RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 DPH3P1Q9H4G8 78 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 HHLA3Q9XRX5 114 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 IGHV3-38A0A0C4DH36 116 aa4.24□□□□□ -1.73
SDCBP-210ENST00000522843 TRBV6-5A0A0K0K1A5 114 aa4.24□□□□□ -1.73
SDCBP-210ENST00000522843 A8MWV9 139 aa4.24□□□□□ -1.73
SDCBP-210ENST00000522843 K7EMI3 77 aa4.24□□□□□ -1.73
SDCBP-210ENST00000522843 LINC00614P0C842 121 aa4.24□□□□□ -1.73
SDCBP-210ENST00000522843 CKS2P33552 79 aa4.24□□□□□ -1.73
SDCBP-210ENST00000522843 ZNF876PQ49A33 203 aa4.24□□□□□ -1.73
SDCBP-210ENST00000522843 NIT1Q86X76 327 aa4.24□□□□□ -1.73
SDCBP-210ENST00000522843 PRELID3AQ96N28 172 aa4.24□□□□□ -1.73
SDCBP-210ENST00000522843 AP1S3Q96PC3 154 aa4.24□□□□□ -1.73
SDCBP-210ENST00000522843 MRPL16Q9NX20 251 aaKnown RBP4.24□□□□□ -1.73
SDCBP-210ENST00000522843 IGLV5-45A0A087WSX0 123 aa4.23□□□□□ -1.73
SDCBP-210ENST00000522843 MUC21A0A0G2JKD1 596 aa4.23□□□□□ -1.73
SDCBP-210ENST00000522843 LOC100131303A0A0U1RQF7 123 aa4.23□□□□□ -1.73
SDCBP-210ENST00000522843 MUC21A0A140T8X8 626 aa4.23□□□□□ -1.73
SDCBP-210ENST00000522843 D6R8Y8 96 aa4.23□□□□□ -1.73
SDCBP-210ENST00000522843 NUPR1O60356 82 aa4.23□□□□□ -1.73
SDCBP-210ENST00000522843 POLR2KP53803 58 aaKnown RBP4.23□□□□□ -1.73
SDCBP-210ENST00000522843 BAGE3Q86Y29 109 aa4.23□□□□□ -1.73
SDCBP-210ENST00000522843 C14orf178Q8N769 122 aaPredicted RBP4.23□□□□□ -1.73
SDCBP-210ENST00000522843 BAALCQ8WXS3 180 aa4.23□□□□□ -1.73
SDCBP-210ENST00000522843 PANO1I0J062 215 aa4.22□□□□□ -1.73
SDCBP-210ENST00000522843 M0QY20 66 aa4.22□□□□□ -1.73
SDCBP-210ENST00000522843 SERF1AO75920 110 aa4.22□□□□□ -1.73
SDCBP-210ENST00000522843 IGHV3-30P01768 117 aa4.22□□□□□ -1.73
SDCBP-210ENST00000522843 IGHV3-33P01772 117 aa4.22□□□□□ -1.73
SDCBP-210ENST00000522843 SMIM17P0DL12 118 aa4.22□□□□□ -1.73
SDCBP-210ENST00000522843 IGHV3-30-3P0DP02 117 aa4.22□□□□□ -1.73
SDCBP-210ENST00000522843 IGHV3-30-5P0DP03 117 aa4.22□□□□□ -1.73
SDCBP-210ENST00000522843 SSTP61278 116 aa4.22□□□□□ -1.73
SDCBP-210ENST00000522843 RPL24P83731 157 aaKnown RBP4.22□□□□□ -1.73
SDCBP-210ENST00000522843 CFAP126Q5VTH2 177 aa4.22□□□□□ -1.73
SDCBP-210ENST00000522843 Q8N8P6 123 aa4.22□□□□□ -1.73
SDCBP-210ENST00000522843 LINC01600Q96MT4 127 aa4.22□□□□□ -1.73
SDCBP-210ENST00000522843 HIST1H2BLQ99880 126 aa4.22□□□□□ -1.73
SDCBP-210ENST00000522843 NXT2Q9NPJ8 142 aaKnown RBP4.22□□□□□ -1.73
SDCBP-210ENST00000522843 NPYP01303 97 aa4.21□□□□□ -1.74
SDCBP-210ENST00000522843 KRTAP10-8P60410 259 aa4.21□□□□□ -1.74
SDCBP-210ENST00000522843 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
SDCBP-210ENST00000522843 DNAJC30Q96LL9 226 aa4.21□□□□□ -1.74
SDCBP-210ENST00000522843 SAMD10Q9BYL1 202 aa4.21□□□□□ -1.74
SDCBP-210ENST00000522843 JPT2Q9H910 190 aa4.21□□□□□ -1.74
SDCBP-210ENST00000522843 NIT2Q9NQR4 276 aa4.21□□□□□ -1.74
SDCBP-210ENST00000522843 TRAV4A0A0B4J268 109 aa4.2□□□□□ -1.74
SDCBP-210ENST00000522843 TRBV10-1A0A0K0K1A3 114 aa4.2□□□□□ -1.74
SDCBP-210ENST00000522843 TRBV27A0A0K0K1C4 114 aa4.2□□□□□ -1.74
SDCBP-210ENST00000522843 LINC01549A6NIU2 74 aa4.2□□□□□ -1.74
SDCBP-210ENST00000522843 H7C1H1 209 aa4.2□□□□□ -1.74
SDCBP-210ENST00000522843 TCAPO15273 167 aa4.2□□□□□ -1.74
SDCBP-210ENST00000522843 G0S2P27469 103 aa4.2□□□□□ -1.74
SDCBP-210ENST00000522843 S100A2P29034 98 aa4.2□□□□□ -1.74
SDCBP-210ENST00000522843 IFI27P40305 119 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-210ENST00000522843 LAGE3Q14657 143 aa4.2□□□□□ -1.74
SDCBP-210ENST00000522843 MAP1LC3AQ9H492 121 aa4.2□□□□□ -1.74
SDCBP-210ENST00000522843 TRGV4A0A0C4DH28 118 aa4.19□□□□□ -1.74
SDCBP-210ENST00000522843 TRBV6-4A0A1B0GX49 114 aa4.19□□□□□ -1.74
SDCBP-210ENST00000522843 SMKR1H3BMG3 65 aa4.19□□□□□ -1.74
SDCBP-210ENST00000522843 HSBP1O75506 76 aa4.19□□□□□ -1.74
SDCBP-210ENST00000522843 GATA1P15976 413 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-210ENST00000522843 FCER1GP30273 86 aa4.19□□□□□ -1.74
SDCBP-210ENST00000522843 JOSD1Q15040 202 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-210ENST00000522843 IQCJQ1A5X6 159 aa4.19□□□□□ -1.74
SDCBP-210ENST00000522843 ST20Q9HBF5 79 aa4.19□□□□□ -1.74
SDCBP-210ENST00000522843 A0A096LNJ9 63 aa4.18□□□□□ -1.74
SDCBP-210ENST00000522843 TRAV26-2A0A0B4J265 109 aa4.18□□□□□ -1.74
SDCBP-210ENST00000522843 FABP4P15090 132 aa4.18□□□□□ -1.74
SDCBP-210ENST00000522843 ORMDL2Q53FV1 153 aa4.18□□□□□ -1.74
SDCBP-210ENST00000522843 PDZD11Q5EBL8 140 aa4.18□□□□□ -1.74
SDCBP-210ENST00000522843 FA2HQ7L5A8 372 aa4.18□□□□□ -1.74
SDCBP-210ENST00000522843 SMIM29Q86T20 159 aa4.18□□□□□ -1.74
SDCBP-210ENST00000522843 OR4C5Q8NGB2 326 aa4.18□□□□□ -1.74
SDCBP-210ENST00000522843 OR10D4PQ8NGN7 298 aa4.18□□□□□ -1.74
SDCBP-210ENST00000522843 SMIM2Q9BVW6 85 aa4.18□□□□□ -1.74
SDCBP-210ENST00000522843 IGHV1-24A0A0C4DH33 117 aa4.17□□□□□ -1.74
SDCBP-210ENST00000522843 A0A0J9YXV3 536 aa4.17□□□□□ -1.74
SDCBP-210ENST00000522843 LOC389332A0A1B0GUA5 103 aa4.17□□□□□ -1.74
SDCBP-210ENST00000522843 SDHAF1A6NFY7 115 aa4.17□□□□□ -1.74
SDCBP-210ENST00000522843 I3L3M4 83 aa4.17□□□□□ -1.74
SDCBP-210ENST00000522843 NCR2O95944 276 aa4.17□□□□□ -1.74
SDCBP-210ENST00000522843 HBDP02042 147 aa4.17□□□□□ -1.74
SDCBP-210ENST00000522843 SMIM6P0DI80 62 aa4.17□□□□□ -1.74
SDCBP-210ENST00000522843 LBHQ53QV2 105 aaPredicted RBP4.17□□□□□ -1.74
SDCBP-210ENST00000522843 DAZ4Q86SG3 579 aaKnown RBP4.17□□□□□ -1.74
SDCBP-210ENST00000522843 LINC00518Q8N0U6 118 aa4.17□□□□□ -1.74
SDCBP-210ENST00000522843 FAM19A2Q8N3H0 131 aa4.17□□□□□ -1.74
SDCBP-210ENST00000522843 Q8N976 141 aa4.17□□□□□ -1.74
SDCBP-210ENST00000522843 RPL39LQ96EH5 51 aaKnown RBP4.17□□□□□ -1.74
SDCBP-210ENST00000522843 DAZ3Q9NR90 486 aaKnown RBP4.17□□□□□ -1.74
SDCBP-210ENST00000522843 CRCT1Q9UGL9 99 aa4.17□□□□□ -1.74
SDCBP-210ENST00000522843 HSPB8Q9UJY1 196 aa4.17□□□□□ -1.74
SDCBP-210ENST00000522843 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
SDCBP-210ENST00000522843 TRBV7-3A0A075B6L6 115 aa4.16□□□□□ -1.74
SDCBP-210ENST00000522843 TRAV8-6A0A0B4J262 113 aa4.16□□□□□ -1.74
SDCBP-210ENST00000522843 LEPROTL1O95214 131 aa4.16□□□□□ -1.74
SDCBP-210ENST00000522843 MGPP08493 103 aa4.16□□□□□ -1.74
SDCBP-210ENST00000522843 AKR1D1P51857 326 aa4.16□□□□□ -1.74
SDCBP-210ENST00000522843 RHOHQ15669 191 aa4.16□□□□□ -1.74
SDCBP-210ENST00000522843 PYY3Q5JQD4 70 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms