RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 GAGE12HA6NDE8 117 aa10.6□□□□□ -0.71
TSPAN4-213ENST00000524895 DPM2O94777 84 aa10.6□□□□□ -0.71
TSPAN4-213ENST00000524895 AKR1D1P51857 326 aa10.6□□□□□ -0.71
TSPAN4-213ENST00000524895 CD164L2Q6UWJ8 174 aa10.6□□□□□ -0.71
TSPAN4-213ENST00000524895 NFE4Q86UQ8 179 aa10.6□□□□□ -0.71
TSPAN4-213ENST00000524895 C11orf86A6NJI1 115 aa10.59□□□□□ -0.71
TSPAN4-213ENST00000524895 SCGB1D1O95968 90 aa10.59□□□□□ -0.71
TSPAN4-213ENST00000524895 IGKCP01834 107 aa10.59□□□□□ -0.71
TSPAN4-213ENST00000524895 LINC00469Q8N7U9 141 aa10.59□□□□□ -0.71
TSPAN4-213ENST00000524895 TM2D2Q9BX73 214 aa10.59□□□□□ -0.71
TSPAN4-213ENST00000524895 COX11Q9Y6N1 276 aa10.59□□□□□ -0.71
TSPAN4-213ENST00000524895 COX6A2Q02221 97 aa10.58□□□□□ -0.72
TSPAN4-213ENST00000524895 COX7A2LO14548 114 aa10.57□□□□□ -0.72
TSPAN4-213ENST00000524895 FOXI1Q12951 378 aa10.57□□□□□ -0.72
TSPAN4-213ENST00000524895 TMEM170BQ5T4T1 132 aa10.57□□□□□ -0.72
TSPAN4-213ENST00000524895 C6orf223Q8N319 242 aa10.57□□□□□ -0.72
TSPAN4-213ENST00000524895 IGLV5-45A0A087WSX0 123 aa10.56□□□□□ -0.72
TSPAN4-213ENST00000524895 IGHV3OR16-9A0A0B4J2B5 98 aa10.56□□□□□ -0.72
TSPAN4-213ENST00000524895 H3BRM9 83 aa10.56□□□□□ -0.72
TSPAN4-213ENST00000524895 PSCAO43653 123 aa10.56□□□□□ -0.72
TSPAN4-213ENST00000524895 ZNF22P17026 224 aaPredicted RBP10.56□□□□□ -0.72
TSPAN4-213ENST00000524895 KRTAP26-1Q6PEX3 210 aa10.56□□□□□ -0.72
TSPAN4-213ENST00000524895 C5orf38Q86SI9 138 aa10.56□□□□□ -0.72
TSPAN4-213ENST00000524895 CDKN2A-AS1Q9UH64 79 aa10.56□□□□□ -0.72
TSPAN4-213ENST00000524895 MALP21145 153 aa10.55□□□□□ -0.72
TSPAN4-213ENST00000524895 C1orf134Q5TEV5 83 aa10.55□□□□□ -0.72
TSPAN4-213ENST00000524895 A0A087WZ39 114 aa10.54□□□□□ -0.72
TSPAN4-213ENST00000524895 LOC105371267A0A1B0GV96 52 aa10.54□□□□□ -0.72
TSPAN4-213ENST00000524895 JOSD1Q15040 202 aaPredicted RBP10.54□□□□□ -0.72
TSPAN4-213ENST00000524895 ATOH7Q8N100 152 aa10.54□□□□□ -0.72
TSPAN4-213ENST00000524895 DNAH6Q9C0G6 4158 aa10.53□□□□□ -0.72
TSPAN4-213ENST00000524895 SPINK8P0C7L1 97 aa10.52□□□□□ -0.73
TSPAN4-213ENST00000524895 Q6ZRN7 208 aaPredicted RBP10.52□□□□□ -0.73
TSPAN4-213ENST00000524895 APOMO95445 188 aa10.51□□□□□ -0.73
TSPAN4-213ENST00000524895 HERVK_113P61574 105 aa10.51□□□□□ -0.73
TSPAN4-213ENST00000524895 PYY3Q5JQD4 70 aa10.51□□□□□ -0.73
TSPAN4-213ENST00000524895 LINC01561Q8N1V8 128 aa10.51□□□□□ -0.73
TSPAN4-213ENST00000524895 KMT2AQ03164 3969 aa10.5□□□□□ -0.73
TSPAN4-213ENST00000524895 TMEM223A0PJW6 202 aa10.5□□□□□ -0.73
TSPAN4-213ENST00000524895 SMIM1B2RUZ4 78 aa10.5□□□□□ -0.73
TSPAN4-213ENST00000524895 MAPKAPK5-AS1Q8N8E1 139 aa10.5□□□□□ -0.73
TSPAN4-213ENST00000524895 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
TSPAN4-213ENST00000524895 IGHV1-58A0A0C4DH39 117 aa10.49□□□□□ -0.73
TSPAN4-213ENST00000524895 CFAP161Q6P656 301 aa10.49□□□□□ -0.73
TSPAN4-213ENST00000524895 hDV102S1A0JD36 115 aa10.48□□□□□ -0.73
TSPAN4-213ENST00000524895 HSBP1L1C9JCN9 74 aa10.48□□□□□ -0.73
TSPAN4-213ENST00000524895 USP17L23D6RBM5 183 aa10.48□□□□□ -0.73
TSPAN4-213ENST00000524895 STPG4Q8N801 248 aa10.48□□□□□ -0.73
TSPAN4-213ENST00000524895 ORAOV1Q8WV07 137 aa10.48□□□□□ -0.73
TSPAN4-213ENST00000524895 LECT2O14960 151 aa10.47□□□□□ -0.73
TSPAN4-213ENST00000524895 C15orf56Q8N910 161 aa10.47□□□□□ -0.73
TSPAN4-213ENST00000524895 TOMM7Q9P0U1 55 aa10.47□□□□□ -0.73
TSPAN4-213ENST00000524895 SACSQ9NZJ4 4579 aa10.47□□□□□ -0.73
TSPAN4-213ENST00000524895 SPAG11BQ08648 103 aa10.46□□□□□ -0.73
TSPAN4-213ENST00000524895 IGLV5-39A0A0G2JS06 123 aa10.45□□□□□ -0.74
TSPAN4-213ENST00000524895 PRSS2P07478 247 aa10.45□□□□□ -0.74
TSPAN4-213ENST00000524895 SMIM6P0DI80 62 aa10.45□□□□□ -0.74
TSPAN4-213ENST00000524895 MAJINQ3KP22 176 aa10.45□□□□□ -0.74
TSPAN4-213ENST00000524895 HIGD2BQ4VC39 106 aa10.45□□□□□ -0.74
TSPAN4-213ENST00000524895 COX7B2Q8TF08 81 aa10.45□□□□□ -0.74
TSPAN4-213ENST00000524895 GVQW2A0A096LPI5 108 aaPredicted RBP10.44□□□□□ -0.74
TSPAN4-213ENST00000524895 E9PLD3 99 aa10.44□□□□□ -0.74
TSPAN4-213ENST00000524895 ZNF561-AS1K7EIQ3 104 aa10.44□□□□□ -0.74
TSPAN4-213ENST00000524895 LEPROTO15243 131 aa10.44□□□□□ -0.74
TSPAN4-213ENST00000524895 WFDC2Q14508 124 aa10.44□□□□□ -0.74
TSPAN4-213ENST00000524895 VAMP8Q9BV40 100 aa10.44□□□□□ -0.74
TSPAN4-213ENST00000524895 HYDINQ4G0P3 5121 aa10.44□□□□□ -0.74
TSPAN4-213ENST00000524895 LRCOL1A6NCL2 159 aa10.43□□□□□ -0.74
TSPAN4-213ENST00000524895 RTL8CO15255 209 aa10.43□□□□□ -0.74
TSPAN4-213ENST00000524895 C14orf177Q52M58 125 aa10.43□□□□□ -0.74
TSPAN4-213ENST00000524895 ANKRD39Q53RE8 183 aa10.43□□□□□ -0.74
TSPAN4-213ENST00000524895 Q8IZM0 81 aa10.43□□□□□ -0.74
TSPAN4-213ENST00000524895 PLEKHB2Q96CS7 222 aa10.43□□□□□ -0.74
TSPAN4-213ENST00000524895 DNAH10Q8IVF4 4471 aa10.42□□□□□ -0.74
TSPAN4-213ENST00000524895 DNAH2Q9P225 4427 aa10.42□□□□□ -0.74
TSPAN4-213ENST00000524895 KMT2CQ8NEZ4 4911 aaKnown RBP10.42□□□□□ -0.74
TSPAN4-213ENST00000524895 C6orf226Q5I0X4 101 aa10.42□□□□□ -0.74
TSPAN4-213ENST00000524895 CDPF1Q6NVV7 123 aa10.42□□□□□ -0.74
TSPAN4-213ENST00000524895 PAM16Q9Y3D7 125 aa10.42□□□□□ -0.74
TSPAN4-213ENST00000524895 A0A087WTM6 91 aa10.41□□□□□ -0.74
TSPAN4-213ENST00000524895 J3QQQ9 107 aa10.41□□□□□ -0.74
TSPAN4-213ENST00000524895 LGALS3P17931 250 aaKnown RBP10.41□□□□□ -0.74
TSPAN4-213ENST00000524895 NMUP48645 174 aa10.41□□□□□ -0.74
TSPAN4-213ENST00000524895 LINC00526Q96FQ7 95 aa10.41□□□□□ -0.74
TSPAN4-213ENST00000524895 IGKV2D-26A0A0A0MRZ7 120 aa10.4□□□□□ -0.74
TSPAN4-213ENST00000524895 TSPEAR-AS2P59090 65 aa10.4□□□□□ -0.74
TSPAN4-213ENST00000524895 CKS1BP61024 79 aa10.4□□□□□ -0.74
TSPAN4-213ENST00000524895 S100A12P80511 92 aa10.4□□□□□ -0.74
TSPAN4-213ENST00000524895 KIAA0087Q14695 138 aa10.4□□□□□ -0.74
TSPAN4-213ENST00000524895 SPATA45Q537H7 98 aa10.4□□□□□ -0.74
TSPAN4-213ENST00000524895 EREGO14944 169 aa10.39□□□□□ -0.75
TSPAN4-213ENST00000524895 CXCL5P42830 114 aa10.39□□□□□ -0.75
TSPAN4-213ENST00000524895 TNP2Q05952 138 aa10.39□□□□□ -0.75
TSPAN4-213ENST00000524895 RYR2Q92736 4967 aa10.39□□□□□ -0.75
TSPAN4-213ENST00000524895 Q8N814 137 aa10.38□□□□□ -0.75
TSPAN4-213ENST00000524895 NTN5Q8WTR8 489 aaPredicted RBP10.38□□□□□ -0.75
TSPAN4-213ENST00000524895 C2orf48Q96LS8 159 aa10.38□□□□□ -0.75
TSPAN4-213ENST00000524895 CAMK2N2Q96S95 79 aa10.38□□□□□ -0.75
TSPAN4-213ENST00000524895 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.37□□□□□ -0.75
TSPAN4-213ENST00000524895 NDUFA1O15239 70 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms