RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 XAF1Q6GPH4 301 aa1.42□□□□□ -2.18
SVIP-203ENST00000529848 LYPD5Q6UWN5 251 aa1.42□□□□□ -2.18
SVIP-203ENST00000529848 COMMD6Q7Z4G1 85 aa1.42□□□□□ -2.18
SVIP-203ENST00000529848 SERP2Q8N6R1 65 aa1.42□□□□□ -2.18
SVIP-203ENST00000529848 MAST4O15021 2626 aa1.42□□□□□ -2.18
SVIP-203ENST00000529848 NAV2Q8IVL1 2488 aa1.42□□□□□ -2.18
SVIP-203ENST00000529848 DIDO1Q9BTC0 2240 aaKnown RBP1.42□□□□□ -2.18
SVIP-203ENST00000529848 CEP295Q9C0D2 2601 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 SETXQ7Z333 2677 aaKnown RBP1.41□□□□□ -2.18
SVIP-203ENST00000529848 SCN3AQ9NY46 2000 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 TRAV2A0A0B4J234 112 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 IGHV1-24A0A0C4DH33 117 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 IGKV2-29A2NJV5 120 aaPredicted RBP1.41□□□□□ -2.18
SVIP-203ENST00000529848 NAP1L6A6NFF2 107 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 UMAD1C9J7I0 102 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 ASAH2BP0C7U1 165 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 ROMO1P60602 79 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 GNG11P61952 73 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 LSM3P62310 102 aaKnown RBP1.41□□□□□ -2.18
SVIP-203ENST00000529848 PMCHL1Q16048 86 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 MPV17LQ2QL34 196 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 C1orf134Q5TEV5 83 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 ZCCHC23Q6ZST2 131 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 DEFB119Q8N690 84 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 DEFB124Q8NES8 71 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 LINC01600Q96MT4 127 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 TRGV9Q99603 122 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 CST11Q9H112 138 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 NXT2Q9NPJ8 142 aaKnown RBP1.41□□□□□ -2.18
SVIP-203ENST00000529848 ASH1LQ9NR48 2969 aaKnown RBP1.41□□□□□ -2.18
SVIP-203ENST00000529848 NDUFA12Q9UI09 145 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 V9GYH0 126 aa1.41□□□□□ -2.18
SVIP-203ENST00000529848 ASCC3Q8N3C0 2202 aaKnown RBP1.41□□□□□ -2.18
SVIP-203ENST00000529848 FLNBO75369 2602 aaKnown RBP1.41□□□□□ -2.18
SVIP-203ENST00000529848 BAZ2BQ9UIF8 2168 aaKnown RBP1.41□□□□□ -2.18
SVIP-203ENST00000529848 FN1P02751 2386 aaKnown RBP1.41□□□□□ -2.18
SVIP-203ENST00000529848 GCN1Q92616 2671 aaKnown RBP1.41□□□□□ -2.18
SVIP-203ENST00000529848 CEP192Q8TEP8 1941 aa1.4□□□□□ -2.18
SVIP-203ENST00000529848 F5P12259 2224 aa1.4□□□□□ -2.18
SVIP-203ENST00000529848 SDK1Q7Z5N4 2213 aa1.4□□□□□ -2.18
SVIP-203ENST00000529848 ACACAQ13085 2346 aa1.4□□□□□ -2.18
SVIP-203ENST00000529848 ASPMQ8IZT6 3477 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 PCDH15Q96QU1 1955 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 TRAV3A0A0B4J244 114 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 LOC107984156A0A0G2JMH3 177 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 H7BZZ5 65 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 CRPP02741 224 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 PRB4P10163 310 aaPredicted RBP1.4□□□□□ -2.19
SVIP-203ENST00000529848 FAM27BQ5VT28 67 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 ARL17AQ8IVW1 177 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 LINC00269Q8N2A0 174 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 MGST2Q99735 147 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 MRPL35Q9NZE8 188 aaKnown RBP1.4□□□□□ -2.19
SVIP-203ENST00000529848 ZFHX3Q15911 3703 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 APC2O95996 2303 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 PI4KAP42356 2102 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 SPEGQ15772 3267 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 COL6A6A6NMZ7 2263 aa1.4□□□□□ -2.19
SVIP-203ENST00000529848 HELZ2Q9BYK8 2649 aaKnown RBP1.39□□□□□ -2.19
SVIP-203ENST00000529848 CACNA1EQ15878 2313 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 MYO18BQ8IUG5 2567 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 SMG1Q96Q15 3661 aaKnown RBP1.39□□□□□ -2.19
SVIP-203ENST00000529848 PTPN13Q12923 2485 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 A0A0D9SFI3 127 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 TRBV10-2A0A0K0K1G8 114 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 hDV103S1A0JD37 113 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 CRYM-AS1A6NIL9 109 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 F2Z2F3 143 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 C17orf112F2Z3M2 114 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 PIPP12273 146 aaPredicted RBP1.39□□□□□ -2.19
SVIP-203ENST00000529848 DSCR4P56555 118 aaPredicted RBP1.39□□□□□ -2.19
SVIP-203ENST00000529848 UBE2G1P62253 170 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 Q6ZQT0 140 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 FAM223AQ8IWN6 122 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 DYNLRB2Q8TF09 96 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 Q96M85 177 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 BPESC1Q9GZL8 116 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 DOPEY2Q9Y3R5 2298 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 FRYQ5TBA9 3013 aa1.39□□□□□ -2.19
SVIP-203ENST00000529848 URB1O60287 2271 aaKnown RBP1.38□□□□□ -2.19
SVIP-203ENST00000529848 ZNF462Q96JM2 2506 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 MED13Q9UHV7 2174 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 DOCK11Q5JSL3 2073 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 PTPRQQ9UMZ3 2332 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 IGKV1D-42A0A075B6H8 117 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 KANTRA0A1W2PQU2 76 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 TCRBV4S1A1TA0A5B7 111 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 LYRM1O43325 122 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 TFF1P04155 84 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 SMIM13P0DJ93 91 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 CXCL8P10145 99 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 FXYD2P54710 66 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 NNATQ16517 81 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 ESRGQ1W209 222 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 SPANXN1Q5VSR9 72 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 RPL7L1Q6DKI1 246 aaKnown RBP1.38□□□□□ -2.19
SVIP-203ENST00000529848 SPTSSBQ8NFR3 76 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 TMEM141Q96I45 108 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 IGSF10Q6WRI0 2623 aa1.38□□□□□ -2.19
SVIP-203ENST00000529848 SPTA1P02549 2419 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms