RNA–Protein interactions for RNA: ENST00000520866.5

NSMCE2-208, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, human

TSL 2 BASIC

Gene NSMCE2, Length 1,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE2-208	ENST00000520866	NUP35	Q8NFH5	326 aa		4.91	□□□□□ -1.62
NSMCE2-208	ENST00000520866	CSDC2	Q9Y534	153 aa	Known RBP	4.91	□□□□□ -1.62
NSMCE2-208	ENST00000520866		A0A087WZ39	114 aa		4.9	□□□□□ -1.63
NSMCE2-208	ENST00000520866	TRBV6-5	A0A0K0K1A5	114 aa		4.9	□□□□□ -1.63
NSMCE2-208	ENST00000520866	C7orf77	A4D0Y5	90 aa		4.9	□□□□□ -1.63
NSMCE2-208	ENST00000520866	ARPC5	O15511	151 aa		4.9	□□□□□ -1.63
NSMCE2-208	ENST00000520866	TAGLN2	P37802	199 aa	Known RBP	4.9	□□□□□ -1.63
NSMCE2-208	ENST00000520866	OR10D4P	Q8NGN7	298 aa		4.9	□□□□□ -1.63
NSMCE2-208	ENST00000520866	CDC42SE2	Q9NRR3	84 aa		4.9	□□□□□ -1.63
NSMCE2-208	ENST00000520866		A0A1W2PNN7	141 aa		4.89	□□□□□ -1.63
NSMCE2-208	ENST00000520866		G3V3Q6	166 aa		4.89	□□□□□ -1.63
NSMCE2-208	ENST00000520866	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.89	□□□□□ -1.63
NSMCE2-208	ENST00000520866	PPP1R17	O96001	155 aa		4.89	□□□□□ -1.63
NSMCE2-208	ENST00000520866	KRTAP10-5	P60370	271 aa		4.89	□□□□□ -1.63
NSMCE2-208	ENST00000520866	MEF2B	Q02080	365 aa	Predicted RBP	4.89	□□□□□ -1.63
NSMCE2-208	ENST00000520866	TMEM241	Q24JQ0	296 aa		4.89	□□□□□ -1.63
NSMCE2-208	ENST00000520866		Q5BKY6	102 aa		4.89	□□□□□ -1.63
NSMCE2-208	ENST00000520866	BORCS7	Q96B45	105 aa		4.89	□□□□□ -1.63
NSMCE2-208	ENST00000520866	LINC00526	Q96FQ7	95 aa		4.89	□□□□□ -1.63
NSMCE2-208	ENST00000520866	ST20	Q9HBF5	79 aa		4.89	□□□□□ -1.63
NSMCE2-208	ENST00000520866	CYTL1	Q9NRR1	136 aa		4.89	□□□□□ -1.63
NSMCE2-208	ENST00000520866	MRPL35	Q9NZE8	188 aa	Known RBP	4.89	□□□□□ -1.63
NSMCE2-208	ENST00000520866	BCL2L11	O43521	198 aa		4.88	□□□□□ -1.63
NSMCE2-208	ENST00000520866	BCL2	P10415	239 aa		4.88	□□□□□ -1.63
NSMCE2-208	ENST00000520866	RPP21	Q9H633	154 aa	Known RBP	4.88	□□□□□ -1.63
NSMCE2-208	ENST00000520866	TRBV27	A0A0K0K1C4	114 aa		4.87	□□□□□ -1.63
NSMCE2-208	ENST00000520866		A0A1B0GV50	99 aa		4.87	□□□□□ -1.63
NSMCE2-208	ENST00000520866	KANTR	A0A1W2PQU2	76 aa		4.87	□□□□□ -1.63
NSMCE2-208	ENST00000520866	NDUFA1	O15239	70 aa		4.87	□□□□□ -1.63
NSMCE2-208	ENST00000520866	TCAP	O15273	167 aa		4.87	□□□□□ -1.63
NSMCE2-208	ENST00000520866	TLX1NB	P0CAT3	122 aa		4.87	□□□□□ -1.63
NSMCE2-208	ENST00000520866	SPAG11B	Q08648	103 aa		4.87	□□□□□ -1.63
NSMCE2-208	ENST00000520866	PHF5A	Q7RTV0	110 aa	Known RBP	4.87	□□□□□ -1.63
NSMCE2-208	ENST00000520866	RPL39L	Q96EH5	51 aa	Known RBP	4.87	□□□□□ -1.63
NSMCE2-208	ENST00000520866	GNG13	Q9P2W3	67 aa		4.87	□□□□□ -1.63
NSMCE2-208	ENST00000520866	RAB19	A4D1S5	217 aa		4.86	□□□□□ -1.63
NSMCE2-208	ENST00000520866		A8MWL6	223 aa		4.86	□□□□□ -1.63
NSMCE2-208	ENST00000520866	FCER1G	P30273	86 aa		4.86	□□□□□ -1.63
NSMCE2-208	ENST00000520866	UBE2B	P63146	152 aa		4.86	□□□□□ -1.63
NSMCE2-208	ENST00000520866	KIR2DL4	Q99706	377 aa		4.86	□□□□□ -1.63
NSMCE2-208	ENST00000520866	MED9	Q9NWA0	146 aa		4.86	□□□□□ -1.63
NSMCE2-208	ENST00000520866	HMSD	A8MTL9	139 aa		4.85	□□□□□ -1.63
NSMCE2-208	ENST00000520866	VCY	O14598	125 aa		4.85	□□□□□ -1.63
NSMCE2-208	ENST00000520866	TSHB	P01222	138 aa		4.85	□□□□□ -1.63
NSMCE2-208	ENST00000520866	KRTAP1-4	P0C5Y4	121 aa		4.85	□□□□□ -1.63
NSMCE2-208	ENST00000520866	SEC61B	P60468	96 aa	Known RBP	4.85	□□□□□ -1.63
NSMCE2-208	ENST00000520866	CTAG1A	P78358	180 aa		4.85	□□□□□ -1.63
NSMCE2-208	ENST00000520866	TIMM21	Q9BVV7	248 aa		4.85	□□□□□ -1.63
NSMCE2-208	ENST00000520866	TMEM242	Q9NWH2	141 aa		4.85	□□□□□ -1.63
NSMCE2-208	ENST00000520866	TRAV13-1	A0A0B4J241	112 aa		4.84	□□□□□ -1.63
NSMCE2-208	ENST00000520866	PPP1R2P9	O14990	202 aa		4.84	□□□□□ -1.63
NSMCE2-208	ENST00000520866	NUPR1	O60356	82 aa		4.84	□□□□□ -1.63
NSMCE2-208	ENST00000520866	POLR2K	P53803	58 aa	Known RBP	4.84	□□□□□ -1.63
NSMCE2-208	ENST00000520866	PAPPA-AS1	Q5QFB9	102 aa		4.84	□□□□□ -1.63
NSMCE2-208	ENST00000520866	TMEM191A	Q9H0A3	160 aa		4.84	□□□□□ -1.63
NSMCE2-208	ENST00000520866	TRBV20OR9-2	A0A075B6H5	130 aa		4.83	□□□□□ -1.64
NSMCE2-208	ENST00000520866		M0QXV9	152 aa		4.83	□□□□□ -1.64
NSMCE2-208	ENST00000520866	ZNF861P	O60384	105 aa		4.83	□□□□□ -1.64
NSMCE2-208	ENST00000520866	CFC1B	P0CG36	223 aa		4.83	□□□□□ -1.64
NSMCE2-208	ENST00000520866	CFC1	P0CG37	223 aa		4.83	□□□□□ -1.64
NSMCE2-208	ENST00000520866	FOXA3	P55318	350 aa	Predicted RBP	4.83	□□□□□ -1.64
NSMCE2-208	ENST00000520866	C5orf38	Q86SI9	138 aa		4.83	□□□□□ -1.64
NSMCE2-208	ENST00000520866	ORAOV1	Q8WV07	137 aa		4.83	□□□□□ -1.64
NSMCE2-208	ENST00000520866	SMDT1	Q9H4I9	107 aa		4.83	□□□□□ -1.64
NSMCE2-208	ENST00000520866	UBE2D4	Q9Y2X8	147 aa		4.83	□□□□□ -1.64
NSMCE2-208	ENST00000520866	TRBV30	A0A0K0K1B3	111 aa		4.82	□□□□□ -1.64
NSMCE2-208	ENST00000520866		A0A1B0GUT8	65 aa		4.82	□□□□□ -1.64
NSMCE2-208	ENST00000520866	GATC	O43716	136 aa	Known RBP	4.82	□□□□□ -1.64
NSMCE2-208	ENST00000520866	FAM231D	Q6ZW35	169 aa		4.82	□□□□□ -1.64
NSMCE2-208	ENST00000520866	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.82	□□□□□ -1.64
NSMCE2-208	ENST00000520866	OPRPN	Q99935	248 aa	Predicted RBP	4.82	□□□□□ -1.64
NSMCE2-208	ENST00000520866	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.81	□□□□□ -1.64
NSMCE2-208	ENST00000520866	NDUFC2-KCTD14	E9PQ53	114 aa		4.81	□□□□□ -1.64
NSMCE2-208	ENST00000520866	CRYGA	P11844	174 aa		4.81	□□□□□ -1.64
NSMCE2-208	ENST00000520866	RPL28	P46779	137 aa	Known RBP	4.81	□□□□□ -1.64
NSMCE2-208	ENST00000520866	LBH	Q53QV2	105 aa	Predicted RBP	4.81	□□□□□ -1.64
NSMCE2-208	ENST00000520866	PACRG	Q96M98	296 aa	Predicted RBP	4.81	□□□□□ -1.64
NSMCE2-208	ENST00000520866	RNASE7	Q9H1E1	156 aa	Known RBP	4.81	□□□□□ -1.64
NSMCE2-208	ENST00000520866	SPANXA1	Q9NS26	97 aa		4.81	□□□□□ -1.64
NSMCE2-208	ENST00000520866	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.8	□□□□□ -1.64
NSMCE2-208	ENST00000520866	TMEM250	H0YL14	139 aa		4.8	□□□□□ -1.64
NSMCE2-208	ENST00000520866	TPRXL	Q17RH7	258 aa		4.8	□□□□□ -1.64
NSMCE2-208	ENST00000520866	GAGE2E	Q4V326	116 aa		4.8	□□□□□ -1.64
NSMCE2-208	ENST00000520866	TYMSOS	Q8TAI1	123 aa		4.8	□□□□□ -1.64
NSMCE2-208	ENST00000520866	GAGE2D	Q9UEU5	116 aa		4.8	□□□□□ -1.64
NSMCE2-208	ENST00000520866	LINC00862	A6NCI5	91 aa		4.79	□□□□□ -1.64
NSMCE2-208	ENST00000520866	RAB4A	P20338	218 aa		4.79	□□□□□ -1.64
NSMCE2-208	ENST00000520866	RPL32	P62910	135 aa	Known RBP	4.79	□□□□□ -1.64
NSMCE2-208	ENST00000520866	HBB	P68871	147 aa		4.79	□□□□□ -1.64
NSMCE2-208	ENST00000520866	MRPS36	P82909	103 aa	Known RBP	4.79	□□□□□ -1.64
NSMCE2-208	ENST00000520866	OCC1	Q8TAD7	63 aa		4.79	□□□□□ -1.64
NSMCE2-208	ENST00000520866	C20orf78	Q9BR46	151 aa		4.79	□□□□□ -1.64
NSMCE2-208	ENST00000520866	LPA	P08519	4548 aa		4.78	□□□□□ -1.64
NSMCE2-208	ENST00000520866	FAM168B	A1KXE4	195 aa		4.78	□□□□□ -1.64
NSMCE2-208	ENST00000520866	GAGE10	A6NGK3	116 aa		4.78	□□□□□ -1.64
NSMCE2-208	ENST00000520866	HIGD1C	A8MV81	97 aa		4.78	□□□□□ -1.64
NSMCE2-208	ENST00000520866		K7EN84	100 aa		4.78	□□□□□ -1.64
NSMCE2-208	ENST00000520866	TSPAN13	O95857	204 aa		4.78	□□□□□ -1.64
NSMCE2-208	ENST00000520866	RIG	Q13278	110 aa		4.78	□□□□□ -1.64
NSMCE2-208	ENST00000520866	LCE1F	Q5T754	118 aa		4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms