RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 VCYO14598 125 aa6.55□□□□□ -1.36
CTNNA1-235ENST00000522730 IFI27P40305 119 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-235ENST00000522730 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-235ENST00000522730 Q8N8P6 123 aa6.55□□□□□ -1.36
CTNNA1-235ENST00000522730 CHCHD10Q8WYQ3 142 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-235ENST00000522730 OXTP01178 125 aa6.54□□□□□ -1.36
CTNNA1-235ENST00000522730 FGF6P10767 208 aa6.54□□□□□ -1.36
CTNNA1-235ENST00000522730 HNRNPA3P51991 378 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-235ENST00000522730 BAGE3Q86Y29 109 aa6.54□□□□□ -1.36
CTNNA1-235ENST00000522730 PRSS3P2Q8NHM4 247 aa6.54□□□□□ -1.36
CTNNA1-235ENST00000522730 URB1-AS1Q96HZ7 61 aa6.54□□□□□ -1.36
CTNNA1-235ENST00000522730 TMEM101Q96IK0 257 aa6.54□□□□□ -1.36
CTNNA1-235ENST00000522730 NXT2Q9NPJ8 142 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-235ENST00000522730 PKHD1L1Q86WI1 4243 aa6.54□□□□□ -1.36
CTNNA1-235ENST00000522730 A0A087WYN8 130 aa6.53□□□□□ -1.36
CTNNA1-235ENST00000522730 IGKV2-24A0A0C4DH68 120 aa6.53□□□□□ -1.36
CTNNA1-235ENST00000522730 LINC01546A6NGU7 62 aa6.53□□□□□ -1.36
CTNNA1-235ENST00000522730 TCAPO15273 167 aa6.53□□□□□ -1.36
CTNNA1-235ENST00000522730 TSHBP01222 138 aa6.53□□□□□ -1.36
CTNNA1-235ENST00000522730 LINC00614P0C842 121 aa6.53□□□□□ -1.36
CTNNA1-235ENST00000522730 XCL1P47992 114 aa6.53□□□□□ -1.36
CTNNA1-235ENST00000522730 NDUFA6P56556 154 aa6.53□□□□□ -1.36
CTNNA1-235ENST00000522730 COX6A2Q02221 97 aa6.53□□□□□ -1.36
CTNNA1-235ENST00000522730 FA2HQ7L5A8 372 aa6.53□□□□□ -1.36
CTNNA1-235ENST00000522730 C15orf56Q8N910 161 aa6.53□□□□□ -1.36
CTNNA1-235ENST00000522730 KIR2DL4Q99706 377 aa6.53□□□□□ -1.36
CTNNA1-235ENST00000522730 SERF1AO75920 110 aa6.52□□□□□ -1.37
CTNNA1-235ENST00000522730 FCER1GP30273 86 aa6.52□□□□□ -1.37
CTNNA1-235ENST00000522730 MAJINQ3KP22 176 aa6.52□□□□□ -1.37
CTNNA1-235ENST00000522730 OR5A1Q8NGJ0 315 aa6.52□□□□□ -1.37
CTNNA1-235ENST00000522730 LINC00526Q96FQ7 95 aa6.52□□□□□ -1.37
CTNNA1-235ENST00000522730 H7C423 109 aa6.51□□□□□ -1.37
CTNNA1-235ENST00000522730 K7EMI3 77 aa6.51□□□□□ -1.37
CTNNA1-235ENST00000522730 CCL25O15444 150 aa6.51□□□□□ -1.37
CTNNA1-235ENST00000522730 NUPR1O60356 82 aa6.51□□□□□ -1.37
CTNNA1-235ENST00000522730 LINC00310P59036 64 aa6.51□□□□□ -1.37
CTNNA1-235ENST00000522730 COA6Q5JTJ3 125 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-235ENST00000522730 SERTAD4-AS1Q5TG53 156 aa6.51□□□□□ -1.37
CTNNA1-235ENST00000522730 CHCHD1Q96BP2 118 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-235ENST00000522730 TMA7Q9Y2S6 64 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-235ENST00000522730 HMCN2Q8NDA2 5059 aa6.51□□□□□ -1.37
CTNNA1-235ENST00000522730 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
CTNNA1-235ENST00000522730 FOXI1Q12951 378 aa6.5□□□□□ -1.37
CTNNA1-235ENST00000522730 ORMDL2Q53FV1 153 aa6.5□□□□□ -1.37
CTNNA1-235ENST00000522730 SPACA4Q8TDM5 124 aa6.5□□□□□ -1.37
CTNNA1-235ENST00000522730 HSBP1O75506 76 aa6.49□□□□□ -1.37
CTNNA1-235ENST00000522730 S100A6P06703 90 aa6.49□□□□□ -1.37
CTNNA1-235ENST00000522730 ESDP10768 282 aa6.49□□□□□ -1.37
CTNNA1-235ENST00000522730 ZNF25P17030 456 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-235ENST00000522730 SS18Q15532 418 aa6.49□□□□□ -1.37
CTNNA1-235ENST00000522730 C7orf33Q8WU49 177 aa6.49□□□□□ -1.37
CTNNA1-235ENST00000522730 UBR4Q5T4S7 5183 aa6.48□□□□□ -1.37
CTNNA1-235ENST00000522730 CIRBPQ14011 172 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-235ENST00000522730 PMCHL1Q16048 86 aa6.48□□□□□ -1.37
CTNNA1-235ENST00000522730 ZNF664Q8N3J9 261 aa6.48□□□□□ -1.37
CTNNA1-235ENST00000522730 STPG4Q8N801 248 aa6.48□□□□□ -1.37
CTNNA1-235ENST00000522730 A0A096LNJ9 63 aa6.47□□□□□ -1.37
CTNNA1-235ENST00000522730 GVQW2A0A096LPI5 108 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-235ENST00000522730 IGHV1-58A0A0C4DH39 117 aa6.47□□□□□ -1.37
CTNNA1-235ENST00000522730 ZNF561-AS1K7EIQ3 104 aa6.47□□□□□ -1.37
CTNNA1-235ENST00000522730 HBDP02042 147 aa6.47□□□□□ -1.37
CTNNA1-235ENST00000522730 G0S2P27469 103 aa6.47□□□□□ -1.37
CTNNA1-235ENST00000522730 RPL39P62891 51 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-235ENST00000522730 RNASE13Q5GAN3 156 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-235ENST00000522730 C2orf66Q6UXQ4 117 aa6.47□□□□□ -1.37
CTNNA1-235ENST00000522730 FAM19A2Q8N3H0 131 aa6.47□□□□□ -1.37
CTNNA1-235ENST00000522730 CDC42SE2Q9NRR3 84 aa6.47□□□□□ -1.37
CTNNA1-235ENST00000522730 PLAC8Q9NZF1 115 aa6.47□□□□□ -1.37
CTNNA1-235ENST00000522730 PLA2G2DQ9UNK4 145 aa6.47□□□□□ -1.37
CTNNA1-235ENST00000522730 A0A096LNI7 61 aa6.46□□□□□ -1.38
CTNNA1-235ENST00000522730 MALP21145 153 aa6.46□□□□□ -1.38
CTNNA1-235ENST00000522730 SNRPEP62304 92 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-235ENST00000522730 PDZD11Q5EBL8 140 aa6.46□□□□□ -1.38
CTNNA1-235ENST00000522730 TMEM18Q96B42 140 aa6.46□□□□□ -1.38
CTNNA1-235ENST00000522730 TOMM6Q96B49 74 aa6.46□□□□□ -1.38
CTNNA1-235ENST00000522730 CYSLTR1Q9Y271 337 aa6.46□□□□□ -1.38
CTNNA1-235ENST00000522730 TRAV13-1A0A0B4J241 112 aa6.45□□□□□ -1.38
CTNNA1-235ENST00000522730 C5orf52A6NGY3 159 aa6.45□□□□□ -1.38
CTNNA1-235ENST00000522730 CD164L2Q6UWJ8 174 aa6.45□□□□□ -1.38
CTNNA1-235ENST00000522730 Q6ZRU5 148 aa6.45□□□□□ -1.38
CTNNA1-235ENST00000522730 HIST3H2BBQ8N257 126 aa6.45□□□□□ -1.38
CTNNA1-235ENST00000522730 CARD19Q96LW7 228 aa6.45□□□□□ -1.38
CTNNA1-235ENST00000522730 LINC01549A6NIU2 74 aa6.44□□□□□ -1.38
CTNNA1-235ENST00000522730 SYCNQ0VAF6 134 aa6.44□□□□□ -1.38
CTNNA1-235ENST00000522730 GAGE2BQ13066 116 aa6.44□□□□□ -1.38
CTNNA1-235ENST00000522730 MRPL52Q86TS9 123 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-235ENST00000522730 SCGB3A1Q96QR1 104 aa6.44□□□□□ -1.38
CTNNA1-235ENST00000522730 SPANXA1Q9NS26 97 aa6.44□□□□□ -1.38
CTNNA1-235ENST00000522730 UBE2D4Q9Y2X8 147 aa6.44□□□□□ -1.38
CTNNA1-235ENST00000522730 IGIPA6NJ69 53 aa6.43□□□□□ -1.38
CTNNA1-235ENST00000522730 COX7A2LO14548 114 aa6.43□□□□□ -1.38
CTNNA1-235ENST00000522730 LEPROTL1O95214 131 aa6.43□□□□□ -1.38
CTNNA1-235ENST00000522730 S100A2P29034 98 aa6.43□□□□□ -1.38
CTNNA1-235ENST00000522730 SMAGPQ0VAQ4 97 aa6.43□□□□□ -1.38
CTNNA1-235ENST00000522730 C5orf38Q86SI9 138 aa6.43□□□□□ -1.38
CTNNA1-235ENST00000522730 PACRGQ96M98 296 aaPredicted RBP6.43□□□□□ -1.38
CTNNA1-235ENST00000522730 TIMM21Q9BVV7 248 aa6.43□□□□□ -1.38
CTNNA1-235ENST00000522730 LINC00474Q9P2X8 69 aa6.43□□□□□ -1.38
CTNNA1-235ENST00000522730 PYGO1Q9Y3Y4 419 aa6.43□□□□□ -1.38
CTNNA1-235ENST00000522730 IGLV4-69A0A075B6H9 119 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms