RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 PEMTQ9UBM1 199 aa13□□□□□ -0.33
PCDHB18P-201ENST00000524813 VPREB3Q9UKI3 123 aa13□□□□□ -0.33
PCDHB18P-201ENST00000524813 NTM-AS1Q6ZSK4 140 aa12.99□□□□□ -0.33
PCDHB18P-201ENST00000524813 Q9HAA7 133 aa12.99□□□□□ -0.33
PCDHB18P-201ENST00000524813 PDZD2O15018 2839 aa12.99□□□□□ -0.33
PCDHB18P-201ENST00000524813 TEX15Q9BXT5 2789 aa12.99□□□□□ -0.33
PCDHB18P-201ENST00000524813 UNC79Q9P2D8 2635 aa12.99□□□□□ -0.33
PCDHB18P-201ENST00000524813 CSDC2Q9Y534 153 aaKnown RBP12.99□□□□□ -0.33
PCDHB18P-201ENST00000524813 HECTD1Q9ULT8 2610 aa12.98□□□□□ -0.33
PCDHB18P-201ENST00000524813 J3QLI3 93 aa12.98□□□□□ -0.33
PCDHB18P-201ENST00000524813 FASNP49327 2511 aaKnown RBP12.98□□□□□ -0.33
PCDHB18P-201ENST00000524813 TRGV1A0A0A0MS02 117 aa12.98□□□□□ -0.33
PCDHB18P-201ENST00000524813 FAM222AQ5U5X8 452 aa12.98□□□□□ -0.33
PCDHB18P-201ENST00000524813 HIST2H2BDQ6DRA6 164 aa12.98□□□□□ -0.33
PCDHB18P-201ENST00000524813 GAGE2AQ6NT46 116 aa12.98□□□□□ -0.33
PCDHB18P-201ENST00000524813 C3orf22Q8N5N4 141 aa12.98□□□□□ -0.33
PCDHB18P-201ENST00000524813 CDC42SE2Q9NRR3 84 aa12.98□□□□□ -0.33
PCDHB18P-201ENST00000524813 XCL2Q9UBD3 114 aa12.98□□□□□ -0.33
PCDHB18P-201ENST00000524813 C9orf153Q5TBE3 101 aa12.97□□□□□ -0.33
PCDHB18P-201ENST00000524813 INAFM2P0DMQ5 153 aa12.96□□□□□ -0.33
PCDHB18P-201ENST00000524813 RPL36AP83881 106 aaKnown RBP12.96□□□□□ -0.33
PCDHB18P-201ENST00000524813 RPL36ALQ969Q0 106 aaKnown RBP12.96□□□□□ -0.33
PCDHB18P-201ENST00000524813 TLN2Q9Y4G6 2542 aa12.96□□□□□ -0.33
PCDHB18P-201ENST00000524813 FLNAP21333 2647 aaKnown RBP12.96□□□□□ -0.33
PCDHB18P-201ENST00000524813 MALP21145 153 aa12.96□□□□□ -0.33
PCDHB18P-201ENST00000524813 DYNLRB2Q8TF09 96 aa12.95□□□□□ -0.34
PCDHB18P-201ENST00000524813 RPL28P46779 137 aaKnown RBP12.95□□□□□ -0.34
PCDHB18P-201ENST00000524813 C5orf38Q86SI9 138 aa12.95□□□□□ -0.34
PCDHB18P-201ENST00000524813 TRAV13-2A0A0B4J235 113 aa12.94□□□□□ -0.34
PCDHB18P-201ENST00000524813 K7EQD1 137 aa12.94□□□□□ -0.34
PCDHB18P-201ENST00000524813 CXCL5P42830 114 aa12.94□□□□□ -0.34
PCDHB18P-201ENST00000524813 UQCRQO14949 82 aa12.94□□□□□ -0.34
PCDHB18P-201ENST00000524813 PPDPFQ9H3Y8 114 aa12.94□□□□□ -0.34
PCDHB18P-201ENST00000524813 CRPP02741 224 aa12.93□□□□□ -0.34
PCDHB18P-201ENST00000524813 PF4P02776 101 aa12.93□□□□□ -0.34
PCDHB18P-201ENST00000524813 Q6YL49 198 aa12.93□□□□□ -0.34
PCDHB18P-201ENST00000524813 LINC00337Q8N6G1 96 aa12.93□□□□□ -0.34
PCDHB18P-201ENST00000524813 TRBV10-1A0A0K0K1A3 114 aa12.92□□□□□ -0.34
PCDHB18P-201ENST00000524813 ATP5G1P05496 136 aa12.92□□□□□ -0.34
PCDHB18P-201ENST00000524813 C1orf158Q8N1D5 194 aa12.92□□□□□ -0.34
PCDHB18P-201ENST00000524813 IL17DQ8TAD2 202 aa12.92□□□□□ -0.34
PCDHB18P-201ENST00000524813 DEFB114Q30KQ6 69 aa12.92□□□□□ -0.34
PCDHB18P-201ENST00000524813 MIR7-3HGQ8N6C7 128 aa12.92□□□□□ -0.34
PCDHB18P-201ENST00000524813 IGKV2-28A0A075B6P5 120 aa12.91□□□□□ -0.34
PCDHB18P-201ENST00000524813 IGKV2D-28P01615 120 aa12.91□□□□□ -0.34
PCDHB18P-201ENST00000524813 KHDC1LQ5JSQ8 128 aa12.91□□□□□ -0.34
PCDHB18P-201ENST00000524813 Q6ZTI0 123 aa12.91□□□□□ -0.34
PCDHB18P-201ENST00000524813 LINC00526Q96FQ7 95 aa12.91□□□□□ -0.34
PCDHB18P-201ENST00000524813 FSHBP01225 129 aa12.91□□□□□ -0.34
PCDHB18P-201ENST00000524813 SND1-IT1Q9HBX3 110 aa12.91□□□□□ -0.34
PCDHB18P-201ENST00000524813 UBE2L6O14933 153 aa12.9□□□□□ -0.34
PCDHB18P-201ENST00000524813 A0A087WYN8 130 aa12.89□□□□□ -0.35
PCDHB18P-201ENST00000524813 COX7B2Q8TF08 81 aa12.89□□□□□ -0.35
PCDHB18P-201ENST00000524813 SONP18583 2426 aaKnown RBP12.89□□□□□ -0.35
PCDHB18P-201ENST00000524813 DNAL4O96015 105 aa12.88□□□□□ -0.35
PCDHB18P-201ENST00000524813 TOMM7Q9P0U1 55 aa12.88□□□□□ -0.35
PCDHB18P-201ENST00000524813 ODF3L2Q3SX64 289 aa12.88□□□□□ -0.35
PCDHB18P-201ENST00000524813 C9orf129Q5T035 196 aaKnown RBP12.88□□□□□ -0.35
PCDHB18P-201ENST00000524813 STHQ8IWL8 128 aa12.88□□□□□ -0.35
PCDHB18P-201ENST00000524813 SMIM11BQ8TCY0 68 aa12.88□□□□□ -0.35
PCDHB18P-201ENST00000524813 TMEM243Q9BU79 118 aa12.88□□□□□ -0.35
PCDHB18P-201ENST00000524813 C4orf3Q8WVX3 66 aa12.87□□□□□ -0.35
PCDHB18P-201ENST00000524813 ACANP16112 2415 aa12.87□□□□□ -0.35
PCDHB18P-201ENST00000524813 COX7CP15954 63 aa12.87□□□□□ -0.35
PCDHB18P-201ENST00000524813 OVOL2Q9BRP0 275 aa12.87□□□□□ -0.35
PCDHB18P-201ENST00000524813 C14orf132Q9NPU4 83 aa12.86□□□□□ -0.35
PCDHB18P-201ENST00000524813 CUBNO60494 3623 aa12.86□□□□□ -0.35
PCDHB18P-201ENST00000524813 AKAP9Q99996 3911 aa12.86□□□□□ -0.35
PCDHB18P-201ENST00000524813 LINC00158P58513 81 aa12.86□□□□□ -0.35
PCDHB18P-201ENST00000524813 C2orf48Q96LS8 159 aa12.85□□□□□ -0.35
PCDHB18P-201ENST00000524813 KLK5Q9Y337 293 aaPredicted RBP12.85□□□□□ -0.35
PCDHB18P-201ENST00000524813 IGKV3OR2-268A0A0C4DH90 116 aa12.85□□□□□ -0.35
PCDHB18P-201ENST00000524813 HIST1H4AP62805 103 aaKnown RBP12.85□□□□□ -0.35
PCDHB18P-201ENST00000524813 CFAP161Q6P656 301 aa12.85□□□□□ -0.35
PCDHB18P-201ENST00000524813 NOP10Q9NPE3 64 aaKnown RBP12.84□□□□□ -0.35
PCDHB18P-201ENST00000524813 MYO9AB2RTY4 2548 aa12.83□□□□□ -0.36
PCDHB18P-201ENST00000524813 CCL18P55774 89 aa12.83□□□□□ -0.36
PCDHB18P-201ENST00000524813 LOC100131303A0A0U1RQF7 123 aa12.83□□□□□ -0.36
PCDHB18P-201ENST00000524813 ATOX1O00244 68 aa12.83□□□□□ -0.36
PCDHB18P-201ENST00000524813 H0YGX0 51 aa12.82□□□□□ -0.36
PCDHB18P-201ENST00000524813 KRTAP1-1Q07627 177 aa12.81□□□□□ -0.36
PCDHB18P-201ENST00000524813 IGKV3D-7A0A0C4DH55 119 aa12.81□□□□□ -0.36
PCDHB18P-201ENST00000524813 LECT2O14960 151 aa12.8□□□□□ -0.36
PCDHB18P-201ENST00000524813 OBSCN-AS1Q96MR7 158 aa12.8□□□□□ -0.36
PCDHB18P-201ENST00000524813 LINC00846Q9NV44 126 aa12.8□□□□□ -0.36
PCDHB18P-201ENST00000524813 NOTCH2Q04721 2471 aa12.8□□□□□ -0.36
PCDHB18P-201ENST00000524813 LOC107984640A0A0U1RRK4 108 aa12.79□□□□□ -0.36
PCDHB18P-201ENST00000524813 CRYGAP11844 174 aa12.79□□□□□ -0.36
PCDHB18P-201ENST00000524813 PFN2P35080 140 aa12.79□□□□□ -0.36
PCDHB18P-201ENST00000524813 IGLV4-60A0A075B6I1 120 aa12.78□□□□□ -0.36
PCDHB18P-201ENST00000524813 NCR3O14931 201 aa12.78□□□□□ -0.36
PCDHB18P-201ENST00000524813 RPL18AQ02543 176 aaKnown RBP12.78□□□□□ -0.36
PCDHB18P-201ENST00000524813 Q6JHZ5 121 aa12.78□□□□□ -0.36
PCDHB18P-201ENST00000524813 TRGV2A0A075B6R0 118 aa12.77□□□□□ -0.36
PCDHB18P-201ENST00000524813 IBA57-AS1B1ANH7 110 aa12.77□□□□□ -0.36
PCDHB18P-201ENST00000524813 PAX4O43316 350 aa12.77□□□□□ -0.36
PCDHB18P-201ENST00000524813 SLPIP03973 132 aa12.77□□□□□ -0.36
PCDHB18P-201ENST00000524813 OR13C6PQ8NH95 151 aa12.77□□□□□ -0.36
PCDHB18P-201ENST00000524813 IGHV3OR16-9A0A0B4J2B5 98 aa12.77□□□□□ -0.37
PCDHB18P-201ENST00000524813 hADV29S1A0JD25 119 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms