RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 RNASE7Q9H1E1 156 aaKnown RBP4.86□□□□□ -1.63
TRAPPC9-212ENST00000521944 TNFSF18Q9UNG2 199 aa4.86□□□□□ -1.63
TRAPPC9-212ENST00000521944 IGKV2D-26A0A0A0MRZ7 120 aa4.85□□□□□ -1.63
TRAPPC9-212ENST00000521944 TRAV13-1A0A0B4J241 112 aa4.85□□□□□ -1.63
TRAPPC9-212ENST00000521944 CCDC160A6NGH7 325 aa4.85□□□□□ -1.63
TRAPPC9-212ENST00000521944 NDUFA1O15239 70 aa4.85□□□□□ -1.63
TRAPPC9-212ENST00000521944 MBP02144 154 aa4.85□□□□□ -1.63
TRAPPC9-212ENST00000521944 AKR1C3P42330 323 aa4.85□□□□□ -1.63
TRAPPC9-212ENST00000521944 FOXA3P55318 350 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC9-212ENST00000521944 SERF2P84101 59 aa4.85□□□□□ -1.63
TRAPPC9-212ENST00000521944 KIAA0087Q14695 138 aa4.85□□□□□ -1.63
TRAPPC9-212ENST00000521944 BAGE2Q86Y30 109 aa4.85□□□□□ -1.63
TRAPPC9-212ENST00000521944 ORAOV1Q8WV07 137 aa4.85□□□□□ -1.63
TRAPPC9-212ENST00000521944 ALG5Q9Y673 324 aa4.85□□□□□ -1.63
TRAPPC9-212ENST00000521944 NEBP20929 6669 aa4.84□□□□□ -1.63
TRAPPC9-212ENST00000521944 IGHV3OR16-9A0A0B4J2B5 98 aa4.84□□□□□ -1.63
TRAPPC9-212ENST00000521944 F8WDY8 70 aa4.84□□□□□ -1.63
TRAPPC9-212ENST00000521944 LYZL1Q6UWQ5 148 aa4.84□□□□□ -1.63
TRAPPC9-212ENST00000521944 CTXND1A0A1B0GTU2 59 aa4.83□□□□□ -1.64
TRAPPC9-212ENST00000521944 NDUFC2-KCTD14E9PQ53 114 aa4.83□□□□□ -1.64
TRAPPC9-212ENST00000521944 I3L3M4 83 aa4.83□□□□□ -1.64
TRAPPC9-212ENST00000521944 FHITP49789 147 aa4.83□□□□□ -1.64
TRAPPC9-212ENST00000521944 PCOTHQ58A44 107 aa4.83□□□□□ -1.64
TRAPPC9-212ENST00000521944 FAM104AQ969W3 186 aa4.83□□□□□ -1.64
TRAPPC9-212ENST00000521944 TMEM242Q9NWH2 141 aa4.83□□□□□ -1.64
TRAPPC9-212ENST00000521944 IGLV8-61A0A075B6I0 122 aa4.82□□□□□ -1.64
TRAPPC9-212ENST00000521944 TRGC1P0CF51 173 aa4.82□□□□□ -1.64
TRAPPC9-212ENST00000521944 CST9LP1Q5W188 147 aa4.82□□□□□ -1.64
TRAPPC9-212ENST00000521944 SPAG11AQ6PDA7 123 aa4.82□□□□□ -1.64
TRAPPC9-212ENST00000521944 C2orf82Q6UX34 121 aa4.82□□□□□ -1.64
TRAPPC9-212ENST00000521944 MRAP2Q96G30 205 aa4.82□□□□□ -1.64
TRAPPC9-212ENST00000521944 TCEAL7Q9BRU2 100 aa4.82□□□□□ -1.64
TRAPPC9-212ENST00000521944 CYTL1Q9NRR1 136 aa4.82□□□□□ -1.64
TRAPPC9-212ENST00000521944 F2Z2F3 143 aa4.81□□□□□ -1.64
TRAPPC9-212ENST00000521944 PMCHP20382 165 aa4.81□□□□□ -1.64
TRAPPC9-212ENST00000521944 KRTAP6-3Q3LI67 103 aa4.81□□□□□ -1.64
TRAPPC9-212ENST00000521944 C9orf62Q8N4C0 152 aa4.81□□□□□ -1.64
TRAPPC9-212ENST00000521944 URB1-AS1Q96HZ7 61 aa4.81□□□□□ -1.64
TRAPPC9-212ENST00000521944 UBE2D4Q9Y2X8 147 aa4.81□□□□□ -1.64
TRAPPC9-212ENST00000521944 CSDC2Q9Y534 153 aaKnown RBP4.81□□□□□ -1.64
TRAPPC9-212ENST00000521944 TRBV6-5A0A0K0K1A5 114 aa4.8□□□□□ -1.64
TRAPPC9-212ENST00000521944 RPL37AP8A6NKH3 93 aa4.8□□□□□ -1.64
TRAPPC9-212ENST00000521944 PAGE4O60829 102 aa4.8□□□□□ -1.64
TRAPPC9-212ENST00000521944 UPK1BO75841 260 aa4.8□□□□□ -1.64
TRAPPC9-212ENST00000521944 POLR2KP53803 58 aaKnown RBP4.8□□□□□ -1.64
TRAPPC9-212ENST00000521944 LBHQ53QV2 105 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC9-212ENST00000521944 Q6ZUT4 128 aa4.8□□□□□ -1.64
TRAPPC9-212ENST00000521944 MRPL55Q7Z7F7 128 aaKnown RBP4.8□□□□□ -1.64
TRAPPC9-212ENST00000521944 LINC00469Q8N7U9 141 aa4.8□□□□□ -1.64
TRAPPC9-212ENST00000521944 STOML3Q8TAV4 291 aa4.8□□□□□ -1.64
TRAPPC9-212ENST00000521944 CNFNQ9BYD5 112 aa4.8□□□□□ -1.64
TRAPPC9-212ENST00000521944 TRBV30A0A0K0K1B3 111 aa4.79□□□□□ -1.64
TRAPPC9-212ENST00000521944 C7orf77A4D0Y5 90 aa4.79□□□□□ -1.64
TRAPPC9-212ENST00000521944 S100A9P06702 114 aaKnown RBP4.79□□□□□ -1.64
TRAPPC9-212ENST00000521944 PRSS2P07478 247 aa4.79□□□□□ -1.64
TRAPPC9-212ENST00000521944 TMUB2Q71RG4 321 aa4.79□□□□□ -1.64
TRAPPC9-212ENST00000521944 PACRGQ96M98 296 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC9-212ENST00000521944 LINC00167Q96N53 147 aa4.79□□□□□ -1.64
TRAPPC9-212ENST00000521944 XAGE1AQ9HD64 81 aa4.79□□□□□ -1.64
TRAPPC9-212ENST00000521944 TP73-AS1Q9UF72 201 aa4.79□□□□□ -1.64
TRAPPC9-212ENST00000521944 A0A1B0GVG6 124 aa4.78□□□□□ -1.64
TRAPPC9-212ENST00000521944 FAM240BA0A1B0GVZ2 78 aa4.78□□□□□ -1.64
TRAPPC9-212ENST00000521944 PET100P0DJ07 73 aa4.78□□□□□ -1.64
TRAPPC9-212ENST00000521944 DAND5Q8N907 189 aa4.78□□□□□ -1.64
TRAPPC9-212ENST00000521944 MARVELD1Q9BSK0 173 aa4.78□□□□□ -1.64
TRAPPC9-212ENST00000521944 TRBV27A0A0K0K1C4 114 aa4.77□□□□□ -1.65
TRAPPC9-212ENST00000521944 MAP1LC3B2A6NCE7 125 aa4.77□□□□□ -1.65
TRAPPC9-212ENST00000521944 ZNF727A8MUV8 499 aa4.77□□□□□ -1.65
TRAPPC9-212ENST00000521944 NOL3O60936 208 aaKnown RBP4.77□□□□□ -1.65
TRAPPC9-212ENST00000521944 RPL35P42766 123 aaKnown RBP4.77□□□□□ -1.65
TRAPPC9-212ENST00000521944 RPS20P60866 119 aaKnown RBP4.77□□□□□ -1.65
TRAPPC9-212ENST00000521944 RPL7L1Q6DKI1 246 aaKnown RBP4.77□□□□□ -1.65
TRAPPC9-212ENST00000521944 PLEKHB2Q96CS7 222 aa4.77□□□□□ -1.65
TRAPPC9-212ENST00000521944 MAP1LC3BQ9GZQ8 125 aa4.77□□□□□ -1.65
TRAPPC9-212ENST00000521944 IFNA1P01562 189 aa4.76□□□□□ -1.65
TRAPPC9-212ENST00000521944 GAGE10A6NGK3 116 aa4.75□□□□□ -1.65
TRAPPC9-212ENST00000521944 UBE2AP49459 152 aa4.75□□□□□ -1.65
TRAPPC9-212ENST00000521944 PRLHP81277 87 aa4.75□□□□□ -1.65
TRAPPC9-212ENST00000521944 Q8N377 158 aa4.75□□□□□ -1.65
TRAPPC9-212ENST00000521944 Q8NBF4 154 aa4.75□□□□□ -1.65
TRAPPC9-212ENST00000521944 TMEM18Q96B42 140 aa4.75□□□□□ -1.65
TRAPPC9-212ENST00000521944 KIR2DL4Q99706 377 aa4.75□□□□□ -1.65
TRAPPC9-212ENST00000521944 CCDC32Q9BV29 185 aa4.75□□□□□ -1.65
TRAPPC9-212ENST00000521944 ST20Q9HBF5 79 aa4.75□□□□□ -1.65
TRAPPC9-212ENST00000521944 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
TRAPPC9-212ENST00000521944 CFC1P0CG37 223 aa4.74□□□□□ -1.65
TRAPPC9-212ENST00000521944 TEX261Q6UWH6 196 aa4.74□□□□□ -1.65
TRAPPC9-212ENST00000521944 FAM210AQ96ND0 272 aa4.74□□□□□ -1.65
TRAPPC9-212ENST00000521944 RPL32P62910 135 aaKnown RBP4.73□□□□□ -1.65
TRAPPC9-212ENST00000521944 PNRC1Q12796 327 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC9-212ENST00000521944 Q5BKY6 102 aa4.73□□□□□ -1.65
TRAPPC9-212ENST00000521944 CENPWQ5EE01 88 aa4.73□□□□□ -1.65
TRAPPC9-212ENST00000521944 TIMM21Q9BVV7 248 aa4.73□□□□□ -1.65
TRAPPC9-212ENST00000521944 RAB19A4D1S5 217 aa4.72□□□□□ -1.65
TRAPPC9-212ENST00000521944 SPINK1P00995 79 aa4.72□□□□□ -1.65
TRAPPC9-212ENST00000521944 COX6B2Q6YFQ2 88 aa4.72□□□□□ -1.65
TRAPPC9-212ENST00000521944 TRBV20OR9-2A0A075B6H5 130 aa4.71□□□□□ -1.66
TRAPPC9-212ENST00000521944 XKRY2A2RUG3 117 aa4.71□□□□□ -1.66
TRAPPC9-212ENST00000521944 SCO1O75880 301 aa4.71□□□□□ -1.66
TRAPPC9-212ENST00000521944 RPL39P62891 51 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms