B-216ENST00000529856 IGLV4-69A0A075B6H9 119 aa8.11□□□□□ -1.11
CCDC90B-216ENST00000529856 LINC01549A6NIU2 74 aa8.11□□□□□ -1.11
CCDC90B-216ENST00000529856 FAM229AH3BQW9 127 aa8.11□□□□□ -1.11
CCDC90B-216ENST00000529856 PANO1I0J062 215 aa8.11□□□□□ -1.11
CCDC90B-216ENST00000529856 COX6A2Q02221 97 aa8.11□□□□□ -1.11
CCDC90B-216ENST00000529856 CIRBPQ14011 172 aaKnown RBP8.11□□□□□ -1.11
CCDC90B-216ENST00000529856 PAPPA-AS1Q5QFB9 102 aa8.11□□□□□ -1.11
CCDC90B-216ENST00000529856 Q5VSD8 79 aa8.11□□□□□ -1.11
CCDC90B-216ENST00000529856 ERASQ7Z444 233 aa8.11□□□□□ -1.11
CCDC90B-216ENST00000529856 CBLN2Q8IUK8 224 aa8.11□□□□□ -1.11
CCDC90B-216ENST00000529856 C18orf32Q8TCD1 76 aa8.11□□□□□ -1.11
CCDC90B-216ENST00000529856 SCGB3A1Q96QR1 104 aa8.11□□□□□ -1.11
CCDC90B-216ENST00000529856 SYCNQ0VAF6 134 aa8.1□□□□□ -1.11
CCDC90B-216ENST00000529856 URB1-AS1Q96HZ7 61 aa8.1□□□□□ -1.11
CCDC90B-216ENST00000529856 A0A087WZ39 114 aa8.09□□□□□ -1.11
CCDC90B-216ENST00000529856 LINC00614P0C842 121 aa8.09□□□□□ -1.11
CCDC90B-216ENST00000529856 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
CCDC90B-216ENST00000529856 OR10D4PQ8NGN7 298 aa8.09□□□□□ -1.11
CCDC90B-216ENST00000529856 C2orf48Q96LS8 159 aa8.09□□□□□ -1.11
CCDC90B-216ENST00000529856 CARD19Q96LW7 228 aa8.09□□□□□ -1.11
CCDC90B-216ENST00000529856 SPAG11BQ08648 103 aa8.08□□□□□ -1.12
CCDC90B-216ENST00000529856 ORAOV1Q8WV07 137 aa8.08□□□□□ -1.12
CCDC90B-216ENST00000529856 VPS13BQ7Z7G8 4022 aa8.08□□□□□ -1.12
CCDC90B-216ENST00000529856 A0A096LNJ9 63 aa8.07□□□□□ -1.12
CCDC90B-216ENST00000529856 CHTF8P0CG12 524 aa8.07□□□□□ -1.12
CCDC90B-216ENST00000529856 RAB5BP61020 215 aa8.07□□□□□ -1.12
CCDC90B-216ENST00000529856 Q6ZRU5 148 aa8.07□□□□□ -1.12
CCDC90B-216ENST00000529856 LINC01561Q8N1V8 128 aa8.07□□□□□ -1.12
CCDC90B-216ENST00000529856 SPACA4Q8TDM5 124 aa8.07□□□□□ -1.12
CCDC90B-216ENST00000529856 DPH3Q96FX2 82 aa8.07□□□□□ -1.12
CCDC90B-216ENST00000529856 CAMK2N2Q96S95 79 aa8.07□□□□□ -1.12
CCDC90B-216ENST00000529856 F8WDY8 70 aa8.06□□□□□ -1.12
CCDC90B-216ENST00000529856 SEC11AP67812 179 aa8.06□□□□□ -1.12
CCDC90B-216ENST00000529856 PKIGQ9Y2B9 76 aa8.06□□□□□ -1.12
CCDC90B-216ENST00000529856 A0A087WYN8 130 aa8.05□□□□□ -1.12
CCDC90B-216ENST00000529856 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.05□□□□□ -1.12
CCDC90B-216ENST00000529856 PLA2G1BP04054 148 aaKnown RBP8.05□□□□□ -1.12
CCDC90B-216ENST00000529856 HERVK_113P63121 156 aa8.05□□□□□ -1.12
CCDC90B-216ENST00000529856 KIAA0087Q14695 138 aa8.05□□□□□ -1.12
CCDC90B-216ENST00000529856 RNF151Q2KHN1 245 aa8.05□□□□□ -1.12
CCDC90B-216ENST00000529856 CST9LQ9H4G1 147 aa8.05□□□□□ -1.12
CCDC90B-216ENST00000529856 SRRM2Q9UQ35 2752 aaKnown RBP8.04□□□□□ -1.12
CCDC90B-216ENST00000529856 A0A096LNI7 61 aa8.04□□□□□ -1.12
CCDC90B-216ENST00000529856 IGKV2-24A0A0C4DH68 120 aa8.04□□□□□ -1.12
CCDC90B-216ENST00000529856 A0A0J9YXV3 536 aa8.04□□□□□ -1.12
CCDC90B-216ENST00000529856 HBDP02042 147 aa8.04□□□□□ -1.12
CCDC90B-216ENST00000529856 MAJINQ3KP22 176 aa8.04□□□□□ -1.12
CCDC90B-216ENST00000529856 GEMIN7Q9H840 131 aaKnown RBP8.04□□□□□ -1.12
CCDC90B-216ENST00000529856 PLAC8Q9NZF1 115 aa8.04□□□□□ -1.12
CCDC90B-216ENST00000529856 CDKN2A-AS1Q9UH64 79 aa8.04□□□□□ -1.12
CCDC90B-216ENST00000529856 LOC107984640A0A0U1RRK4 108 aa8.03□□□□□ -1.12
CCDC90B-216ENST00000529856 COLCA2A8K830 154 aa8.03□□□□□ -1.12
CCDC90B-216ENST00000529856 NDUFA1O15239 70 aa8.03□□□□□ -1.12
CCDC90B-216ENST00000529856 TRGC2P03986 189 aa8.03□□□□□ -1.12
CCDC90B-216ENST00000529856 INAFM2P0DMQ5 153 aa8.03□□□□□ -1.12
CCDC90B-216ENST00000529856 PMVKQ15126 192 aa8.03□□□□□ -1.12
CCDC90B-216ENST00000529856 PMCHL1Q16048 86 aa8.03□□□□□ -1.12
CCDC90B-216ENST00000529856 PDZD11Q5EBL8 140 aa8.03□□□□□ -1.12
CCDC90B-216ENST00000529856 MRPL35Q9NZE8 188 aaKnown RBP8.03□□□□□ -1.12
CCDC90B-216ENST00000529856 LINC00474Q9P2X8 69 aa8.03□□□□□ -1.12
CCDC90B-216ENST00000529856 TINCRA0A1B0GVN0 87 aa8.02□□□□□ -1.13
CCDC90B-216ENST00000529856 C10orf25Q5T742 122 aa8.02□□□□□ -1.13
CCDC90B-216ENST00000529856 UNQ6190/PRO20217Q6UXQ8 127 aa8.02□□□□□ -1.13
CCDC90B-216ENST00000529856 CHCHD1Q96BP2 118 aaKnown RBP8.02□□□□□ -1.13
CCDC90B-216ENST00000529856 PTTG1IPP53801 180 aa8.01□□□□□ -1.13
CCDC90B-216ENST00000529856 KRTAP10-4P60372 401 aaPredicted RBP8.01□□□□□ -1.13
CCDC90B-216ENST00000529856 GAGE2BQ13066 116 aa8.01□□□□□ -1.13
CCDC90B-216ENST00000529856 STPG4Q8N801 248 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms