RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 RPL18AQ02543 176 aaKnown RBP9.26□□□□□ -0.93
TRAPPC9-213ENST00000522504 C5orf38Q86SI9 138 aa9.26□□□□□ -0.93
TRAPPC9-213ENST00000522504 SMKR1H3BMG3 65 aa9.25□□□□□ -0.93
TRAPPC9-213ENST00000522504 RAB4AP20338 218 aa9.25□□□□□ -0.93
TRAPPC9-213ENST00000522504 C2orf48Q96LS8 159 aa9.25□□□□□ -0.93
TRAPPC9-213ENST00000522504 UBE2D4Q9Y2X8 147 aa9.25□□□□□ -0.93
TRAPPC9-213ENST00000522504 TRAV13-1A0A0B4J241 112 aa9.24□□□□□ -0.93
TRAPPC9-213ENST00000522504 FAM168BA1KXE4 195 aa9.24□□□□□ -0.93
TRAPPC9-213ENST00000522504 S100PP25815 95 aa9.24□□□□□ -0.93
TRAPPC9-213ENST00000522504 AMN1Q8IY45 258 aa9.24□□□□□ -0.93
TRAPPC9-213ENST00000522504 IMMP2LQ96T52 175 aa9.24□□□□□ -0.93
TRAPPC9-213ENST00000522504 TMEM191AQ9H0A3 160 aa9.24□□□□□ -0.93
TRAPPC9-213ENST00000522504 A0A1B0GUT8 65 aa9.23□□□□□ -0.93
TRAPPC9-213ENST00000522504 IGLV7-43P04211 117 aa9.23□□□□□ -0.93
TRAPPC9-213ENST00000522504 SPAG11BQ08648 103 aa9.22□□□□□ -0.93
TRAPPC9-213ENST00000522504 RIGQ13278 110 aa9.22□□□□□ -0.93
TRAPPC9-213ENST00000522504 MRPL54Q6P161 138 aaKnown RBP9.22□□□□□ -0.93
TRAPPC9-213ENST00000522504 Q6ZUT4 128 aa9.22□□□□□ -0.93
TRAPPC9-213ENST00000522504 NRACQ8N912 160 aa9.22□□□□□ -0.93
TRAPPC9-213ENST00000522504 CSDC2Q9Y534 153 aaKnown RBP9.22□□□□□ -0.93
TRAPPC9-213ENST00000522504 FAT4Q6V0I7 4981 aa9.21□□□□□ -0.93
TRAPPC9-213ENST00000522504 VCYO14598 125 aa9.21□□□□□ -0.94
TRAPPC9-213ENST00000522504 CBLN2Q8IUK8 224 aa9.21□□□□□ -0.94
TRAPPC9-213ENST00000522504 DIRC1Q969H9 104 aa9.21□□□□□ -0.94
TRAPPC9-213ENST00000522504 FAM104AQ969W3 186 aa9.21□□□□□ -0.94
TRAPPC9-213ENST00000522504 TRAV9-1A0A075B6T8 112 aa9.2□□□□□ -0.94
TRAPPC9-213ENST00000522504 A0A087WZ39 114 aa9.2□□□□□ -0.94
TRAPPC9-213ENST00000522504 H0Y9J4 135 aa9.2□□□□□ -0.94
TRAPPC9-213ENST00000522504 KRTAP1-4P0C5Y4 121 aa9.2□□□□□ -0.94
TRAPPC9-213ENST00000522504 FCER1GP30273 86 aa9.2□□□□□ -0.94
TRAPPC9-213ENST00000522504 RNF151Q2KHN1 245 aa9.2□□□□□ -0.94
TRAPPC9-213ENST00000522504 C10orf25Q5T742 122 aa9.2□□□□□ -0.94
TRAPPC9-213ENST00000522504 KRTAP7-1Q8IUC3 87 aa9.2□□□□□ -0.94
TRAPPC9-213ENST00000522504 SMCO4Q9NRQ5 59 aa9.2□□□□□ -0.94
TRAPPC9-213ENST00000522504 SCO1O75880 301 aa9.19□□□□□ -0.94
TRAPPC9-213ENST00000522504 HBBP68871 147 aa9.19□□□□□ -0.94
TRAPPC9-213ENST00000522504 ATP5L2Q7Z4Y8 100 aa9.19□□□□□ -0.94
TRAPPC9-213ENST00000522504 A0A1B0GW15 77 aa9.18□□□□□ -0.94
TRAPPC9-213ENST00000522504 A0A1B0GXF2 115 aa9.18□□□□□ -0.94
TRAPPC9-213ENST00000522504 S100A8P05109 93 aa9.18□□□□□ -0.94
TRAPPC9-213ENST00000522504 SUMO2P61956 95 aaKnown RBP9.18□□□□□ -0.94
TRAPPC9-213ENST00000522504 MRPL35Q9NZE8 188 aaKnown RBP9.18□□□□□ -0.94
TRAPPC9-213ENST00000522504 TGIF2-C20orf24A0A0A6YYL0 155 aa9.17□□□□□ -0.94
TRAPPC9-213ENST00000522504 OR10D4PQ8NGN7 298 aa9.17□□□□□ -0.94
TRAPPC9-213ENST00000522504 ORAOV1Q8WV07 137 aa9.17□□□□□ -0.94
TRAPPC9-213ENST00000522504 IGHV3OR16-9A0A0B4J2B5 98 aa9.16□□□□□ -0.94
TRAPPC9-213ENST00000522504 RPL39P62891 51 aaKnown RBP9.16□□□□□ -0.94
TRAPPC9-213ENST00000522504 UNQ6190/PRO20217Q6UXQ8 127 aa9.16□□□□□ -0.94
TRAPPC9-213ENST00000522504 FAM19A5Q7Z5A7 132 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC9-213ENST00000522504 TIMM21Q9BVV7 248 aa9.16□□□□□ -0.94
TRAPPC9-213ENST00000522504 C6orf48Q9UBA6 75 aa9.16□□□□□ -0.94
TRAPPC9-213ENST00000522504 IGLV1-50A0A075B6I6 118 aa9.15□□□□□ -0.94
TRAPPC9-213ENST00000522504 YPEL4Q96NS1 127 aa9.15□□□□□ -0.94
TRAPPC9-213ENST00000522504 KIR2DL4Q99706 377 aa9.15□□□□□ -0.94
TRAPPC9-213ENST00000522504 TRBV24-1A0A075B6N3 115 aa9.14□□□□□ -0.95
TRAPPC9-213ENST00000522504 TLX1NBP0CAT3 122 aa9.14□□□□□ -0.95
TRAPPC9-213ENST00000522504 PRR4Q16378 134 aa9.14□□□□□ -0.95
TRAPPC9-213ENST00000522504 MRPL51Q4U2R6 128 aaKnown RBP9.14□□□□□ -0.95
TRAPPC9-213ENST00000522504 GAGE2EQ4V326 116 aa9.14□□□□□ -0.95
TRAPPC9-213ENST00000522504 GAGE2DQ9UEU5 116 aa9.14□□□□□ -0.95
TRAPPC9-213ENST00000522504 NDUFA1O15239 70 aa9.13□□□□□ -0.95
TRAPPC9-213ENST00000522504 SMAGPQ0VAQ4 97 aa9.13□□□□□ -0.95
TRAPPC9-213ENST00000522504 COX19Q49B96 90 aa9.13□□□□□ -0.95
TRAPPC9-213ENST00000522504 TMEM136Q6ZRR5 245 aa9.13□□□□□ -0.95
TRAPPC9-213ENST00000522504 KRTAP9-2Q9BYQ4 174 aa9.13□□□□□ -0.95
TRAPPC9-213ENST00000522504 PPP1R17O96001 155 aa9.12□□□□□ -0.95
TRAPPC9-213ENST00000522504 FAM104BQ5XKR9 115 aa9.12□□□□□ -0.95
TRAPPC9-213ENST00000522504 F8WDY8 70 aa9.11□□□□□ -0.95
TRAPPC9-213ENST00000522504 KIAA0087Q14695 138 aa9.11□□□□□ -0.95
TRAPPC9-213ENST00000522504 GNB1LQ9BYB4 327 aa9.11□□□□□ -0.95
TRAPPC9-213ENST00000522504 M0QXV9 152 aa9.1□□□□□ -0.95
TRAPPC9-213ENST00000522504 TMEM18Q96B42 140 aa9.1□□□□□ -0.95
TRAPPC9-213ENST00000522504 COLCA2A8K830 154 aa9.09□□□□□ -0.95
TRAPPC9-213ENST00000522504 C9orf129Q5T035 196 aaKnown RBP9.09□□□□□ -0.95
TRAPPC9-213ENST00000522504 C20orf78Q9BR46 151 aa9.09□□□□□ -0.95
TRAPPC9-213ENST00000522504 MRPL18Q9H0U6 180 aaKnown RBP9.09□□□□□ -0.95
TRAPPC9-213ENST00000522504 IFITM10A6NMD0 228 aa9.08□□□□□ -0.96
TRAPPC9-213ENST00000522504 D6R8Y8 96 aa9.08□□□□□ -0.96
TRAPPC9-213ENST00000522504 CKS2P33552 79 aa9.08□□□□□ -0.96
TRAPPC9-213ENST00000522504 UBE2D1P51668 147 aa9.08□□□□□ -0.96
TRAPPC9-213ENST00000522504 RPL32P62910 135 aaKnown RBP9.08□□□□□ -0.96
TRAPPC9-213ENST00000522504 UBE2BP63146 152 aa9.08□□□□□ -0.96
TRAPPC9-213ENST00000522504 MRPS36P82909 103 aaKnown RBP9.08□□□□□ -0.96
TRAPPC9-213ENST00000522504 C2orf82Q6UX34 121 aa9.08□□□□□ -0.96
TRAPPC9-213ENST00000522504 TRAPPC1Q9Y5R8 145 aa9.08□□□□□ -0.96
TRAPPC9-213ENST00000522504 TNFRSF6BO95407 300 aa9.07□□□□□ -0.96
TRAPPC9-213ENST00000522504 RAB5AP20339 215 aa9.07□□□□□ -0.96
TRAPPC9-213ENST00000522504 FABP9Q0Z7S8 132 aa9.07□□□□□ -0.96
TRAPPC9-213ENST00000522504 KIAA1644Q3SXP7 199 aa9.07□□□□□ -0.96
TRAPPC9-213ENST00000522504 SPANXA1Q9NS26 97 aa9.07□□□□□ -0.96
TRAPPC9-213ENST00000522504 TCAPO15273 167 aa9.06□□□□□ -0.96
TRAPPC9-213ENST00000522504 ORMDL3Q8N138 153 aa9.06□□□□□ -0.96
TRAPPC9-213ENST00000522504 SMIM2Q9BVW6 85 aa9.06□□□□□ -0.96
TRAPPC9-213ENST00000522504 MUC17Q685J3 4493 aa9.05□□□□□ -0.96
TRAPPC9-213ENST00000522504 NPYP01303 97 aa9.05□□□□□ -0.96
TRAPPC9-213ENST00000522504 PPBPP02775 128 aa9.05□□□□□ -0.96
TRAPPC9-213ENST00000522504 RPL13AP40429 203 aaKnown RBP9.05□□□□□ -0.96
TRAPPC9-213ENST00000522504 PRELID3AQ96N28 172 aa9.05□□□□□ -0.96
TRAPPC9-213ENST00000522504 NDUFC2-KCTD14E9PQ53 114 aa9.04□□□□□ -0.96
TRAPPC9-213ENST00000522504 TSPAN13O95857 204 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms