RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 IGKV1D-37A0A075B6S9 117 aa2.09□□□□□ -2.07
SKP1-208ENST00000521216 IGHV1-45A0A0A0MS14 117 aa2.09□□□□□ -2.07
SKP1-208ENST00000521216 hDV103S1A0JD37 113 aa2.09□□□□□ -2.07
SKP1-208ENST00000521216 E7EUB6 86 aa2.09□□□□□ -2.07
SKP1-208ENST00000521216 DNAL4O96015 105 aa2.09□□□□□ -2.07
SKP1-208ENST00000521216 SPANXN5Q5MJ07 72 aa2.09□□□□□ -2.07
SKP1-208ENST00000521216 MIR17HGQ75NE6 70 aa2.09□□□□□ -2.07
SKP1-208ENST00000521216 C20orf166-AS1Q96NR2 134 aa2.09□□□□□ -2.07
SKP1-208ENST00000521216 CDC42SE1Q9NRR8 79 aa2.09□□□□□ -2.07
SKP1-208ENST00000521216 C11orf86A6NJI1 115 aa2.08□□□□□ -2.08
SKP1-208ENST00000521216 M0R135 149 aa2.08□□□□□ -2.08
SKP1-208ENST00000521216 IGKV1-16P04430 117 aa2.08□□□□□ -2.08
SKP1-208ENST00000521216 PFN4Q8NHR9 129 aa2.08□□□□□ -2.08
SKP1-208ENST00000521216 OBSCN-AS1Q96MR7 158 aa2.08□□□□□ -2.08
SKP1-208ENST00000521216 TTTY13Q9BZ97 58 aa2.08□□□□□ -2.08
SKP1-208ENST00000521216 TTTY10Q9BZA0 68 aa2.08□□□□□ -2.08
SKP1-208ENST00000521216 BPESC1Q9GZL8 116 aa2.08□□□□□ -2.08
SKP1-208ENST00000521216 NDUFA12Q9UI09 145 aa2.08□□□□□ -2.08
SKP1-208ENST00000521216 EML5Q05BV3 1969 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 TRAV22A0A0B4J277 110 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 TRBV7-4A0A0J9YYF1 115 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 HCG22E2RYF7 251 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 IAPPP10997 89 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 EDDM3BP56851 147 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 FXYD4P59646 89 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 TFF3Q07654 80 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 FAM229BQ4G0N7 80 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 C9orf116Q5BN46 136 aaPredicted RBP2.07□□□□□ -2.08
SKP1-208ENST00000521216 SOSTDC1Q6X4U4 206 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 Q8IYB0 196 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 DEFB106AQ8N104 65 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 SCGB3A1Q96QR1 104 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 LINC00467Q9BRT7 94 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 BPTFQ12830 3046 aa2.07□□□□□ -2.08
SKP1-208ENST00000521216 IGLV3-9A0A075B6K5 115 aa2.06□□□□□ -2.08
SKP1-208ENST00000521216 TRBV6-8A0A0A6YYG3 113 aa2.06□□□□□ -2.08
SKP1-208ENST00000521216 D6R8Y8 96 aa2.06□□□□□ -2.08
SKP1-208ENST00000521216 LEPROTO15243 131 aa2.06□□□□□ -2.08
SKP1-208ENST00000521216 FXYD7P58549 80 aa2.06□□□□□ -2.08
SKP1-208ENST00000521216 SFTA2Q6UW10 78 aa2.06□□□□□ -2.08
SKP1-208ENST00000521216 TMEM14BQ9NUH8 114 aa2.06□□□□□ -2.08
SKP1-208ENST00000521216 TIMM8BQ9Y5J9 83 aaPredicted RBP2.06□□□□□ -2.08
SKP1-208ENST00000521216 TANC2Q9HCD6 1990 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 POLEQ07864 2286 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 A0A087WVE0 104 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 IGKV3D-7A0A0C4DH55 119 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 LOC101927531A0A1B0GV80 90 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 IGIPA6NJ69 53 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 C5orf67F2Z3F1 127 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 JMJD7-PLA2G4BH0Y9G9 81 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 ARMS2P0C7Q2 107 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 BAALC-AS2P0C853 105 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 RPL28P46779 137 aaKnown RBP2.05□□□□□ -2.08
SKP1-208ENST00000521216 ELOF1P60002 83 aaKnown RBP2.05□□□□□ -2.08
SKP1-208ENST00000521216 PDE6HQ13956 83 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 Q5VV11 94 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 ZNF833PQ6ZTB9 187 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 TMEM254Q8TBM7 123 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 UBL5Q9BZL1 73 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 LINC00846Q9NV44 126 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 TMEM14CQ9P0S9 112 aa2.05□□□□□ -2.08
SKP1-208ENST00000521216 TRAV23DV6A0A075B6W5 121 aa2.04□□□□□ -2.08
SKP1-208ENST00000521216 I3L3M4 83 aa2.04□□□□□ -2.08
SKP1-208ENST00000521216 J3QKU1 62 aa2.04□□□□□ -2.08
SKP1-208ENST00000521216 NDUFB1O75438 58 aa2.04□□□□□ -2.08
SKP1-208ENST00000521216 NDUFA3O95167 84 aa2.04□□□□□ -2.08
SKP1-208ENST00000521216 COL4A2P08572 1712 aa2.04□□□□□ -2.08
SKP1-208ENST00000521216 SAA2P0DJI9 122 aaPredicted RBP2.04□□□□□ -2.08
SKP1-208ENST00000521216 SPINT3P49223 89 aa2.04□□□□□ -2.08
SKP1-208ENST00000521216 ZNF137PP52743 207 aa2.04□□□□□ -2.08
SKP1-208ENST00000521216 MUSTN1Q8IVN3 82 aa2.04□□□□□ -2.08
SKP1-208ENST00000521216 CNFNQ9BYD5 112 aa2.04□□□□□ -2.08
SKP1-208ENST00000521216 CDC42SE2Q9NRR3 84 aa2.04□□□□□ -2.08
SKP1-208ENST00000521216 IGKV1-12A0A0C4DH73 117 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 CHKB-CPT1BH3BT56 60 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 M0R3E3 92 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 CCL22O00626 93 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 IGKV1D-12P01611 117 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 IGLV3-1P01715 115 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 BSPH1Q075Z2 132 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 FAM74A4Q5TZK3 123 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 CASC2Q6XLA1 102 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 Q8NDZ9 215 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 SPTSSBQ8NFR3 76 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 RETNLBQ9BQ08 111 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 CACNA1GO43497 2377 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 MYO9BQ13459 2157 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 SNRNP200O75643 2136 aaKnown RBP2.03□□□□□ -2.08
SKP1-208ENST00000521216 MDC1Q14676 2089 aaKnown RBP2.03□□□□□ -2.08
SKP1-208ENST00000521216 ATG2BQ96BY7 2078 aa2.03□□□□□ -2.08
SKP1-208ENST00000521216 H0YGX0 51 aa2.02□□□□□ -2.09
SKP1-208ENST00000521216 CD24P25063 80 aa2.02□□□□□ -2.09
SKP1-208ENST00000521216 NREPQ16612 68 aa2.02□□□□□ -2.09
SKP1-208ENST00000521216 MIAQ16674 131 aa2.02□□□□□ -2.09
SKP1-208ENST00000521216 Q86TA4 180 aa2.02□□□□□ -2.09
SKP1-208ENST00000521216 AMELXQ99217 191 aa2.02□□□□□ -2.09
SKP1-208ENST00000521216 Q9BRP9 147 aa2.02□□□□□ -2.09
SKP1-208ENST00000521216 SNURFQ9Y675 71 aa2.02□□□□□ -2.09
SKP1-208ENST00000521216 MUC22E2RYF6 1773 aaPredicted RBP2.01□□□□□ -2.09
SKP1-208ENST00000521216 LCE6AA0A183 80 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms