RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 CMC4P56277 68 aaPredicted RBP4.95□□□□□ -1.62
CTNNA1-227ENST00000521387 RHOHQ15669 191 aa4.95□□□□□ -1.62
CTNNA1-227ENST00000521387 PIK3CD-AS1Q5SR53 167 aa4.95□□□□□ -1.62
CTNNA1-227ENST00000521387 CFAP126Q5VTH2 177 aa4.95□□□□□ -1.62
CTNNA1-227ENST00000521387 TMEM141Q96I45 108 aa4.95□□□□□ -1.62
CTNNA1-227ENST00000521387 KIR2DL4Q99706 377 aa4.95□□□□□ -1.62
CTNNA1-227ENST00000521387 Q9H8V8 135 aa4.95□□□□□ -1.62
CTNNA1-227ENST00000521387 COX11Q9Y6N1 276 aa4.95□□□□□ -1.62
CTNNA1-227ENST00000521387 IGLV4-69A0A075B6H9 119 aa4.94□□□□□ -1.62
CTNNA1-227ENST00000521387 IGHV3OR16-12A0A075B7B8 117 aa4.94□□□□□ -1.62
CTNNA1-227ENST00000521387 LINC01549A6NIU2 74 aa4.94□□□□□ -1.62
CTNNA1-227ENST00000521387 C11orf86A6NJI1 115 aa4.94□□□□□ -1.62
CTNNA1-227ENST00000521387 I3L3M4 83 aa4.94□□□□□ -1.62
CTNNA1-227ENST00000521387 EIF4EBP3O60516 100 aaPredicted RBP4.94□□□□□ -1.62
CTNNA1-227ENST00000521387 PLNP26678 52 aa4.94□□□□□ -1.62
CTNNA1-227ENST00000521387 HSD52Q0P140 79 aa4.94□□□□□ -1.62
CTNNA1-227ENST00000521387 GAGE1Q13065 139 aa4.94□□□□□ -1.62
CTNNA1-227ENST00000521387 ORAOV1Q8WV07 137 aa4.94□□□□□ -1.62
CTNNA1-227ENST00000521387 TIMM17AQ99595 171 aa4.94□□□□□ -1.62
CTNNA1-227ENST00000521387 OPRPNQ99935 248 aaPredicted RBP4.94□□□□□ -1.62
CTNNA1-227ENST00000521387 CST9LQ9H4G1 147 aa4.94□□□□□ -1.62
CTNNA1-227ENST00000521387 HIGD1BQ9P298 99 aa4.94□□□□□ -1.62
CTNNA1-227ENST00000521387 TRBV25-1A0A075B6N4 114 aa4.93□□□□□ -1.62
CTNNA1-227ENST00000521387 A0A087WTM6 91 aa4.93□□□□□ -1.62
CTNNA1-227ENST00000521387 NPSP0C0P6 89 aa4.93□□□□□ -1.62
CTNNA1-227ENST00000521387 PMVKQ15126 192 aa4.93□□□□□ -1.62
CTNNA1-227ENST00000521387 C20orf203Q8NBC4 194 aa4.93□□□□□ -1.62
CTNNA1-227ENST00000521387 TNFRSF18Q9Y5U5 241 aa4.93□□□□□ -1.62
CTNNA1-227ENST00000521387 TRAV8-6A0A0B4J262 113 aa4.92□□□□□ -1.62
CTNNA1-227ENST00000521387 RHODO00212 210 aa4.92□□□□□ -1.62
CTNNA1-227ENST00000521387 IGHV3-53P01767 116 aa4.92□□□□□ -1.62
CTNNA1-227ENST00000521387 HTN3P15516 51 aa4.92□□□□□ -1.62
CTNNA1-227ENST00000521387 EMP1P54849 157 aa4.92□□□□□ -1.62
CTNNA1-227ENST00000521387 SEC11AP67812 179 aa4.92□□□□□ -1.62
CTNNA1-227ENST00000521387 RNASE8Q8TDE3 154 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-227ENST00000521387 FAM104AQ969W3 186 aa4.92□□□□□ -1.62
CTNNA1-227ENST00000521387 CHAC1Q9BUX1 264 aa4.92□□□□□ -1.62
CTNNA1-227ENST00000521387 IGLV4-3A0A075B6K6 122 aa4.91□□□□□ -1.62
CTNNA1-227ENST00000521387 TRGV1A0A0A0MS02 117 aa4.91□□□□□ -1.62
CTNNA1-227ENST00000521387 PLAC8L1A1L4L8 177 aa4.91□□□□□ -1.62
CTNNA1-227ENST00000521387 E9PLD3 99 aa4.91□□□□□ -1.62
CTNNA1-227ENST00000521387 H3BRM9 83 aa4.91□□□□□ -1.62
CTNNA1-227ENST00000521387 K7EP13 123 aa4.91□□□□□ -1.62
CTNNA1-227ENST00000521387 Q6ZTI0 123 aa4.91□□□□□ -1.62
CTNNA1-227ENST00000521387 OR4C5Q8NGB2 326 aa4.91□□□□□ -1.62
CTNNA1-227ENST00000521387 DNAJC30Q96LL9 226 aa4.91□□□□□ -1.62
CTNNA1-227ENST00000521387 PRADC1Q9BSG0 188 aa4.91□□□□□ -1.62
CTNNA1-227ENST00000521387 CHCHD7Q9BUK0 85 aa4.91□□□□□ -1.62
CTNNA1-227ENST00000521387 IGHV3-38A0A0C4DH36 116 aa4.9□□□□□ -1.63
CTNNA1-227ENST00000521387 MYMXA0A1B0GTQ4 84 aa4.9□□□□□ -1.63
CTNNA1-227ENST00000521387 CCL25O15444 150 aa4.9□□□□□ -1.63
CTNNA1-227ENST00000521387 SPART-AS1P0CW21 52 aa4.9□□□□□ -1.63
CTNNA1-227ENST00000521387 FXYD2P54710 66 aa4.9□□□□□ -1.63
CTNNA1-227ENST00000521387 TTC32Q5I0X7 151 aa4.9□□□□□ -1.63
CTNNA1-227ENST00000521387 PAPPA-AS1Q5QFB9 102 aa4.9□□□□□ -1.63
CTNNA1-227ENST00000521387 NFE4Q86UQ8 179 aa4.9□□□□□ -1.63
CTNNA1-227ENST00000521387 TMEM263Q8WUH6 116 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-227ENST00000521387 ZNF479Q96JC4 524 aa4.9□□□□□ -1.63
CTNNA1-227ENST00000521387 TRBV7-3A0A075B6L6 115 aa4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 TRAV4A0A0B4J268 109 aa4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 A0A0J9YXV3 536 aa4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 A6NDN8 102 aa4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 C9orf118A6NHY6 69 aa4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 PTTG1IPP53801 180 aa4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 TSPEAR-AS2P59090 65 aa4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 UBE2V1Q13404 147 aa4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 VAMP3Q15836 100 aa4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 TAL2Q16559 108 aa4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 CEND1Q8N111 149 aa4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 PLEKHB2Q96CS7 222 aa4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 AMELXQ99217 191 aa4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 NOP10Q9NPE3 64 aaKnown RBP4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 PYGO1Q9Y3Y4 419 aa4.89□□□□□ -1.63
CTNNA1-227ENST00000521387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 TMEM223A0PJW6 202 aa4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 IGKV2-29A2NJV5 120 aaPredicted RBP4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 ZNF815PA8K554 130 aa4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 SMIM13P0DJ93 91 aa4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 ZNF22P17026 224 aaPredicted RBP4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 CCL18P55774 89 aa4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 HERVK_113P61574 105 aa4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 DAZ2Q13117 558 aaKnown RBP4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 TMEM170BQ5T4T1 132 aa4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 FAM222AQ5U5X8 452 aa4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 AMMECR1LQ6DCA0 310 aa4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 Q6ZSA8 131 aa4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 RAB37Q96AX2 223 aa4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 C16orf74Q96GX8 76 aa4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 NAA38Q9BRA0 125 aaKnown RBP4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 TM2D2Q9BX73 214 aa4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 VCX2Q9H322 139 aa4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 UBE2D4Q9Y2X8 147 aa4.88□□□□□ -1.63
CTNNA1-227ENST00000521387 GAGE12BA1L429 117 aa4.87□□□□□ -1.63
CTNNA1-227ENST00000521387 H3BUT2 72 aa4.87□□□□□ -1.63
CTNNA1-227ENST00000521387 K7EQD1 137 aa4.87□□□□□ -1.63
CTNNA1-227ENST00000521387 LEPROTO15243 131 aa4.87□□□□□ -1.63
CTNNA1-227ENST00000521387 GAGE7O76087 117 aa4.87□□□□□ -1.63
CTNNA1-227ENST00000521387 GAGE12FP0CL80 117 aa4.87□□□□□ -1.63
CTNNA1-227ENST00000521387 GAGE12GP0CL81 117 aa4.87□□□□□ -1.63
CTNNA1-227ENST00000521387 GAGE12IP0CL82 117 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms