RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 SDHAF1A6NFY7 115 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 D6R8Y8 96 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 I3L3M4 83 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 K7EP13 123 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 SIVA1O15304 175 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 NCR2O95944 276 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 NPYP01303 97 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 MT-ND6P03923 174 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 COTL1Q14019 142 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 IQCJQ1A5X6 159 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 MAJINQ3KP22 176 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 NTM-AS1Q6ZSK4 140 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 CBLN2Q8IUK8 224 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 ORMDL3Q8N138 153 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 PRELID3AQ96N28 172 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 TMEM243Q9BU79 118 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 TMEM70Q9BUB7 260 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 LAMTOR2Q9Y2Q5 125 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 TRAPPC1Q9Y5R8 145 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 IGLV2-18A0A075B6J9 118 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 TRBV25-1A0A075B6N4 114 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 NBDYA0A0U1RRE5 68 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 LOC389332A0A1B0GUA5 103 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 COLCA2A8K830 154 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 TMEM262E9PQX1 116 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 TCAPO15273 167 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 SCO1O75880 301 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 ATP5LO75964 103 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 ESDP10768 282 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 FCER1GP30273 86 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 PKIAP61925 76 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 FABP9Q0Z7S8 132 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 TTC32Q5I0X7 151 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 LINC01556Q5JQF7 62 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 NIT1Q86X76 327 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 WFDC10BQ8IUB3 73 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 Q8N8P6 123 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 DEFB104AQ8WTQ1 72 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 CHCHD7Q9BUK0 85 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 SMIM2Q9BVW6 85 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 MAP1LC3AQ9H492 121 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 MUC4Q99102 2169 aa2.05□□□□□ -2.08
VPS13B-209ENST00000521559 A0A087WX48 190 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 LINC01546A6NGU7 62 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 IBA57-AS1B1ANH7 110 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 K7EMI3 77 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 M0R2N4 97 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 UBE2L6O14933 153 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 IGHV3-30P01768 117 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 IGHV3-33P01772 117 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 IGHV3-30-3P0DP02 117 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 IGHV3-30-5P0DP03 117 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 RAB5AP20339 215 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 G0S2P27469 103 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 KRTAP10-1P60331 282 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 RBX1P62877 108 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 C10orf126Q8N4M7 172 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 C20orf203Q8NBC4 194 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 TIMM21Q9BVV7 248 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 NXT2Q9NPJ8 142 aaKnown RBP2.04□□□□□ -2.08
VPS13B-209ENST00000521559 TENM3Q9P273 2699 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 NBEAL2Q6ZNJ1 2754 aa2.04□□□□□ -2.08
VPS13B-209ENST00000521559 STAB2Q8WWQ8 2551 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 IGLV4-60A0A075B6I1 120 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.03□□□□□ -2.08
VPS13B-209ENST00000521559 TRAV8-3A0A0A6YYJ7 113 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 IGKV2-29A2NJV5 120 aaPredicted RBP2.03□□□□□ -2.08
VPS13B-209ENST00000521559 TRGC2P03986 189 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 LINC00614P0C842 121 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 FGF6P10767 208 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 ZNF25P17030 456 aaPredicted RBP2.03□□□□□ -2.08
VPS13B-209ENST00000521559 IFI27P40305 119 aaPredicted RBP2.03□□□□□ -2.08
VPS13B-209ENST00000521559 RAB5BP61020 215 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 SMAGPQ0VAQ4 97 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 Q0VG73 95 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 ORMDL2Q53FV1 153 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 MPV17L2Q567V2 206 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 C1orf134Q5TEV5 83 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 AMMECR1LQ6DCA0 310 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 RNASEKQ6P5S7 137 aaKnown RBP2.03□□□□□ -2.08
VPS13B-209ENST00000521559 FA2HQ7L5A8 372 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 MRPL52Q86TS9 123 aaKnown RBP2.03□□□□□ -2.08
VPS13B-209ENST00000521559 C6orf223Q8N319 242 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 Q8N976 141 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 OR5A1Q8NGJ0 315 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 C18orf32Q8TCD1 76 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 UBE2WQ96B02 151 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 TMEM101Q96IK0 257 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 HIST1H4GQ99525 98 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 SPANXA1Q9NS26 97 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 KLK12Q9UKR0 248 aa2.03□□□□□ -2.08
VPS13B-209ENST00000521559 CSDC2Q9Y534 153 aaKnown RBP2.03□□□□□ -2.08
VPS13B-209ENST00000521559 A0A0J9YXY3 114 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 LINC01549A6NIU2 74 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 IGIPA6NJ69 53 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 H0Y8G0 127 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 ANGP03950 147 aaKnown RBP2.02□□□□□ -2.09
VPS13B-209ENST00000521559 SEC61GP60059 68 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms