RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 SPAG11AQ6PDA7 123 aa6.1□□□□□ -1.43
CTNNA1-234ENST00000522227 TRBV30A0A0K0K1B3 111 aa6.09□□□□□ -1.43
CTNNA1-234ENST00000522227 RPL35P42766 123 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-234ENST00000522227 COX6B2Q6YFQ2 88 aa6.09□□□□□ -1.43
CTNNA1-234ENST00000522227 SMIM15Q7Z3B0 74 aa6.09□□□□□ -1.43
CTNNA1-234ENST00000522227 LINC00167Q96N53 147 aa6.09□□□□□ -1.43
CTNNA1-234ENST00000522227 MACF1Q9UPN3 7388 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-234ENST00000522227 IGHV3OR16-9A0A0B4J2B5 98 aa6.08□□□□□ -1.44
CTNNA1-234ENST00000522227 ZNF727A8MUV8 499 aa6.08□□□□□ -1.44
CTNNA1-234ENST00000522227 FCER1GP30273 86 aa6.08□□□□□ -1.44
CTNNA1-234ENST00000522227 KIAA0087Q14695 138 aa6.08□□□□□ -1.44
CTNNA1-234ENST00000522227 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
CTNNA1-234ENST00000522227 ENKURQ8TC29 256 aa6.08□□□□□ -1.44
CTNNA1-234ENST00000522227 TRBV6-5A0A0K0K1A5 114 aa6.07□□□□□ -1.44
CTNNA1-234ENST00000522227 UPK1BO75841 260 aa6.07□□□□□ -1.44
CTNNA1-234ENST00000522227 PRLHP81277 87 aa6.07□□□□□ -1.44
CTNNA1-234ENST00000522227 CENPWQ5EE01 88 aa6.07□□□□□ -1.44
CTNNA1-234ENST00000522227 TEX261Q6UWH6 196 aa6.07□□□□□ -1.44
CTNNA1-234ENST00000522227 KRTAP19-1Q8IUB9 90 aa6.07□□□□□ -1.44
CTNNA1-234ENST00000522227 C9orf62Q8N4C0 152 aa6.07□□□□□ -1.44
CTNNA1-234ENST00000522227 BORCS7-ASMTA0A0B4J1R7 106 aa6.06□□□□□ -1.44
CTNNA1-234ENST00000522227 RAB19A4D1S5 217 aa6.05□□□□□ -1.44
CTNNA1-234ENST00000522227 POLR2KP53803 58 aaKnown RBP6.05□□□□□ -1.44
CTNNA1-234ENST00000522227 Q8NBF4 154 aa6.05□□□□□ -1.44
CTNNA1-234ENST00000522227 NDUFA12Q9UI09 145 aa6.05□□□□□ -1.44
CTNNA1-234ENST00000522227 CSDC2Q9Y534 153 aaKnown RBP6.05□□□□□ -1.44
CTNNA1-234ENST00000522227 RPL32P62910 135 aaKnown RBP6.04□□□□□ -1.44
CTNNA1-234ENST00000522227 SMAGPQ0VAQ4 97 aa6.04□□□□□ -1.44
CTNNA1-234ENST00000522227 PNRC1Q12796 327 aaPredicted RBP6.04□□□□□ -1.44
CTNNA1-234ENST00000522227 KIR2DL4Q99706 377 aa6.04□□□□□ -1.44
CTNNA1-234ENST00000522227 TP73-AS1Q9UF72 201 aa6.04□□□□□ -1.44
CTNNA1-234ENST00000522227 TGIF2-C20orf24A0A0A6YYL0 155 aa6.03□□□□□ -1.44
CTNNA1-234ENST00000522227 TRBV27A0A0K0K1C4 114 aa6.03□□□□□ -1.44
CTNNA1-234ENST00000522227 IFITM10A6NMD0 228 aa6.03□□□□□ -1.44
CTNNA1-234ENST00000522227 KCNRGQ8N5I3 272 aa6.03□□□□□ -1.44
CTNNA1-234ENST00000522227 SFT2D1Q8WV19 159 aa6.03□□□□□ -1.44
CTNNA1-234ENST00000522227 TOMM7Q9P0U1 55 aa6.03□□□□□ -1.44
CTNNA1-234ENST00000522227 IGKV2-28A0A075B6P5 120 aa6.02□□□□□ -1.45
CTNNA1-234ENST00000522227 SMKR1H3BMG3 65 aa6.02□□□□□ -1.45
CTNNA1-234ENST00000522227 IGKV2D-28P01615 120 aa6.02□□□□□ -1.45
CTNNA1-234ENST00000522227 RPL39P62891 51 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-234ENST00000522227 FAM19A1Q7Z5A9 133 aa6.02□□□□□ -1.45
CTNNA1-234ENST00000522227 NUDT10Q8NFP7 164 aa6.02□□□□□ -1.45
CTNNA1-234ENST00000522227 NUDT11Q96G61 164 aa6.02□□□□□ -1.45
CTNNA1-234ENST00000522227 CNFNQ9BYD5 112 aa6.02□□□□□ -1.45
CTNNA1-234ENST00000522227 SCO1O75880 301 aa6.01□□□□□ -1.45
CTNNA1-234ENST00000522227 GNG4P50150 75 aa6.01□□□□□ -1.45
CTNNA1-234ENST00000522227 PLEKHB2Q96CS7 222 aa6.01□□□□□ -1.45
CTNNA1-234ENST00000522227 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
CTNNA1-234ENST00000522227 VCYO14598 125 aa6□□□□□ -1.45
CTNNA1-234ENST00000522227 TNFRSF6BO95407 300 aa6□□□□□ -1.45
CTNNA1-234ENST00000522227 PRSS2P07478 247 aa6□□□□□ -1.45
CTNNA1-234ENST00000522227 CKS1BP61024 79 aa6□□□□□ -1.45
CTNNA1-234ENST00000522227 Q5BKY6 102 aa6□□□□□ -1.45
CTNNA1-234ENST00000522227 FAM213BQ8TBF2 198 aa6□□□□□ -1.45
CTNNA1-234ENST00000522227 HBBP68871 147 aa5.99□□□□□ -1.45
CTNNA1-234ENST00000522227 FAM104AQ969W3 186 aa5.99□□□□□ -1.45
CTNNA1-234ENST00000522227 TMEM18Q96B42 140 aa5.99□□□□□ -1.45
CTNNA1-234ENST00000522227 FAM210AQ96ND0 272 aa5.99□□□□□ -1.45
CTNNA1-234ENST00000522227 TIMM21Q9BVV7 248 aa5.99□□□□□ -1.45
CTNNA1-234ENST00000522227 FXYD6-FXYD2A0A087WZ82 144 aa5.98□□□□□ -1.45
CTNNA1-234ENST00000522227 SPINK1P00995 79 aa5.98□□□□□ -1.45
CTNNA1-234ENST00000522227 CBLN2Q8IUK8 224 aa5.98□□□□□ -1.45
CTNNA1-234ENST00000522227 NKAPP1Q8N9T2 125 aa5.98□□□□□ -1.45
CTNNA1-234ENST00000522227 HIGD2AQ9BW72 106 aa5.98□□□□□ -1.45
CTNNA1-234ENST00000522227 TRBV20OR9-2A0A075B6H5 130 aa5.97□□□□□ -1.45
CTNNA1-234ENST00000522227 TMEM238C9JI98 176 aa5.97□□□□□ -1.45
CTNNA1-234ENST00000522227 C6orf226Q5I0X4 101 aa5.97□□□□□ -1.45
CTNNA1-234ENST00000522227 Q8N377 158 aa5.97□□□□□ -1.45
CTNNA1-234ENST00000522227 GNG13Q9P2W3 67 aa5.97□□□□□ -1.45
CTNNA1-234ENST00000522227 C9orf92A6NGG3 77 aa5.96□□□□□ -1.46
CTNNA1-234ENST00000522227 CCL20P78556 96 aa5.96□□□□□ -1.46
CTNNA1-234ENST00000522227 AMN1Q8IY45 258 aa5.96□□□□□ -1.46
CTNNA1-234ENST00000522227 MBD3L1Q8WWY6 194 aa5.96□□□□□ -1.46
CTNNA1-234ENST00000522227 C11orf52Q96A22 123 aa5.96□□□□□ -1.46
CTNNA1-234ENST00000522227 CFC1P0CG37 223 aa5.95□□□□□ -1.46
CTNNA1-234ENST00000522227 RAB4AP20338 218 aa5.95□□□□□ -1.46
CTNNA1-234ENST00000522227 FAM19A2Q8N3H0 131 aa5.95□□□□□ -1.46
CTNNA1-234ENST00000522227 BIN3Q9NQY0 253 aa5.95□□□□□ -1.46
CTNNA1-234ENST00000522227 SUMO2P61956 95 aaKnown RBP5.94□□□□□ -1.46
CTNNA1-234ENST00000522227 SPRR4Q96PI1 79 aa5.94□□□□□ -1.46
CTNNA1-234ENST00000522227 ALKBH7Q9BT30 221 aaPredicted RBP5.94□□□□□ -1.46
CTNNA1-234ENST00000522227 TMEM126AQ9H061 195 aa5.94□□□□□ -1.46
CTNNA1-234ENST00000522227 Q6Q795 121 aa5.93□□□□□ -1.46
CTNNA1-234ENST00000522227 SMIM12Q96EX1 92 aa5.93□□□□□ -1.46
CTNNA1-234ENST00000522227 SPANXA1Q9NS26 97 aa5.93□□□□□ -1.46
CTNNA1-234ENST00000522227 MED9Q9NWA0 146 aa5.93□□□□□ -1.46
CTNNA1-234ENST00000522227 K7EN84 100 aa5.92□□□□□ -1.46
CTNNA1-234ENST00000522227 SLC25A20O43772 301 aa5.92□□□□□ -1.46
CTNNA1-234ENST00000522227 H2AFB1P0C5Y9 115 aa5.92□□□□□ -1.46
CTNNA1-234ENST00000522227 MRPS36P82909 103 aaKnown RBP5.92□□□□□ -1.46
CTNNA1-234ENST00000522227 NRACQ8N912 160 aa5.92□□□□□ -1.46
CTNNA1-234ENST00000522227 BORCS7Q96B45 105 aa5.92□□□□□ -1.46
CTNNA1-234ENST00000522227 GIPP09681 153 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-234ENST00000522227 RAB5BP61020 215 aa5.91□□□□□ -1.46
CTNNA1-234ENST00000522227 IFITM3Q01628 133 aa5.91□□□□□ -1.46
CTNNA1-234ENST00000522227 Q6ZN92 141 aa5.91□□□□□ -1.46
CTNNA1-234ENST00000522227 TMEM191AQ9H0A3 160 aa5.91□□□□□ -1.46
CTNNA1-234ENST00000522227 IGLV5-37A0A075B6J1 123 aa5.9□□□□□ -1.46
CTNNA1-234ENST00000522227 M0R378 163 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms