RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 GAGE2EQ4V326 116 aa13.56□□□□□ -0.24
PVT1-218ENST00000523328 GAGE2DQ9UEU5 116 aa13.56□□□□□ -0.24
PVT1-218ENST00000523328 M0QXV9 152 aa13.55□□□□□ -0.24
PVT1-218ENST00000523328 RPL39P62891 51 aaKnown RBP13.55□□□□□ -0.24
PVT1-218ENST00000523328 LINC01551Q86U37 167 aa13.55□□□□□ -0.24
PVT1-218ENST00000523328 PPP1R2P9O14990 202 aa13.54□□□□□ -0.24
PVT1-218ENST00000523328 CEBPGP53567 150 aa13.54□□□□□ -0.24
PVT1-218ENST00000523328 UBE2BP63146 152 aa13.53□□□□□ -0.24
PVT1-218ENST00000523328 RIGQ13278 110 aa13.53□□□□□ -0.24
PVT1-218ENST00000523328 LCE2AQ5TA79 106 aaPredicted RBP13.53□□□□□ -0.24
PVT1-218ENST00000523328 OSTCQ9NRP0 149 aa13.53□□□□□ -0.24
PVT1-218ENST00000523328 FAT4Q6V0I7 4981 aa13.53□□□□□ -0.24
PVT1-218ENST00000523328 CARHSP1Q9Y2V2 147 aaKnown RBP13.52□□□□□ -0.25
PVT1-218ENST00000523328 KIAA0087Q14695 138 aa13.51□□□□□ -0.25
PVT1-218ENST00000523328 MRPL51Q4U2R6 128 aaKnown RBP13.51□□□□□ -0.25
PVT1-218ENST00000523328 SMIM7Q9BQ49 75 aa13.5□□□□□ -0.25
PVT1-218ENST00000523328 C20orf78Q9BR46 151 aa13.5□□□□□ -0.25
PVT1-218ENST00000523328 V9GYV3 84 aa13.5□□□□□ -0.25
PVT1-218ENST00000523328 RPL32P62910 135 aaKnown RBP13.49□□□□□ -0.25
PVT1-218ENST00000523328 MRPS36P82909 103 aaKnown RBP13.49□□□□□ -0.25
PVT1-218ENST00000523328 FAM104BQ5XKR9 115 aa13.49□□□□□ -0.25
PVT1-218ENST00000523328 SPANXA1Q9NS26 97 aa13.49□□□□□ -0.25
PVT1-218ENST00000523328 TRBV24-1A0A075B6N3 115 aa13.48□□□□□ -0.25
PVT1-218ENST00000523328 C9orf129Q5T035 196 aaKnown RBP13.48□□□□□ -0.25
PVT1-218ENST00000523328 IFITM10A6NMD0 228 aa13.47□□□□□ -0.25
PVT1-218ENST00000523328 HBBP68871 147 aa13.47□□□□□ -0.25
PVT1-218ENST00000523328 TCTE3Q8IZS6 198 aa13.47□□□□□ -0.25
PVT1-218ENST00000523328 TRBV30A0A0K0K1B3 111 aa13.46□□□□□ -0.25
PVT1-218ENST00000523328 LINC00862A6NCI5 91 aa13.46□□□□□ -0.25
PVT1-218ENST00000523328 TCAPO15273 167 aa13.46□□□□□ -0.25
PVT1-218ENST00000523328 ZNF861PO60384 105 aa13.46□□□□□ -0.25
PVT1-218ENST00000523328 BLOC1S1P78537 153 aa13.46□□□□□ -0.25
PVT1-218ENST00000523328 NDUFC2-KCTD14E9PQ53 114 aa13.45□□□□□ -0.26
PVT1-218ENST00000523328 TSPAN13O95857 204 aa13.45□□□□□ -0.26
PVT1-218ENST00000523328 TGIF2-C20orf24A0A0A6YYL0 155 aa13.44□□□□□ -0.26
PVT1-218ENST00000523328 ZNF727A8MUV8 499 aa13.44□□□□□ -0.26
PVT1-218ENST00000523328 C2orf82Q6UX34 121 aa13.44□□□□□ -0.26
PVT1-218ENST00000523328 SMIM2Q9BVW6 85 aa13.44□□□□□ -0.26
PVT1-218ENST00000523328 NAT8BQ9UHF3 227 aa13.44□□□□□ -0.26
PVT1-218ENST00000523328 TNFRSF6BO95407 300 aa13.43□□□□□ -0.26
PVT1-218ENST00000523328 ALKAL2Q6UX46 152 aa13.43□□□□□ -0.26
PVT1-218ENST00000523328 CKS2P33552 79 aa13.42□□□□□ -0.26
PVT1-218ENST00000523328 KRTAP9-6A0A140TA67 174 aa13.41□□□□□ -0.26
PVT1-218ENST00000523328 LINC00242Q5T6M2 205 aa13.41□□□□□ -0.26
PVT1-218ENST00000523328 EIF5A2Q9GZV4 153 aaKnown RBP13.41□□□□□ -0.26
PVT1-218ENST00000523328 FAM74A3Q4VXF1 159 aa13.4□□□□□ -0.26
PVT1-218ENST00000523328 A0A087X002 238 aa13.39□□□□□ -0.27
PVT1-218ENST00000523328 SRP19P09132 144 aaKnown RBP13.39□□□□□ -0.27
PVT1-218ENST00000523328 PACRGQ96M98 296 aaPredicted RBP13.39□□□□□ -0.27
PVT1-218ENST00000523328 NUPR1O60356 82 aa13.38□□□□□ -0.27
PVT1-218ENST00000523328 D6R8Y8 96 aa13.37□□□□□ -0.27
PVT1-218ENST00000523328 NPYP01303 97 aa13.37□□□□□ -0.27
PVT1-218ENST00000523328 SMIM27A0A1W2PRY6 76 aa13.36□□□□□ -0.27
PVT1-218ENST00000523328 C22orf24Q9Y442 160 aa13.36□□□□□ -0.27
PVT1-218ENST00000523328 IGLV4-3A0A075B6K6 122 aa13.35□□□□□ -0.27
PVT1-218ENST00000523328 A0A1B0GW15 77 aa13.35□□□□□ -0.27
PVT1-218ENST00000523328 IFI27P40305 119 aaPredicted RBP13.35□□□□□ -0.27
PVT1-218ENST00000523328 CTDSP1Q9GZU7 261 aa13.35□□□□□ -0.27
PVT1-218ENST00000523328 PYGO1Q9Y3Y4 419 aa13.35□□□□□ -0.27
PVT1-218ENST00000523328 RPL23P62829 140 aaKnown RBP13.34□□□□□ -0.27
PVT1-218ENST00000523328 LINC01561Q8N1V8 128 aa13.34□□□□□ -0.27
PVT1-218ENST00000523328 LINC00469Q8N7U9 141 aa13.32□□□□□ -0.28
PVT1-218ENST00000523328 MUC17Q685J3 4493 aa13.31□□□□□ -0.28
PVT1-218ENST00000523328 CRYGAP11844 174 aa13.31□□□□□ -0.28
PVT1-218ENST00000523328 TYMSOSQ8TAI1 123 aa13.31□□□□□ -0.28
PVT1-218ENST00000523328 TMEM141Q96I45 108 aa13.31□□□□□ -0.28
PVT1-218ENST00000523328 LBHQ53QV2 105 aaPredicted RBP13.3□□□□□ -0.28
PVT1-218ENST00000523328 XAGE1AQ9HD64 81 aa13.3□□□□□ -0.28
PVT1-218ENST00000523328 PPBPP02775 128 aa13.29□□□□□ -0.28
PVT1-218ENST00000523328 RAB5AP20339 215 aa13.29□□□□□ -0.28
PVT1-218ENST00000523328 ADIRFQ15847 76 aa13.29□□□□□ -0.28
PVT1-218ENST00000523328 MRPL54Q6P161 138 aaKnown RBP13.29□□□□□ -0.28
PVT1-218ENST00000523328 A0A1B0GXF2 115 aa13.28□□□□□ -0.28
PVT1-218ENST00000523328 F8W036 122 aa13.28□□□□□ -0.28
PVT1-218ENST00000523328 RPL28P46779 137 aaKnown RBP13.28□□□□□ -0.28
PVT1-218ENST00000523328 TEX43Q6ZNM6 134 aa13.28□□□□□ -0.28
PVT1-218ENST00000523328 BCE1O60756 84 aa13.27□□□□□ -0.29
PVT1-218ENST00000523328 LINC00173Q6ZV60 143 aa13.27□□□□□ -0.29
PVT1-218ENST00000523328 TOMM7Q9P0U1 55 aa13.27□□□□□ -0.29
PVT1-218ENST00000523328 TP73-AS1Q9UF72 201 aa13.27□□□□□ -0.29
PVT1-218ENST00000523328 S100A8P05109 93 aa13.26□□□□□ -0.29
PVT1-218ENST00000523328 PRSS2P07478 247 aa13.26□□□□□ -0.29
PVT1-218ENST00000523328 CKS1BP61024 79 aa13.26□□□□□ -0.29
PVT1-218ENST00000523328 ZC2HC1BQ5TFG8 222 aa13.26□□□□□ -0.29
PVT1-218ENST00000523328 Q6ZN92 141 aa13.26□□□□□ -0.29
PVT1-218ENST00000523328 MRPL55Q7Z7F7 128 aaKnown RBP13.26□□□□□ -0.29
PVT1-218ENST00000523328 RETNLBQ9BQ08 111 aa13.26□□□□□ -0.29
PVT1-218ENST00000523328 Q8IZM0 81 aa13.25□□□□□ -0.29
PVT1-218ENST00000523328 ANAPC11Q9NYG5 84 aa13.25□□□□□ -0.29
PVT1-218ENST00000523328 NAT8Q9UHE5 227 aa13.25□□□□□ -0.29
PVT1-218ENST00000523328 KRTAP13-2Q52LG2 175 aa13.24□□□□□ -0.29
PVT1-218ENST00000523328 C6orf226Q5I0X4 101 aa13.24□□□□□ -0.29
PVT1-218ENST00000523328 ORMDL3Q8N138 153 aa13.24□□□□□ -0.29
PVT1-218ENST00000523328 C2orf88Q9BSF0 95 aa13.24□□□□□ -0.29
PVT1-218ENST00000523328 PRELID3AQ96N28 172 aa13.23□□□□□ -0.29
PVT1-218ENST00000523328 AMELXQ99217 191 aa13.23□□□□□ -0.29
PVT1-218ENST00000523328 C9JQL5 133 aa13.22□□□□□ -0.29
PVT1-218ENST00000523328 TMEM136Q6ZRR5 245 aa13.22□□□□□ -0.29
PVT1-218ENST00000523328 PRSS47A8MTI9 375 aa13.21□□□□□ -0.29
PVT1-218ENST00000523328 TPRXLQ17RH7 258 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms