RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TM2D2Q9BX73 214 aa7.92□□□□□ -1.14
PVT1-215ENST00000522963 TRAV12-1A0A0B4J245 112 aa7.91□□□□□ -1.14
PVT1-215ENST00000522963 A0A0J9YXV3 536 aa7.91□□□□□ -1.14
PVT1-215ENST00000522963 EREGO14944 169 aa7.91□□□□□ -1.14
PVT1-215ENST00000522963 COX6A2Q02221 97 aa7.91□□□□□ -1.14
PVT1-215ENST00000522963 FOXI1Q12951 378 aa7.91□□□□□ -1.14
PVT1-215ENST00000522963 CD164L2Q6UWJ8 174 aa7.91□□□□□ -1.14
PVT1-215ENST00000522963 MAPKAPK5-AS1Q8N8E1 139 aa7.91□□□□□ -1.14
PVT1-215ENST00000522963 MAP1LC3CQ9BXW4 147 aa7.91□□□□□ -1.14
PVT1-215ENST00000522963 DNAH17Q9UFH2 4485 aa7.9□□□□□ -1.14
PVT1-215ENST00000522963 IGLV4-69A0A075B6H9 119 aa7.9□□□□□ -1.14
PVT1-215ENST00000522963 C3orf79P0CE67 100 aa7.9□□□□□ -1.14
PVT1-215ENST00000522963 ODF1Q14990 250 aa7.9□□□□□ -1.14
PVT1-215ENST00000522963 CHTOPQ9Y3Y2 248 aaKnown RBP7.9□□□□□ -1.14
PVT1-215ENST00000522963 COX11Q9Y6N1 276 aa7.9□□□□□ -1.14
PVT1-215ENST00000522963 IGHV3OR16-9A0A0B4J2B5 98 aa7.89□□□□□ -1.15
PVT1-215ENST00000522963 TINCRA0A1B0GVN0 87 aa7.89□□□□□ -1.15
PVT1-215ENST00000522963 C16orf90A8MZG2 172 aa7.89□□□□□ -1.15
PVT1-215ENST00000522963 SYS1-DBNDD2H3BUS1 97 aa7.89□□□□□ -1.15
PVT1-215ENST00000522963 IGLC3P0DOY3 106 aa7.89□□□□□ -1.15
PVT1-215ENST00000522963 FUSP35637 526 aaKnown RBP eCLIP7.89□□□□□ -1.15
PVT1-215ENST00000522963 KRTDAPP60985 99 aa7.89□□□□□ -1.15
PVT1-215ENST00000522963 KRTAP17-1Q9BYP8 105 aa7.89□□□□□ -1.15
PVT1-215ENST00000522963 MRPL35Q9NZE8 188 aaKnown RBP7.89□□□□□ -1.15
PVT1-215ENST00000522963 F8VRH5 84 aa7.88□□□□□ -1.15
PVT1-215ENST00000522963 HERVK_113P63121 156 aa7.88□□□□□ -1.15
PVT1-215ENST00000522963 SEC11AP67812 179 aa7.88□□□□□ -1.15
PVT1-215ENST00000522963 C5orf38Q86SI9 138 aa7.88□□□□□ -1.15
PVT1-215ENST00000522963 A0A087WTM6 91 aa7.87□□□□□ -1.15
PVT1-215ENST00000522963 C11orf86A6NJI1 115 aa7.87□□□□□ -1.15
PVT1-215ENST00000522963 KRTAP10-2P60368 255 aa7.87□□□□□ -1.15
PVT1-215ENST00000522963 PET117Q6UWS5 81 aa7.87□□□□□ -1.15
PVT1-215ENST00000522963 PMCHL2Q9BQD1 86 aa7.87□□□□□ -1.15
PVT1-215ENST00000522963 CHAC1Q9BUX1 264 aa7.87□□□□□ -1.15
PVT1-215ENST00000522963 GEMIN7Q9H840 131 aaKnown RBP7.87□□□□□ -1.15
PVT1-215ENST00000522963 CDKN2A-AS1Q9UH64 79 aa7.87□□□□□ -1.15
PVT1-215ENST00000522963 IGLV5-45A0A087WSX0 123 aa7.86□□□□□ -1.15
PVT1-215ENST00000522963 COX7A2LO14548 114 aa7.86□□□□□ -1.15
PVT1-215ENST00000522963 LECT2O14960 151 aa7.86□□□□□ -1.15
PVT1-215ENST00000522963 ZNF22P17026 224 aaPredicted RBP7.86□□□□□ -1.15
PVT1-215ENST00000522963 WFDC2Q14508 124 aa7.86□□□□□ -1.15
PVT1-215ENST00000522963 LINC01545Q5VT33 79 aa7.86□□□□□ -1.15
PVT1-215ENST00000522963 LINC00469Q8N7U9 141 aa7.86□□□□□ -1.15
PVT1-215ENST00000522963 OR10D4PQ8NGN7 298 aa7.86□□□□□ -1.15
PVT1-215ENST00000522963 A0A087WZ39 114 aa7.85□□□□□ -1.15
PVT1-215ENST00000522963 LRCOL1A6NCL2 159 aa7.85□□□□□ -1.15
PVT1-215ENST00000522963 FAT2Q9NYQ8 4349 aa7.84□□□□□ -1.15
PVT1-215ENST00000522963 USP17L23D6RBM5 183 aa7.84□□□□□ -1.15
PVT1-215ENST00000522963 DPM2O94777 84 aa7.84□□□□□ -1.15
PVT1-215ENST00000522963 MALP21145 153 aa7.84□□□□□ -1.15
PVT1-215ENST00000522963 C15orf56Q8N910 161 aa7.84□□□□□ -1.15
PVT1-215ENST00000522963 IGHV1-58A0A0C4DH39 117 aa7.83□□□□□ -1.16
PVT1-215ENST00000522963 IGKCP01834 107 aa7.83□□□□□ -1.16
PVT1-215ENST00000522963 PLNP26678 52 aa7.83□□□□□ -1.16
PVT1-215ENST00000522963 TMEM170BQ5T4T1 132 aa7.83□□□□□ -1.16
PVT1-215ENST00000522963 LINC01561Q8N1V8 128 aa7.83□□□□□ -1.16
PVT1-215ENST00000522963 IGHV3-64A0A075B6Q5 118 aa7.82□□□□□ -1.16
PVT1-215ENST00000522963 C20orf202A1L168 122 aa7.82□□□□□ -1.16
PVT1-215ENST00000522963 H3BRM9 83 aa7.82□□□□□ -1.16
PVT1-215ENST00000522963 SPINK8P0C7L1 97 aa7.82□□□□□ -1.16
PVT1-215ENST00000522963 CFAP161Q6P656 301 aa7.82□□□□□ -1.16
PVT1-215ENST00000522963 HECTD4Q9Y4D8 3996 aa7.82□□□□□ -1.16
PVT1-215ENST00000522963 SMIM1B2RUZ4 78 aa7.81□□□□□ -1.16
PVT1-215ENST00000522963 APOMO95445 188 aa7.81□□□□□ -1.16
PVT1-215ENST00000522963 HIGD2BQ4VC39 106 aa7.81□□□□□ -1.16
PVT1-215ENST00000522963 ORAOV1Q8WV07 137 aa7.81□□□□□ -1.16
PVT1-215ENST00000522963 PGPEP1Q9NXJ5 209 aa7.81□□□□□ -1.16
PVT1-215ENST00000522963 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.8□□□□□ -1.16
PVT1-215ENST00000522963 GVQW2A0A096LPI5 108 aaPredicted RBP7.8□□□□□ -1.16
PVT1-215ENST00000522963 TMEM223A0PJW6 202 aa7.8□□□□□ -1.16
PVT1-215ENST00000522963 Q8N814 137 aa7.8□□□□□ -1.16
PVT1-215ENST00000522963 LINC00526Q96FQ7 95 aa7.8□□□□□ -1.16
PVT1-215ENST00000522963 IGLV5-52A0A0A0MRZ9 124 aa7.79□□□□□ -1.16
PVT1-215ENST00000522963 IGLV5-39A0A0G2JS06 123 aa7.79□□□□□ -1.16
PVT1-215ENST00000522963 hDV102S1A0JD36 115 aa7.79□□□□□ -1.16
PVT1-215ENST00000522963 SPAG11BQ08648 103 aa7.79□□□□□ -1.16
PVT1-215ENST00000522963 KIAA0087Q14695 138 aa7.79□□□□□ -1.16
PVT1-215ENST00000522963 C14orf177Q52M58 125 aa7.79□□□□□ -1.16
PVT1-215ENST00000522963 ATOH7Q8N100 152 aa7.79□□□□□ -1.16
PVT1-215ENST00000522963 PKD1P98161 4303 aa7.79□□□□□ -1.16
PVT1-215ENST00000522963 DNAH11Q96DT5 4516 aa7.78□□□□□ -1.16
PVT1-215ENST00000522963 SCGB1D1O95968 90 aa7.78□□□□□ -1.16
PVT1-215ENST00000522963 CDPF1Q6NVV7 123 aa7.78□□□□□ -1.16
PVT1-215ENST00000522963 TOMM7Q9P0U1 55 aa7.78□□□□□ -1.16
PVT1-215ENST00000522963 ZNF561-AS1K7EIQ3 104 aa7.77□□□□□ -1.17
PVT1-215ENST00000522963 SLPIP03973 132 aa7.77□□□□□ -1.17
PVT1-215ENST00000522963 JOSD1Q15040 202 aaPredicted RBP7.77□□□□□ -1.17
PVT1-215ENST00000522963 STPG4Q8N801 248 aa7.77□□□□□ -1.17
PVT1-215ENST00000522963 GCSHP23434 173 aa7.76□□□□□ -1.17
PVT1-215ENST00000522963 AKR1D1P51857 326 aa7.76□□□□□ -1.17
PVT1-215ENST00000522963 HERVK_113P61574 105 aa7.76□□□□□ -1.17
PVT1-215ENST00000522963 Q8IZM0 81 aa7.76□□□□□ -1.17
PVT1-215ENST00000522963 COX7B2Q8TF08 81 aa7.76□□□□□ -1.17
PVT1-215ENST00000522963 NTN5Q8WTR8 489 aaPredicted RBP7.76□□□□□ -1.17
PVT1-215ENST00000522963 PKHD1P08F94 4074 aa7.75□□□□□ -1.17
PVT1-215ENST00000522963 PRSS2P07478 247 aa7.75□□□□□ -1.17
PVT1-215ENST00000522963 KRTAP10-1P60331 282 aa7.75□□□□□ -1.17
PVT1-215ENST00000522963 C6orf226Q5I0X4 101 aa7.75□□□□□ -1.17
PVT1-215ENST00000522963 C2orf48Q96LS8 159 aa7.75□□□□□ -1.17
PVT1-215ENST00000522963 E9PLD3 99 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms