RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 PDE6HQ13956 83 aa1.01□□□□□ -2.25
PCM1-219ENST00000523540 C1orf137Q5JT78 98 aa1.01□□□□□ -2.25
PCM1-219ENST00000523540 Q5VV11 94 aa1.01□□□□□ -2.25
PCM1-219ENST00000523540 CSAG1Q6PB30 78 aa1.01□□□□□ -2.25
PCM1-219ENST00000523540 SFTA2Q6UW10 78 aa1.01□□□□□ -2.25
PCM1-219ENST00000523540 FAM223AQ8IWN6 122 aa1.01□□□□□ -2.25
PCM1-219ENST00000523540 DMAC1Q96GE9 116 aa1.01□□□□□ -2.25
PCM1-219ENST00000523540 BPESC1Q9GZL8 116 aa1.01□□□□□ -2.25
PCM1-219ENST00000523540 DYNLRB1Q9NP97 96 aa1.01□□□□□ -2.25
PCM1-219ENST00000523540 KIAA0100Q14667 2235 aaKnown RBP1.01□□□□□ -2.25
PCM1-219ENST00000523540 HEATR1Q9H583 2144 aaKnown RBP1.01□□□□□ -2.25
PCM1-219ENST00000523540 CEP192Q8TEP8 1941 aa1.01□□□□□ -2.25
PCM1-219ENST00000523540 COL14A1Q05707 1796 aaKnown RBP1.01□□□□□ -2.25
PCM1-219ENST00000523540 SHPRHQ149N8 1683 aa1□□□□□ -2.25
PCM1-219ENST00000523540 NHSQ6T4R5 1651 aa1□□□□□ -2.25
PCM1-219ENST00000523540 CTTNBP2Q8WZ74 1663 aa1□□□□□ -2.25
PCM1-219ENST00000523540 ALS2Q96Q42 1657 aa1□□□□□ -2.25
PCM1-219ENST00000523540 LRRC7Q96NW7 1537 aa1□□□□□ -2.25
PCM1-219ENST00000523540 RALGAPBQ86X10 1494 aa1□□□□□ -2.25
PCM1-219ENST00000523540 NUPR2A6NF83 97 aa1□□□□□ -2.25
PCM1-219ENST00000523540 IQCF6A8MYZ5 107 aa1□□□□□ -2.25
PCM1-219ENST00000523540 F8WEM9 126 aa1□□□□□ -2.25
PCM1-219ENST00000523540 IGHV3-33P01772 117 aa1□□□□□ -2.25
PCM1-219ENST00000523540 HMGN2P05204 90 aaKnown RBP1□□□□□ -2.25
PCM1-219ENST00000523540 IL9P15248 144 aa1□□□□□ -2.25
PCM1-219ENST00000523540 PSMG4Q5JS54 123 aa1□□□□□ -2.25
PCM1-219ENST00000523540 SMIM5Q71RC9 77 aa1□□□□□ -2.25
PCM1-219ENST00000523540 C20orf197Q8N268 126 aa1□□□□□ -2.25
PCM1-219ENST00000523540 C4orf3Q8WVX3 66 aa1□□□□□ -2.25
PCM1-219ENST00000523540 PATE1Q8WXA2 126 aa1□□□□□ -2.25
PCM1-219ENST00000523540 NDUFA4L2Q9NRX3 87 aa1□□□□□ -2.25
PCM1-219ENST00000523540 ORMDL1Q9P0S3 153 aa1□□□□□ -2.25
PCM1-219ENST00000523540 TNRC6BQ9UPQ9 1833 aaKnown RBP1□□□□□ -2.25
PCM1-219ENST00000523540 TIAM2Q8IVF5 1701 aa1□□□□□ -2.25
PCM1-219ENST00000523540 PAPPAQ13219 1627 aa1□□□□□ -2.25
PCM1-219ENST00000523540 CDC42BPGQ6DT37 1551 aa1□□□□□ -2.25
PCM1-219ENST00000523540 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
PCM1-219ENST00000523540 UGGT1Q9NYU2 1555 aa1□□□□□ -2.25
PCM1-219ENST00000523540 MAST1Q9Y2H9 1570 aa1□□□□□ -2.25
PCM1-219ENST00000523540 ANKRD36CQ5JPF3 1778 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 TRBV6-7A0A0A0MS04 114 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 MYMXA0A1B0GTQ4 84 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 ZNF815PA8K554 130 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 HIGD1CA8MV81 97 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 TMEM14DPA8MWL7 114 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 PI4KAP42356 2102 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 ELOF1P60002 83 aaKnown RBP0.99□□□□□ -2.25
PCM1-219ENST00000523540 PLGLAQ15195 96 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 XAF1Q6GPH4 301 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 C6orf201Q7Z4U5 140 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 CDC42SE2Q9NRR3 84 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 MRPL36Q9P0J6 103 aaKnown RBP0.99□□□□□ -2.25
PCM1-219ENST00000523540 LENEPQ9Y5L5 61 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 V9GYH0 126 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 KIAA0556O60303 1618 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 CEP170BQ9Y4F5 1589 aaPredicted RBP0.99□□□□□ -2.25
PCM1-219ENST00000523540 ROS1P08922 2347 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 ZFHX3Q15911 3703 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 MRC1P22897 1456 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 ZNF236Q9UL36 1845 aa0.99□□□□□ -2.25
PCM1-219ENST00000523540 BCORQ6W2J9 1755 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 SPTBP11277 2137 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 ESPL1Q14674 2120 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 C5P01031 1676 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 USP32Q8NFA0 1604 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 IGLV3-32A0A0A0MS00 114 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 TRBV6-8A0A0A6YYG3 113 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 A0A0J9YY99 117 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 LOC101927531A0A1B0GV80 90 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 LOC285095A0A1B0GVY8 99 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 A0A1B0GWA3 101 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 FAM223BA6NKX1 122 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 CEBPZOSA8MTT3 80 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 FXYD1O00168 92 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 HMGN4O00479 90 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 PPP1R17O96001 155 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 SAA2P0DJI9 122 aaPredicted RBP0.98□□□□□ -2.25
PCM1-219ENST00000523540 COX8AP10176 69 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 GCHFRP30047 84 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 CNBPP62633 177 aaKnown RBP0.98□□□□□ -2.25
PCM1-219ENST00000523540 PRB3Q04118 309 aaPredicted RBP0.98□□□□□ -2.25
PCM1-219ENST00000523540 DEFB121Q5J5C9 76 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 TMEM14BQ9NUH8 114 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 PSENENQ9NZ42 101 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 HILPDAQ9Y5L2 63 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 UBR3Q6ZT12 1888 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 RP1P56715 2156 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 ARFGEF3Q5TH69 2177 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 MYO7BQ6PIF6 2116 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 FMN2Q9NZ56 1722 aa0.98□□□□□ -2.25
PCM1-219ENST00000523540 EIF2AK4Q9P2K8 1649 aaKnown RBP0.97□□□□□ -2.25
PCM1-219ENST00000523540 TET1Q8NFU7 2136 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 ANKRD17O75179 2603 aaKnown RBP0.97□□□□□ -2.25
PCM1-219ENST00000523540 CLPSL1A2RUU4 121 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 JMJD7-PLA2G4BH0Y9G9 81 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 HCRTO43612 131 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 DNAL4O96015 105 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 PPYP01298 95 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 IGHV3-30P01768 117 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 ARMS2P0C7Q2 107 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms